Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01023 ATGGCTGCTACTCCAAAATGCTATCTTTCTTTCTTCATCGTCTTTGCTCTGGCTGTTGTAAACCCTACGCACGCTCAACTCACTCCTCACTTCTACACAACTGTCTGCCCCCAGGCTTTGCCTACCATTCGTAAAGTTGTTGCTTCAGCTATTCGTAGCGAGGCTCGCATGGGTGCTTCGCTTCTTCGCCTTCACTTCCATGATTGTTTTGTCAACGGATGCGATGGATCAATTTTGCTCGACGACACCGCCACCTTCACCGGCGAGAAGACAGCCCTTCCGAACATCAACTCTGTTAGAGGATTCGAAGTGGTGGATCAGATAAAAACAGCAGTTAATAAGGCGTGCGGCAATGTTGTGTCTTGTGCAGATATCTTAGCCGTTGCAGCTCGAGACTCTGTCAATCTGTTGGGAGGTCCATGGTACAACGTTTTGGTGGGTCGAAGAGACGCAAGAACCGCAAGCAAAAACGACGCGAACAACAACCTTCCGCCACCGTTCTTCAACTTATCGCAACTCGTTTCCAACTTCCAATCTCACGGCCTCGACCTGACGGACCTGGTTGCGCTGTCCGGTGGTCACGTCATTGGACTGGCTCGCTGCGCCACTTTCCGAGCAAGGGCTTACAACGATACCAACATAGACCGTAAATTCGCCGCCTCCTTGCGGAAGAGCTGCCCTCAAACCGGAGGAGACTCCACCACAAAGCCATTGGATAGAACCCCAAATTCGTTTGACACCGCTTACTTCAGTGCGTTGTTGGGCAAAAAGGGTCTGCTCCATTCTGATCAGCAGCTCTTCAAGGGTGATGGCAGCGGCACGGACGGCCTGGTTCGTCAATACAACAGTTATCCCGGTCAGTTTTTTAAAGATTTCGGCAATTCTATGATCAAGATGGGTAACTTGAAACCTCTCACCGGAAGTAATGGAGAAATCCGGCGCAACTGCAGGGTTACTGTTGGGAAATCGCCTGACCCGCCATTGAAGACTATGCAGAGACTTTCTTCTCTCACTAACCACCATGGGAAAAGTTATCAAGCTATGAATCTGCTCCAACAACTTCACCAAAATGGGGTCAAAATCACCAAGTTTCTTCTGTCTTCGGCTCTCAAAGCTTGTGGTAGTATTGCAGCAATCGAGGGAGGTGAGCAGTTTCATTGCATGATTTTCCGAACGGGATTTCACGCCGACATTCGTCTAATGACGTCTCTTATTGACATGTACTCTAAATGCAGTCGCATCAGGGAGGCGCACCAGGTGTTTGCTGAAATTCCGCAAAGAGATGTAATTGCGACTAACAGCATGATTTATGGGCTCTGTCGCTGCAATCAAACAGATGACGCCATTAAATTATTCAATAACATGACAGACAGAGACGTTGGGTCTTGGAATACACTGATTTCTGGCTTGGGCCATAACTGCGAAGGGAAGATGGGATTAGCTCTCTTTGACAGAATGAGATTAGATGGCCATGAAGTAGATGTTATGACAATGGTCAGCGTTCTTTCTCTCTGTGCTGATATTGCAGCGCTCATCAATGGCAGAAAGGTGCATAGTTTAGTGATTAAATATGGGATGGAGCCATTTTTGCCGGTTGGGAATGCTCTGACTGACATGTATGCAAAATGCGGGATAATGGCCGATGCATATAACCATTTCGAGAGTATGCTTCATCGGAATGTCGTTACCTGGACTTGTTTGATAGCCGGCTATGGAAAAAATGGCTACGGATTGGAAGCTATGAGGGCATTCTTTGCAATGGAAAGGGAGGGTGTGTCTCCCAACAAAATCACCTTCTTGGCTACTCTCCACGCATGCGGCCATGCAGGGCTCGTAGATGAAGGATGGGCCAATTTCAAGACGATGGTGCAGAAGTACTCCATCTCGCCCATGATGGAGCACTACACATGCACAATAGATCTACTAGCCAGAGCAGGAAGGTTGATGGATGCCTATGATTTCATCCTGAGAATGCCAGTTGAGCCGGAGTCGAAGATTTGGACGGCACTTTTAAGCTCTTGTTGCTTCCACAGAGACAAGGCAATGGCAAGGACAGTGGGAGAAAAATTACTCAAGTTAAAACCCGTCGAGTCTGGAGCCTACATGTTGTTATCAAGTGTCTACGGACTTGACGGGGATATGGAGGGTGTAGCAAAAGTGAGAAAGATGATGCTCGAGCGAGGAATAAAGAAAGAGACGGCTTGTACGTGGATTGAGATCGACGGATTGGTTCATAGCTTCGAGTCAGGAGATAGATCGCATCCTCTGAGCAAGGAGATCTACTACTACTTGGACAATCTACTCCACAGCCAATCACAAACAATAAGAGCAGAGTAG 2337 47.84 