Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01071 ATGGATCCACAAATTCCTTTGTTCTCAGATTCGGGTAATGGGTTTGAAGTAGATTACGATAATTTCGCATCTTCTTTTCCAAATTTAGCGAATGATTTCAAATTCGAAGTTCCATCCCCCGATCTAAACTTCATGGAAAATTCCCTTTTTCTTCACGATCTGGATCAAGTTGAGCTTGCTCCACTCGTAAGTGCGAGCTCTGCCGAACTATCTTCTGTTGCATCGGGGAGCTCGAACTCAGACGGAGGCTCTTTGCCCTCGCCTGCAAGCATCACCGCCGGTGTTGACTCTCCTTCAGACGATAGTGACTTCTCTGAAACTGTCAAGTACATAAACCAGATACTCATGGAAGAGAACATAGAGGATAAGCCTTGTATGTTTTATGATCCTTTGGGGCTGAAAGATACGGAGAAATCGTTCTACGATGTTCTAAACAAGAGCTACCCTTCTTCCCCAAACCAGCCTTCACTGAGTCCTGAAGATGCTCTCTCTGGAATGAGCAGTGATCATGGAAGTAATGGTAGCAGTACGAATCTCAGCAACTATGTGGATCGCCAATGGATGACTAATTCTGGAGAGACTAACCAGCAGCACTTATCTCAGACATCTTTGGCAGGCGAATCCATCTCTCTTTCCAAAGTTGAGTCTAGTTCACAGGTTCTTGGTCATAATCAAAACAGTCTGGGATTCAATGGCGAGGAGCTAGTTTCTCAGCTACTGGGTCAGAATATTTTTAGCAATAGTGAATCAGTCTTACAGTTCAAGAAAGGATTAGAAGAGGCTAGTAAGTTTCTGCCTGAAGGCAGTCAACTATTTTCAAATTTGGGGAGCAGCTTGACGAAGGGAGAGGGTGCACAGATGAGTAATGCGTTAGAGAAGGCTAAGATTAAGAAAGAGAATTCATCAAAAACTTCAGAAGAGACGAATTCTCCAAAAAATACGAAGGGAAGGAAGAATCGTGAAAGGGAAGATGAAGACATGTATTCAGAAGAAGGGCGAAGCAACAAGCAATCGGCAGTTTATGTCGACGAGAGTGAGCTATCGGAAATGTTTGATAGAGTGTTGCTTGATGGAGAGGGGAAAAAATATAAAGGACTATGCAATGGAAAAGAAAAGCCACAAGATGAAGCATATAAGAAAGGTCAGATGAAGAAAGAGCCTCAAACAGCAAATGGAGGAAGAGCTCGAGGAAAGAGACAGGGAAATAAAAAGGAAAATGTGGATTTGACGACCCTTTTGATCCAGTGCGCTCAATCTGTATCGAATGATGATAGAAGGACAGCTAACGAATTGATTAAGCAGATAAGGCTGCATTGTTCGCCCTTTGGGGATGGCTCCCAGAGATTAGCTCATTACTTTGCCAACGCTCTCGAGGCCCGGTTGGCAGGGACTGGGACCGGAACCAAATTATTCTTCGCTTCCTTAGCTTCCAGGAAGATTTCGGCCGTTGATATGTTGAAATCTTACCAAGATCACCTTTTGGCCTGTCCTTTCAAGAAGATTTCCTTTTATTTTGCGAACAAAATGATTTTTAAGTTTGCGGAGAAAGCAGAAACTCTTCATATCATAGACTTCGGCATTCTTTATGGATTTCAATGGCCAATCCTAATTCAGCATCTGTCATTACTTCCCGATGGACCTCCCAAGTTACGAATTACGGGTATAGAGTGTCCTCAACCTGGCTTCCGCCCCATTGAGAGGATCGAGGAGACTGGACGTCGATTGGAAAGATATTGCAACCGATTTAACGTTCCTTTTGAGTATAATGCCATAGCTTCGCATAATTGGGAAACTATCGAGATCAAGGATCTTAAACTCGAAAGCAACGAGGTGATTGCTGTGAACTGTCTGTACAGGTTCAAGAACTTACTTGATGAGACGGTCGAAGAAAACAGTCCGAAGGATGCTCTTCTGAGCCTAATCAGGAAGATCAATCCTAACATTTTTGTGCATTCAATTGTCAATGGATCCCACAATGCCCCATTCTTCATCACACGATTCAGAGAAGCGCTCTTTTACTACTCTGCTATGTTCGATATATTTGACACCAATATATGTCGCGAAAACGAACAACGAATGATGTACGAGAGAGAGTTCTTTGGGCGAGAAGTCATGAACATCGTTGCATGCGAGGGCCTAGAAAGAGTTGAGAGGCCTGAAACGTATAAACAATGGCAGGTGAGGTCCTTGAGGGCGGGTTTCAAACAGCTTCCTCTGGACCAAGAGCTGATGGACAAGTTTCGAAGCAAGCTGAAAGTGAAATATCACAAAGACTTCATACTCGACGAAGACAGCAACTGGATGCTTCAAGGATGGAAGGGCCGGATTGTCTATGCTTCCAGTTGCTGGGTACCAGCCTAA 