Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01039 ATGAGAAAGGAGTTTAATAAACAAGATTATGCTTCTGTTTTGCTTGAATTATCAGCAGCAAATGATCTGATTGGATTCAAAAGTGCTGCGGAAGAAAAGGGTTATGGTGTTGATGAGGCAAGTATGTGGTATGGCAGGAGACTTGGCTCGAAAAAAATGGGATACGCGGAAAGAACTCCTCTAATGATTGCCTCCATGTTTGGAAGCGTAGATGTGGTAATCTATGTCCTTAAATCTGGCCGTGTTAATATCAATCGAGCTTCTGGTTCAGATGGGGCAACAGCCCTCCATTGTGCTGTTGTTGGCTGCTCAGCAGCTTCATCTCATGTTGTTCGGCTTTTGCTTGATGCTTCAGCTGATATTAATGCTGTGGATACAAATGGAAAACAGCCAATTGATTTGGTTTTTTCTTATAAGTCGGTCTATAATTTGATGCAAAAATCACTCGAAGCAGTGCTAAAGGGCCATTTTGATGAAGAACCGACTGGTTCATATGACCGAGTAATTAACGATATGGGAGAGGAGATTGTGACGACTTCATTGTTGAAGGATGGGAGTGAAAAGAAAGAGTATCCAGTCGATCTTTCTCTTCCAGACATCAACGATGGGATTTACAGTACCAACGAGTTTCGAATGTTTACATTTAAAGTCAGACCCTGCTCCAGAGCTTACTCTCATGATTGGACTGAATGCCCATTCGTACACCCGGGTGAAAATGCAAGGCGAAGAGATCCGAGGAAATACCATTACAGCTGCGTTCCTTGCCCAGAGTTTAGAAAGGGCTGCTGTCAGCAAGGAGATGCTTGTGAGTATGCCCATGGAATTTTCGAGTGTTGGCTTCATCCTGCTCAGTATCGAACCAGACTCTGTAAAGATGAAGTTGGATGTGGAAGAAAGGTCTGTTTTTTTGCACACAAGCCAGAAGAGCTTCGGCCCTTGTATGCTTCCACTGGTTCAGCCGTTCTGTCGCCGAGATCTTTGTCAGCTGGTGATTCTAAAGATTTGGCCTTAATGAGTCCACTTGCCCTTGGTTCAATACCCACTTCACCCTCCAGGGCCTCTTCTGCCTTGTGGCAAATTCTTCCTGATCGTGTTCCCCCTCCCATCTTGCAGCTACCGACAGGGAGATCGAATGCTGCACAGATCGATGAACTCAGACGACAGCAAGTTATGGATGAGATATCAAGCCTCTCCTCCCTGTCAAGTTGGGCTAATGGCTCGGTCAGTGCATTACCTTCGTTTATTTCCTCTGGAAGCAAGTTTTTGGAAGGGAATAGGCTTGGGGGAGTGAAGCCTAATGACCTTGAGGATCTTTTTGGGCAGTTAAATTTTGGAATTTCTCCTCAATTCCGAGGAGGCTCGATGGAAAATCATCTCCAATCAAGATACCCCTGCAGTATTGCTTCGTCTCCTGTGAAGGGGTCAACTTCATTTGGGTTCAACACATCTATAGCTTCTGAAGGTGCAGTTTTGAGCTTAAGATCTGCTGGCTTTGCAACTCGAAGCCAGAGCTTCGTTGAACGCAGTTCTTTAAATCAAAATTCTGGAATTTCATCTCCTCCTGGGTTGTCAACAAATTTGCCTTTTCACATGTCGGCTTGGGGCTCCCCCGATGGAAAATTGGACTGGGGGATACAAAGAGAAGAGCTTAGCAAGTTGAGAAAATCTGCTTCTTTTGGCCCCAGAAGCAGTAGAACCACACAGTCAACCTATGATGAGCCAGTCGGGTCTCGCGTGCAGTCCCTGGTCAAAGACACACTGCCAGTGATAGCAGGGCAGTTGGGTTTTGAGGAGCGCCAGAAGCAGGTCTGCCATCTTGATAATGGTGGTTCCGAGACGATGATTCCTCCATCGGTTGAGCAATTCTACGTGGAACAAGATCATCTGGTGGCTTGA 1896 45.78 