MAATPKCYLSFFIVFALAVVNPTHAQLTPHFYTTVCPQALPTIRKVVASAIRSEARMGASLLRLHFHDCFVNGCDGSILLDDTATFTGEKTALPNINSVRGFEVVDQIKTAVNKACGNVVSCADILAVAARDSVNLLGGPWYNVLVGRRDARTASKNDANNNLPPPFFNLSQLVSNFQSHGLDLTDLVALSGGHVIGLARCATFRARAYNDTNIDRKFAASLRKSCPQTGGDSTTKPLDRTPNSFDTAYFSALLGKKGLLHSDQQLFKGDGSGTDGLVRQYNSYPGQFFKDFGNSMIKMGNLKPLTGSNGEIRRNCRVTVGKSPDPPLKTMQRLSSLTNHHGKSYQAMNLLQQLHQNGVKITKFLLSSALKACGSIAAIEGGEQFHCMIFRTGFHADIRLMTSLIDMYSKCSRIREAHQVFAEIPQRDVIATNSMIYGLCRCNQTDDAIKLFNNMTDRDVGSWNTLISGLGHNCEGKMGLALFDRMRLDGHEVDVMTMVSVLSLCADIAALINGRKVHSLVIKYGMEPFLPVGNALTDMYAKCGIMADAYNHFESMLHRNVVTWTCLIAGYGKNGYGLEAMRAFFAMEREGVSPNKITFLATLHACGHAGLVDEGWANFKTMVQKYSISPMMEHYTCTIDLLARAGRLMDAYDFILRMPVEPESKIWTALLSSCCFHRDKAMARTVGEKLLKLKPVESGAYMLLSSVYGLDGDMEGVAKVRKMMLERGIKKETACTWIEIDGLVHSFESGDRSHPLSKEIYYYLDNLLHSQSQTIRAE 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32580914 32585657 + BLOR20075 Blo13g01023 69418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01023 778 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Blo13g01023 778 Gene3D Peroxidase, domain 2 164 299 - -
Blo13g01023 778 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 428 462 IPR002885 -
Blo13g01023 778 ProSiteProfiles Plant heme peroxidase family profile. 26 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 Pfam E motif 677 739 IPR046848 -
Blo13g01023 778 Gene3D - 31 317 - -
Blo13g01023 778 Pfam PPR repeat 433 456 IPR002885 -
Blo13g01023 778 Pfam E+ motif 744 767 IPR046849 -
Blo13g01023 778 CDD secretory_peroxidase 26 319 IPR033905 GO:0004601|GO:0042744
Blo13g01023 778 Pfam Peroxidase 44 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 Gene3D Tetratricopeptide repeat domain 577 753 IPR011990 GO:0005515
Blo13g01023 778 Gene3D Tetratricopeptide repeat domain 333 487 IPR011990 GO:0005515
Blo13g01023 778 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 336 769 - -
Blo13g01023 778 SUPERFAMILY Heme-dependent peroxidases 26 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo13g01023 778 TIGRFAM PPR: pentatricopeptide repeat domain 562 595 IPR002885 -
Blo13g01023 778 TIGRFAM PPR: pentatricopeptide repeat domain 462 495 IPR002885 -
Blo13g01023 778 TIGRFAM PPR: pentatricopeptide repeat domain 433 460 IPR002885 -
Blo13g01023 778 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 560 594 IPR002885 -
Blo13g01023 778 PANTHER - 336 769 - -
Blo13g01023 778 Pfam PPR repeat family 559 606 IPR002885 -
Blo13g01023 778 Pfam PPR repeat 462 490 IPR002885 -
Blo13g01023 778 Pfam PPR repeat 402 428 IPR002885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00974 Blo-Chr13:32156410 Blo13g01023 Blo-Chr13:32580914 2.89E-102 dispersed
Blo13g01023 Blo-Chr13:32580914 Blo14g00060 Blo-Chr14:451366 1.22E-162 dispersed
Blo13g01021 Blo-Chr13:32563600 Blo13g01023 Blo-Chr13:32580914 1.26E-108 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01023 - - pavi:110753865 568.926