Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01063 ATGGCGGATACCTGCTGCGGCGTGTTGACTGAGGGGGACAAGTCGTCTCGTGAGGCGAGGAGGAGGAGGATGGAGATCAGGAAGTTTAAGTTTGGTGCTGATATGTCTCTGTCGGACGCCGAGAGCGAGCAGAAGCGGCAGAAGCTTGAGGTTTGTTCCCGATCGTTGTCTAGAGACTGTGAGCGTCAGGTGGAGAACTGTGTTTCCGATGATGGAAAACGTGACGGGGTGTTAGATGATAGAAGAACTGAGAATAAGGAGATCTCATGTTCGAGAGAGACGTTGGCTGGTGAAGTTCCGATGATGTGTCAGTCTGCTGCCGCTGTACTTGTTAGACCAAAAGTTTCGGATGACTTTCCAAAGTTTGGGACTGCTTCCGTGTGCGGAAGGCGGAGAGACATGGAGGACGCTGTCTCTATTCATCCAGCGTTTTTCCGACGAGATTTCGAAACGACATCTTCTTCGTTTCACTATTTCGGTGTGTACGACGGCCATGGCTGCTCTCATGTTTCCACCAGGTGTCAAGAACGACTGCATGTGCTCGTGAAAGAAGAGCTGGAGAAAACGGAGCCGCCGGCGATTGAGTGGAAAAAGTTAATGGAGAGAAGTTTCAGGAAAATGGACGAGGAGGTAGTGGCGTTAAATGTTAGCGATGTAGCTCCGAAGTGCAGGTGCGAGCTACAGTCACCGGAGTGCGACGCTGTCGGATCTACGGCTGTTGTTTCAGTTCTTACATCAGACAAGATAATCATCGCGAACTGCGGCGATTCGAGAGCAGTGCTTTGTCGTAACGGACACGCCATACCTCTTTCTTCCGACCACAAGCCGGATCGTCCAGACGAGCTGAATCGGATCTGCGCCGCCGGCGGACGAGTAATCTACTGGGACGGCCCAAGAGTTCTCGGAGTTCTAGCCATGTCCAGGGCTATAGGTGATAACTACCTCAAGCCATACGTGAGCTGCGAGCCAGAGGTAACGTCGAGTGATCGAACGGCGGAAGACGAATGTCTCATACTGGCCAGCGACGGGCTGTGGGACGTGGTGTCGAACGAGACGGCGTGTGGAGTGGCGCTCATGTGCCTGCGAGGGAAGAAGGCAAAGGGTGCGTTGCGGAGGAGGAGAGAGAGAAGAGACAGCGGGGGCGAGATGTGGGACGAGGCATGTATGGAGGCGTCCATGTTGCTCACGAAGCTGGCGTTGGCCAGGCGCAGTTCTGACAACGTGAGCGTGGTGGTGGTCGATCTGAGGAGGGACGCGTGGCCTTTGTAA 1269 54.29 MADTCCGVLTEGDKSSREARRRRMEIRKFKFGADMSLSDAESEQKRQKLEVCSRSLSRDCERQVENCVSDDGKRDGVLDDRRTENKEISCSRETLAGEVPMMCQSAAAVLVRPKVSDDFPKFGTASVCGRRRDMEDAVSIHPAFFRRDFETTSSSFHYFGVYDGHGCSHVSTRCQERLHVLVKEELEKTEPPAIEWKKLMERSFRKMDEEVVALNVSDVAPKCRCELQSPECDAVGSTAVVSVLTSDKIIIANCGDSRAVLCRNGHAIPLSSDHKPDRPDELNRICAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTSSDRTAEDECLILASDGLWDVVSNETACGVALMCLRGKKAKGALRRRRERRDSGGEMWDEACMEASMLLTKLALARRSSDNVSVVVVDLRRDAWPL 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32859847 32861479 - BLOR20115 Blo13g01063 69458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01063 422 SUPERFAMILY PP2C-like 120 416 IPR036457 -
Blo13g01063 422 Gene3D - 110 419 IPR036457 -
Blo13g01063 422 SMART PP2C_4 109 413 IPR001932 -
Blo13g01063 422 CDD PP2Cc 121 369 IPR001932 -
Blo13g01063 422 ProSiteProfiles PPM-type phosphatase domain profile. 121 415 IPR001932 -
Blo13g01063 422 Pfam Protein phosphatase 2C 123 408 IPR001932 -
Blo13g01063 422 ProSitePatterns PPM-type phosphatase domain signature. 158 166 IPR000222 GO:0043169
Blo13g01063 422 PANTHER ALPHABET, ISOFORM E-RELATED 69 418 - -
Blo13g01063 422 PANTHER PROTEIN PHOSPHATASE 2C 37 69 418 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01226 Blo13g01063 CCT
Blo03g01226 Blo13g01063 ECH
Blo13g01063 Blo14g00107 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00458 Blo-Chr7:9603024 Blo13g01063 Blo-Chr13:32859847 1.20E-83 dispersed
Blo09g00035 Blo-Chr9:465676 Blo13g01063 Blo-Chr13:32859847 2.45E-06 dispersed
Blo13g01063 Blo-Chr13:32859847 Blo02g01149 Blo-Chr2:43050708 1.42E-79 dispersed
Blo13g00881 Blo-Chr13:31347934 Blo13g01063 Blo-Chr13:32859847 1.66E-130 wgd
Blo13g01063 Blo-Chr13:32859847 Blo14g00107 Blo-Chr14:745207 0 wgd
Blo13g01063 Blo-Chr13:32859847 Blo03g01226 Blo-Chr3:38515727 2.70E-148 wgd
Blo13g01063 Blo-Chr13:32859847 Blo03g01151 Blo-Chr3:37916954 9.30E-153 wgd
Blo13g01063 Blo-Chr13:32859847 Blo04g00122 Blo-Chr4:1023845 3.41E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01063 K14497 - zju:107410893 498.819