2361 43.63 MDPQIPLFSDSGNGFEVDYDNFASSFPNLANDFKFEVPSPDLNFMENSLFLHDLDQVELAPLVSASSAELSSVASGSSNSDGGSLPSPASITAGVDSPSDDSDFSETVKYINQILMEENIEDKPCMFYDPLGLKDTEKSFYDVLNKSYPSSPNQPSLSPEDALSGMSSDHGSNGSSTNLSNYVDRQWMTNSGETNQQHLSQTSLAGESISLSKVESSSQVLGHNQNSLGFNGEELVSQLLGQNIFSNSESVLQFKKGLEEASKFLPEGSQLFSNLGSSLTKGEGAQMSNALEKAKIKKENSSKTSEETNSPKNTKGRKNREREDEDMYSEEGRSNKQSAVYVDESELSEMFDRVLLDGEGKKYKGLCNGKEKPQDEAYKKGQMKKEPQTANGGRARGKRQGNKKENVDLTTLLIQCAQSVSNDDRRTANELIKQIRLHCSPFGDGSQRLAHYFANALEARLAGTGTGTKLFFASLASRKISAVDMLKSYQDHLLACPFKKISFYFANKMIFKFAEKAETLHIIDFGILYGFQWPILIQHLSLLPDGPPKLRITGIECPQPGFRPIERIEETGRRLERYCNRFNVPFEYNAIASHNWETIEIKDLKLESNEVIAVNCLYRFKNLLDETVEENSPKDALLSLIRKINPNIFVHSIVNGSHNAPFFITRFREALFYYSAMFDIFDTNICRENEQRMMYEREFFGREVMNIVACEGLERVERPETYKQWQVRSLRAGFKQLPLDQELMDKFRSKLKVKYHKDFILDEDSNWMLQGWKGRIVYASSCWVPA 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 32894745 32897105 - BLOR20123 Blo13g01071 69466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01071 786 MobiDBLite consensus disorder prediction 72 104 - -
Blo13g01071 786 MobiDBLite consensus disorder prediction 364 383 - -
Blo13g01071 786 PANTHER SCARECROW-LIKE PROTEIN 34 70 785 - -
Blo13g01071 786 MobiDBLite consensus disorder prediction 144 180 - -
Blo13g01071 786 MobiDBLite consensus disorder prediction 294 332 - -
Blo13g01071 786 MobiDBLite consensus disorder prediction 364 404 - -
Blo13g01071 786 ProSiteProfiles GRAS family profile. 400 784 IPR005202 -
Blo13g01071 786 MobiDBLite consensus disorder prediction 294 341 - -
Blo13g01071 786 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 785 IPR005202 -
Blo13g01071 786 Pfam GRAS domain family 410 783 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01120 Blo-Chr3:37668724 Blo13g01071 Blo-Chr13:32894745 3.24E-07 dispersed
Blo03g01121 Blo-Chr3:37680209 Blo13g01071 Blo-Chr13:32894745 5.14E-174 dispersed
Blo09g00319 Blo-Chr9:13372989 Blo13g01071 Blo-Chr13:32894745 0 dispersed
Blo13g01071 Blo-Chr13:32894745 Blo15g00454 Blo-Chr15:6842938 2.28E-62 dispersed
Blo13g01071 Blo-Chr13:32894745 Blo04g00113 Blo-Chr4:951849 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13210 PF03514 GRAS 2.70E-112 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01071 - - mcha:111017073 848.966