Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01094 ATGGGTAAAGGAGGGGAAGACTATGGGAGAAAGCACATCTCCGTTGTTGATTCTTCCATTGAAGAAACTTTTCCTGCATGGGCAAAGGATGTTCGAGAATGCGAAGATAAGTACCAAGTCAACCGAAATTTTGGGTTATCATCACAGGACGTAGTCAGGCGAAGAAGGATAAATGGTTGGAATGAATTGGATAAGCATGAAGGCACTTCAATCTTTAAACTGATTTGGGAACAGTTTAATGACACCCTTGTTAGGATATTATTAGTTGCTGCGGTAGTGTCTTTTATTCTTGCCTGGTTTGATGGGGAGGAAGGTGGCGAAATGGAGATTACTGCATTTGTGGAACCACTTGTAATTTTCTTGATCTTGATTGTTAATGCTGTTGTGGGAATTTGGCAGGAGAGCAATGCTGAGAAAGCATTAGAAGCTTTGAAAGAAATTCAATCCAAGCAGGCGACAGTGGTTCGAGATGGTAAACGGATACCAAATTTGCCTGCAAGGGAACTTGTTCCCGGTGATATTGTGGAATTGAGAGTAGGGGATAAAGTGCCAGCTGACATGCGAGTTTTGAGTTTAATCAGCTCTACTTTCCGAATTGAGCAGGGGTCATTGACTGGTGAAAGTGAAGCAGTCAGCAAGACTGTTAAGGTTGTGCCAGAAAATACAGATATACAAGGGAAGAAATGTATGGTTTTGGCGGGGACAACTGTGGTGAATGGGAATGCCATATGCTTAGTTACCCAGATAGGGATGAATACCGAGATAGGGAAAGTACATTCACAGATTCAAGAAGCATCTTTAAGCGAGGAAGATACCCCATTAAAAAAAAAGTTGAATGAGTTTGGAGAGCTTCTAACAATTATTATTGGAGTGATTTGTGCACTGGTTTGGCTTATCAATGTGAAGTACTTCCTCACTTGGGAATACATTGATGGGTGGCCGAGGAACTTTAAGTTCTCATTTGAGAAGTGCACGTATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCTGCTATTCCAGAGGGTCTGCCGGCTGTTATAACAACATGCTTGGCACTTGGCACGCGAAAAATGGCTCAAAAGAATGCACTTGTTCGAAAGTTGCCTAGTGTTGAAACTCTTGGTTGTACGACAGTCATATGTTCTGATAAAACAGGTACTTTGACAACCAATCAGATGGCTGTGGCTAAACTTGTGGCTCTTGGTTCTCGATCTGGTACTATTCGGGAATTTGACGTGGAAGGGACCACATTTAACCCTTTTGATGGAAGAATACACGACTGGCCTAAGAATAGAATGGATGTCAATCTTCAAATGATTGCAAAGATCTGTGCTATCTGTAATGATTCAGGTGTTGAGCAATCTGGACATCAGTTTGTTGCCAATGGTCTGCCCACTGAAGTGGCATTAAAGGTTTTGGTGGAGAAAATGGGACTTCCTGAAGAAATTGTTTCCGGGTCGCATTCTGCTCATAGAGATACACTGCGTTGCTGTCAACAATGGAATGAAATGGAACGGAGGATTGCAACTCTGGAGTTTGATCGAGATCGAAAATCCATGGGAGTGATTGCTTCTTCCAGATCTGGAAATAATTTATTACTAGTGAAGGGCGCAGTGGAAAATCTCTTAGAGCGAAGTTCATATATTCAGTTGCTTGATGGCTCTGTAGTAGAACTGGATGATTATTCAAGGAAGGTTATCGTAGAAAGCCTTCGTGAAATGTCCACTGGTGCATTAAGATGTTTGGGTTTTGCATATAAGGAAGACCTTGCAGAGCTTTCGCAATATAACGGAGATGAAGAGCATCCTGCTCATGAGCTTTTACTTAACCCATCCAATTACTCCTTAATTGAGAGTAATTTGATCTTTGTTGGTTTGGTGGGGCTGAGGGATCCTCCTCGGAAAGAGGTACGACAAGCTATTGAAGACTGCAAAGCTGCAGGAATTCGCGTCATGGTTGTAACAGGGGACAACAAGAATACAGCTGAAGCTATATGCCGTGATATAGGTGTATTTGGATCTCATGAAAATATTATCTCAAAAAGCTTGACAGGAAGAGAATTCATGGATATGGACCATCAAAGTCAGAAAACTCATTTGGCACAAAGTGGAGGGCTTCTGTTCTCTAGGGCTGAACCAAGACATAAACAAGAGATTGTCAGGTTACTCAAGGAGGACAGTGAAGTTGTTGCTATGACCGGAGATGGAGTCAATGATGCACCTGCCCTGAAATTGGCAGATATTGGGATTGCAATGGGCATTGCTGGGACCGAGGTTGCAAAGGAAGCCTCTGACATGGTGCTAGCAGATGATAATTTTAACTCTATAGTTGCTGCAGTTGGTGAAGGAAGATCTATTTACGACAATATGAAGGCATTTATAAGGTACATGATTTCGTCAAATATTGGTGAGGTTGCCTCCATATTTTTGACAGCTGCTCTGGGTATTCCTGAGGGCATGATCCCTGTTCAGCTTCTCTGGGTCAATCTTGTCACAGATGGGCCCCCCGCAACAGCACTTGGATTCAATCCTCCAGACAAAGACATAATGAAGAAGCCCCCACGAAGAAGTAATGAATCATTGATTACTGCTTGGATCTTGTTCCGCTATCTGGTTATCGGACTCTACGTGGGAATAGCAACAGTTGGAGTGTTTGTCATCTGGTACACACATTCTTCATTCTTAGGCATTGACTTGAGTGGGGATGGCCATAGTCTTGTTACCTACTCCCAACTGGCGAGCTGGGATCAATGCCATTCTTGGGAAGGATTCTCTGTCTCGCCCTTTTCAGCTGGCTCTCAAGTCTTCAATTTCGACTCGAATCCATGCGATTATTTTCATTCCGGTAAAATCAAGGCCTCTACACTCTCCCTTTCTGTCTTGGTCGCAATTGAGATGTTCAATTCCCTCAATGCACTCTCTGAAGATGGGAGTCTTCTCACAATGCCTCCTTGGGTCAACCCTTGGCTCCTTCTCGCCATGTCCATCTCATTTGCGCTGCACTTTCTCATCCTTTATGTGCCGTTCTTGGCTCAAGTGTTTGGCATAGTACCTCTTAGTTTAAACGAATGGCTCTTGGTGTTGGCGGTTGCCCTTCCCGTGATTATAGTTGATGAAATTTTGAAGCTCGTGGGCAGATCTACGAGTGGATTCAGGATTTCGGGTTCAAGCAAATCATCAAAGCGGAAATCAGAGTAG 3198 43.34 