Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01027 ATGGCCGCAGATGCCACAGAGACGGCGACCAAGTTTCAAAGCCAGGACTTTCGGCCAGTCCTTTCTCCTCCTGATTTCCATCCTGAAGTTACGGTTTCGACCCACGATGGTCTCCACTTCTGGAAATTCATGATTGCAGGTTCAATCGCTGGATCGGTCGAGCACATGGCTATGTTTCCTGTCGACACGGTCAAGACTCATATGCAAGCTCTTAGGTCATGTCCAATGAAATCGGTTGGCGTGCGCCAAGCCCTCCTGTCTATTTTGAATTCCGAGGGACCAGCTGGGCTCTATCGCGGGATCGGGGCAATGGCTCTCGGCGCTGGACCAGCCCACGCAGTGTATTTTTCAGTTTACGAATTTTGTAAGAAATTCTTCTCGGGAGGGAACGCCAACAATTCAGCTGCCCATGCTATTTCCGGCGTGTTTGCTACGGTTTCTAGTGACGCAGTCTTTACGCCGATGGACATGGTGAAGCAGAGATTGCAGTTGGGAAGTAGTCCCTACAATGGAGTTTGGGATTGTGTAAAGAGGGTTCTTCGGGAAGAAGGCTTTCGAGCATTTTATGCGTCCTATAAGACAACTGTCTTGATGAATGCCCCTTATACTGCTGTACATTTCACAACTTACGAGGCTGCAAAGAGGGCTTTGATGGAAATTTCGCCTGAGAGTGTAAGTGATGAGCGGTGGGTTGTTCATGCCACTGCCGGAGCTGCAGCTGGTACCTCTGCCGCTGTTGTCACAACGCCCCTTGATGTTGTTAAAACTCAACTACAGTGTCAGGGTGTATGCGGATGTGATAGATATAAAAACGGATCGATACGGGATGTCATCGGGAGCATAGTTAGCAAGGATGGAGCAAGAGGGCTTATGAGGGGATGGATTCCTAGGATGCTTTTCCATGCTCCTGCAGCAGCTATATGCTGGTCTACCTATGAAGCCTGCAAATCATTCTTCCAAGAACTCGACGAGAAATGA 978 49.59 MAADATETATKFQSQDFRPVLSPPDFHPEVTVSTHDGLHFWKFMIAGSIAGSVEHMAMFPVDTVKTHMQALRSCPMKSVGVRQALLSILNSEGPAGLYRGIGAMALGAGPAHAVYFSVYEFCKKFFSGGNANNSAAHAISGVFATVSSDAVFTPMDMVKQRLQLGSSPYNGVWDCVKRVLREEGFRAFYASYKTTVLMNAPYTAVHFTTYEAAKRALMEISPESVSDERWVVHATAGAAAGTSAAVVTTPLDVVKTQLQCQGVCGCDRYKNGSIRDVIGSIVSKDGARGLMRGWIPRMLFHAPAAAICWSTYEACKSFFQELDEK 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32612166 32614050 - BLOR20079 Blo13g01027 69422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01027 325 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
Blo13g01027 325 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Blo13g01027 325 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Blo13g01027 325 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Blo13g01027 325 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Blo13g01027 325 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Blo13g01027 325 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Blo13g01027 325 PANTHER MITOFERRIN-1-RELATED 5 324 - -
Blo13g01027 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Blo13g01027 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Blo13g01027 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 324 - -
Blo13g01027 325 Gene3D Mitochondrial carrier domain 130 325 IPR023395 -
Blo13g01027 325 Pfam Mitochondrial carrier protein 134 219 IPR018108 -
Blo13g01027 325 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Blo13g01027 325 Pfam Mitochondrial carrier protein 228 320 IPR018108 -
Blo13g01027 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01202 Blo13g01027 CCT
Blo03g01202 Blo13g01027 ECH
Blo13g01027 Blo14g00065 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00165 Blo-Chr10:1963561 Blo13g01027 Blo-Chr13:32612166 3.59E-06 dispersed
Blo13g01027 Blo-Chr13:32612166 Blo19g00317 Blo-Chr19:20543812 5.08E-11 dispersed
Blo11g00315 Blo-Chr11:2550858 Blo13g01027 Blo-Chr13:32612166 3.23E-159 transposed
Blo13g01027 Blo-Chr13:32612166 Blo14g00065 Blo-Chr14:491162 0 wgd
Blo13g01027 Blo-Chr13:32612166 Blo03g01202 Blo-Chr3:38308074 2.92E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01027 K15113 - csv:101215924 532.332