Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01047 ATGGAGGTCTCATGGGAGAAAAGCGTAACAGATTCCATTAACACTGTATACCTTCTATTTTCTGCGTATCTTGTGTTTGTTATGCAGCTTGGGTTTGCGATGCTCTGTGCCGGCTCGGTTCGAGCCAAGAACGCCATGAACATAATGCTCACCAACGTGGTAGACGCCGTCGTCGGGAGCATCTCCTACTATCTCTTTGGCTTCGCTTTTGCATTTGGGGATGGCTCTAGTTCTAACCCCTTCATTGGGTCTACCTACTTTGCTCTCGTAGACATCCCCAGCAGCTCCTATGATTACAGCTTCTTTCTTTACCAGTGGGCCTTCGCCATCGCCGTTGCCGGTATAACCAGCGGCTCCATAGCTGAGCGAACGCAGTTTCCTTCCTACCTTATTTTCTCCTCTTTTCTCACTGGGTTTGTGTATCCTGTTGTTGTTCATTGGATTTGGTCCTCCAGTGGGTGGCTCAGCCCGAATTCCAGCGACTTGCTGCTTGATTCAGGCGCAATCGACTTTGCTGGGAGTGGTGTGGTGCATTTGGTAGGTGGAATTGCTGGGCTTTGGGGCTCTTTGATTGAAGGGCCACGGGTTGGGAGGTTTGATGCCTTTGGAAAGCCCGTGCCAATGCGCGGGCATAATGCGACGCTGGTTGTTCTTGGCACATTTTTGCTGTGGTTCGGATGGTTCGGCTTTAACCCTGGTTCGTTTGATAAGATTTTGGTGTCCTACCCAGGCACAACGAATGAGGGTAATTGGACTGGAGTAGGCCGAACTGCAGTGAACACTACATTGGCTGGGTCCGCTGCCGGATTAGCTACTCTTTTCGGCCGGAGATTGCTCATCGGCCATTGGGATGCCTTAGATGTTTGCAATGGGGTACTTGGTGGGTTCGTTGCAATCACTTCAGGCTGTTCCGTAGTCGAACCATGGTCAGCAATCGTATGTGGCTTTGTAGCCGCATGGGTGCTGATTCTGCTCAACATTTTGGCGCTCAAACTGCGGTTTGACGATCCACTAGAGGCCACCCAATTGCATGGTGGGTGCGGGATGTGGGGTGTGATATTCACCGGCTTGTTTGCCAAGAAAGAACTTTTGATTGATGCCTACAACGCCGGAGACACCAGCGTCGTGCGACCCTATGGCCTTTTATTGGGTGGAGGGTGGAAGCTACTGGGAGCTCAAGTGATTGAGGTTTTAGTGATTGTGGGTTGGGTTAGCTTGACAATGGGCCCTCTTTTCTTCGGTCTTCATAAGCTTAGAATTTTGAGGATTTCTGTTGAGGAGGAGGTTGCAGGTCTCGACATATCTAGCCATGGCGGATATGCATACAGCCACACAGAGGAAAGTCAGCCTCGATTTTACGCCGACTACCTACGTCTACAAGCTCAGCATTCTTGA 1395 50.61 MEVSWEKSVTDSINTVYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYLFGFAFAFGDGSSSNPFIGSTYFALVDIPSSSYDYSFFLYQWAFAIAVAGITSGSIAERTQFPSYLIFSSFLTGFVYPVVVHWIWSSSGWLSPNSSDLLLDSGAIDFAGSGVVHLVGGIAGLWGSLIEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPGTTNEGNWTGVGRTAVNTTLAGSAAGLATLFGRRLLIGHWDALDVCNGVLGGFVAITSGCSVVEPWSAIVCGFVAAWVLILLNILALKLRFDDPLEATQLHGGCGMWGVIFTGLFAKKELLIDAYNAGDTSVVRPYGLLLGGGWKLLGAQVIEVLVIVGWVSLTMGPLFFGLHKLRILRISVEEEVAGLDISSHGGYAYSHTEESQPRFYADYLRLQAQHS 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32778913 32780307 - BLOR20099 Blo13g01047 69442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01047 464 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 462 - -
Blo13g01047 464 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo13g01047 464 SUPERFAMILY Ammonium transporter 10 423 - -
Blo13g01047 464 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo13g01047 464 Gene3D Ammonium transporter AmtB like domains 3 458 IPR029020 -
Blo13g01047 464 TIGRFAM amt: ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo13g01047 464 PANTHER AMMONIUM TRANSPORTER 1 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00430 Blo-Chr11:3750084 Blo13g01047 Blo-Chr13:32778913 0 dispersed
Blo13g01047 Blo-Chr13:32778913 Blo07g01055 Blo-Chr7:30354247 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01047 K03320 - pvy:116129597 783.097