MGKGGEDYGRKHISVVDSSIEETFPAWAKDVRECEDKYQVNRNFGLSSQDVVRRRRINGWNELDKHEGTSIFKLIWEQFNDTLVRILLVAAVVSFILAWFDGEEGGEMEITAFVEPLVIFLILIVNAVVGIWQESNAEKALEALKEIQSKQATVVRDGKRIPNLPARELVPGDIVELRVGDKVPADMRVLSLISSTFRIEQGSLTGESEAVSKTVKVVPENTDIQGKKCMVLAGTTVVNGNAICLVTQIGMNTEIGKVHSQIQEASLSEEDTPLKKKLNEFGELLTIIIGVICALVWLINVKYFLTWEYIDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVALGSRSGTIREFDVEGTTFNPFDGRIHDWPKNRMDVNLQMIAKICAICNDSGVEQSGHQFVANGLPTEVALKVLVEKMGLPEEIVSGSHSAHRDTLRCCQQWNEMERRIATLEFDRDRKSMGVIASSRSGNNLLLVKGAVENLLERSSYIQLLDGSVVELDDYSRKVIVESLREMSTGALRCLGFAYKEDLAELSQYNGDEEHPAHELLLNPSNYSLIESNLIFVGLVGLRDPPRKEVRQAIEDCKAAGIRVMVVTGDNKNTAEAICRDIGVFGSHENIISKSLTGREFMDMDHQSQKTHLAQSGGLLFSRAEPRHKQEIVRLLKEDSEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFNSIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSNESLITAWILFRYLVIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHSLVTYSQLASWDQCHSWEGFSVSPFSAGSQVFNFDSNPCDYFHSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSISFALHFLILYVPFLAQVFGIVPLSLNEWLLVLAVALPVIIVDEILKLVGRSTSGFRISGSSKSSKRKSE 1065
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 33078654 33084247 + BLOR20146 Blo13g01094 69489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01094 1065 SFLD p-type atpase 362 785 IPR044492 -
Blo13g01094 1065 Gene3D - 378 778 IPR023214 -
Blo13g01094 1065 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1046 IPR023298 -
Blo13g01094 1065 Gene3D - 391 632 IPR023299 GO:0000166
Blo13g01094 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo13g01094 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 693 817 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo13g01094 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 232 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo13g01094 1065 Pfam E1-E2 ATPase 147 361 - -
Blo13g01094 1065 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Blo13g01094 1065 PRINTS P-type cation-transporting ATPase superfamily signature 647 657 - -
Blo13g01094 1065 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Blo13g01094 1065 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Blo13g01094 1065 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Blo13g01094 1065 PRINTS P-type cation-transporting ATPase superfamily signature 625 636 - -
Blo13g01094 1065 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Blo13g01094 1065 SUPERFAMILY HAD-like 379 837 IPR036412 -
Blo13g01094 1065 Pfam haloacid dehalogenase-like hydrolase 378 747 - -
Blo13g01094 1065 SFLD C1.7: P-type atpase like 362 785 - -
Blo13g01094 1065 SUPERFAMILY Calcium ATPase, transduction domain A 149 260 IPR008250 -
Blo13g01094 1065 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1064 - -
Blo13g01094 1065 Gene3D - 45 263 - -
Blo13g01094 1065 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1064 - -
Blo13g01094 1065 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 629 IPR023299 GO:0000166
Blo13g01094 1065 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Blo13g01094 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Blo13g01094 1065 Gene3D - 77 1046 - -
Blo13g01094 1065 Pfam Cation transporting ATPase, C-terminus 818 1044 IPR006068 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01094 Blo14g00140 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g01094 Blo-Chr13:33078654 Blo10g00944 Blo-Chr10:28508262 1.78E-108 dispersed
Blo17g00890 Blo-Chr17:29415863 Blo13g01094 Blo-Chr13:33078654 1.19E-36 transposed
Blo17g00891 Blo-Chr17:29424966 Blo13g01094 Blo-Chr13:33078654 5.55E-63 transposed
Blo17g00892 Blo-Chr17:29451457 Blo13g01094 Blo-Chr13:33078654 7.01E-138 transposed
Blo13g01094 Blo-Chr13:33078654 Blo14g00140 Blo-Chr14:1007959 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01094 K01537 - tcc:18590783 1769.59