Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01018 ATGGACAATAAGACAAATGTGCTGATGAAAAGATATGAAATAGGAAGATTGCTAGGCCAGGGAACCTTTGCAAAGGTCTACTATGGAAGGAGTTTGAGAACTAATCAAAGTGTCGCGGTTAAGGTGATAGACAAAGAGAAGATTTTTAAGGTTGGCATTTATGATCAGATCAAGCGAGAAATATCCGTTATGAGACTTGTTCGACACCCTAATGTTCTACGGCTGTATGAAGTCATGGCGACTAAAATGAGGATTTATTTTGTTCTGGAATATGCGAAAGGCGGTGAGCTTTTCAACAAGGTTGTTAGGGGAAGGTTCAAGGAGGAACTTGCTTTGAAATACTTTCAGCAGCTGATAAATGCTGTTGAGTTCTGTCACAGTAGGGGAGTTTATCATCGGGATATTAAACCGGAGAACTTATTGCTCGATGAGAATGAGAATCTTAAGATTTCTGATTTTGGTTTAAGTGCCCTTGCTGAATCCAAGCGACAAGATGGACTACTCCATACTACTTGTGGCACACCAGCTTACGTCGCCCCTGAAGTGATTAGTAGGAAAGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGGGTTGTGTTGTTTGTCATTTTGGCAGGTTATCTTCCTTTTCATGATGCAAATTTAATGGCTATGTATAGGAAGATTGAAAAAGCAGATTATAAATGCCCGAATTGGTTTCCTCCTGAGGTTCGGAGGATGCTTTGCCGGATTTTGGATCCAAATCCCTATACCAGGATGTCCATTGCGAAGATAAAGGAAAACTCTTGGTTCAAACGAGGATTGACCTCCAAACGATGCAAAACCCAGACAGATGGCAAGAAAGCGTGTCTTCCTGACAATGTCGTTTCTTGGCCGTGCGAGACTAGTTTGGCTGCAGAGGGAGAGCTCAAAGAACTTAAACCAGCCAACTTGAATGCTTTCGATATAATCTCACTTTCGGAAGGATTTGATCTGACTGGATTGTTTGAAGACAAATCCCAGAAGATGGAAGCAAGGTTTACTTCTAAACAACCAGCAAATGTCATTATTTCTAAGCTGGAAGAAATCGCCAAGCTTTTACGACTGAGGGTGCAGAAGAAGGAAGCCGGTCTGGTAAAATTTGAGGCACAACAAGAAGGTAGAAGGGGGGTTTTGTCCATTGATACAGAGATCTTTGAAGTTACTCCATCATTTTACATGGTGGATGTGAAGAAATCAAGTGGAGATACATTGGAATATCAGAGAGTACTAAAAGAAGATATAAAGCCTGCACTTAAGGATATTGTATGGGTTTGGCAAGGAGAGCAACAAGAGCAGCCTAGGCCGGAACAGCATAGACAAGCAGATGATGATGAGCAGCAACAGCAGCAGCAAGAGGAGAATCGATAG 1395 42.01 MDNKTNVLMKRYEIGRLLGQGTFAKVYYGRSLRTNQSVAVKVIDKEKIFKVGIYDQIKREISVMRLVRHPNVLRLYEVMATKMRIYFVLEYAKGGELFNKVVRGRFKEELALKYFQQLINAVEFCHSRGVYHRDIKPENLLLDENENLKISDFGLSALAESKRQDGLLHTTCGTPAYVAPEVISRKGYDGAKADIWSCGVVLFVILAGYLPFHDANLMAMYRKIEKADYKCPNWFPPEVRRMLCRILDPNPYTRMSIAKIKENSWFKRGLTSKRCKTQTDGKKACLPDNVVSWPCETSLAAEGELKELKPANLNAFDIISLSEGFDLTGLFEDKSQKMEARFTSKQPANVIISKLEEIAKLLRLRVQKKEAGLVKFEAQQEGRRGVLSIDTEIFEVTPSFYMVDVKKSSGDTLEYQRVLKEDIKPALKDIVWVWQGEQQEQPRPEQHRQADDDEQQQQQQEENR 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32525053 32526447 - BLOR20070 Blo13g01018 69413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01018 464 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g01018 464 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Blo13g01018 464 PANTHER - 2 446 - -
Blo13g01018 464 Gene3D Kinase associated domain 1, KA1 311 433 - -
Blo13g01018 464 MobiDBLite consensus disorder prediction 441 464 - -
Blo13g01018 464 Pfam NAF domain 310 368 IPR004041 GO:0007165
Blo13g01018 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Blo13g01018 464 CDD CIPK_C 314 428 - -
Blo13g01018 464 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Blo13g01018 464 Gene3D Transferase(Phosphotransferase) domain 1 2 310 - -
Blo13g01018 464 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Blo13g01018 464 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g01018 464 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo13g01018 464 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 446 - -
Blo13g01018 464 MobiDBLite consensus disorder prediction 437 464 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01518 Blo-Chr3:42071254 Blo13g01018 Blo-Chr13:32525053 2.94E-138 dispersed
Blo11g00700 Blo-Chr11:8260763 Blo13g01018 Blo-Chr13:32525053 0 dispersed
Blo12g01056 Blo-Chr12:28344522 Blo13g01018 Blo-Chr13:32525053 9.07E-168 dispersed
Blo01g00856 Blo-Chr1:15824251 Blo13g01018 Blo-Chr13:32525053 7.15E-173 transposed
Blo08g00526 Blo-Chr8:14915343 Blo13g01018 Blo-Chr13:32525053 6.27E-176 transposed
Blo14g00740 Blo-Chr14:19882986 Blo13g01018 Blo-Chr13:32525053 9.17E-107 transposed
Blo14g00880 Blo-Chr14:33049032 Blo13g01018 Blo-Chr13:32525053 1.33E-174 transposed
Blo13g01018 Blo-Chr13:32525053 Blo14g00057 Blo-Chr14:365914 1.22E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84644 PF00069 Pkinase 3.50E-72 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01018 - K07198 cpap:110823886 657.136