MRKEFNKQDYASVLLELSAANDLIGFKSAAEEKGYGVDEASMWYGRRLGSKKMGYAERTPLMIASMFGSVDVVIYVLKSGRVNINRASGSDGATALHCAVVGCSAASSHVVRLLLDASADINAVDTNGKQPIDLVFSYKSVYNLMQKSLEAVLKGHFDEEPTGSYDRVINDMGEEIVTTSLLKDGSEKKEYPVDLSLPDINDGIYSTNEFRMFTFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGCCQQGDACEYAHGIFECWLHPAQYRTRLCKDEVGCGRKVCFFAHKPEELRPLYASTGSAVLSPRSLSAGDSKDLALMSPLALGSIPTSPSRASSALWQILPDRVPPPILQLPTGRSNAAQIDELRRQQVMDEISSLSSLSSWANGSVSALPSFISSGSKFLEGNRLGGVKPNDLEDLFGQLNFGISPQFRGGSMENHLQSRYPCSIASSPVKGSTSFGFNTSIASEGAVLSLRSAGFATRSQSFVERSSLNQNSGISSPPGLSTNLPFHMSAWGSPDGKLDWGIQREELSKLRKSASFGPRSSRTTQSTYDEPVGSRVQSLVKDTLPVIAGQLGFEERQKQVCHLDNGGSETMIPPSVEQFYVEQDHLVA 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32736790 32738685 - BLOR20091 Blo13g01039 69434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01039 631 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 8 593 - -
Blo13g01039 631 Gene3D - 249 312 - -
Blo13g01039 631 MobiDBLite consensus disorder prediction 557 574 - -
Blo13g01039 631 MobiDBLite consensus disorder prediction 554 574 - -
Blo13g01039 631 ProSiteProfiles Ankyrin repeat profile. 91 126 IPR002110 GO:0005515
Blo13g01039 631 SUPERFAMILY Ankyrin repeat 54 139 IPR036770 -
Blo13g01039 631 ProSiteProfiles Zinc finger C3H1-type profile. 254 276 IPR000571 GO:0046872
Blo13g01039 631 SMART c3hfinal6 284 307 IPR000571 GO:0046872
Blo13g01039 631 SMART c3hfinal6 249 275 IPR000571 GO:0046872
Blo13g01039 631 Pfam Ankyrin repeats (3 copies) 56 125 IPR002110 GO:0005515
Blo13g01039 631 PANTHER UNKEMPT FAMILY MEMBER 8 593 IPR045234 -
Blo13g01039 631 Gene3D - 5 162 IPR036770 -
Blo13g01039 631 SMART ANK_2a 56 86 IPR002110 GO:0005515
Blo13g01039 631 SMART ANK_2a 91 123 IPR002110 GO:0005515
Blo13g01039 631 ProSiteProfiles Ankyrin repeat region circular profile. 91 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00155 Blo-Chr4:1270802 Blo13g01039 Blo-Chr13:32736790 0 dispersed
Blo04g00230 Blo-Chr4:1804209 Blo13g01039 Blo-Chr13:32736790 0 dispersed
Blo13g01039 Blo-Chr13:32736790 Blo15g00575 Blo-Chr15:11906893 3.74E-50 dispersed
Blo13g00857 Blo-Chr13:31160361 Blo13g01039 Blo-Chr13:32736790 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13206 PF12796 Ank_2 1.20E-07 CL0465 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01039 - - cit:102625565 710.294