Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01099 ATGTTGGATCTTAATCTCAATGTCATCTCGAACGATCCGAATCAGAACGATGAATCTATTTTGTTGATCGAGAAGCTTCCTCAGGGTTCGATGAACCAAATGGACGAGTCGGAGACATCAAATTCCTCGATTGTCAATGCGGAGGCCTCGAGCAATGGATGCGACGAAGACTCGTGCTCTACACGCGCCGATGATGTGGTGGTGACATTGAACTTCGACATTTTGAAGGCTGGGAGTGGGAGCGATGTCGTCACGAAGGAGTTCTTTCCCATAACCGGAGCTTCTAGTGTAGTCAAAGGGGATTTTGGGAATTGGCAGGGGCAGAACTCGGCTTCTCCTTCCTCTTCTTCCAGGAAGAACTGGATCGACTTAGCGTTTGATGAGGGAGGCTCAGGAACTGACTTGAGAGTGGTTCAGCCACAACTGCAACCACCGGTGAAAAAGAGCAGGAGGGGACCGAGGTCTCGAAGCTCGCAGTACAGAGGTGTAACGTTCTACCGGAGGACTGGACGATGGGAATCCCATATTTGGTATGTCAACTTGTTTAAATTTTCGATTTCACCAGTTTCTATGGATTGTGGGAAGCAAGTTTACTTAGGTGGATTCGACACTGCACATGCTGCTGCAAGAGCTTATGATCGAGCTGCAATAAAGTTCAGAGGAGTTGATGCAGACATCAATTTTAATCTCAGTGATTATGACGAAGAATTAAAACAGATGAAGAATCTTACCAAGGAAGAATTTGTTCACATACTCCGACGCCAGAGCACAGGCTTTTCAAGGGGGAGCTCAAAGTATCGAGGTGTAACACTGCACAAATGTGGTAGATGGGAAGCTAGAATGGGGCAGTTCCTTGGCAAAAAATGGGGATTGGTGTCGAATAAATTCCTCATGGGTTGGTTAAGTTTTTTCCTTGCTTGGGCAAACAAAAGTATAAGACTGTTTGAAATAAGAAACTGGGGATGGTGTTTTTTTATCATGGAGGTTACCATACTTGCATGCAGGTATATATATCTTGGGCTATGCGACAGTGAAGTAGAAGCTGCAAGGGCCTATGACAAGGCGGCTATCAAATGTAATGGAAGGGAGGCTGTCACGAATTTTGAGCCTAGCACATATGAGGGGGAGATGATGTCAGAGGGTAGTAACCAAGGCTGCGAAAAATTTCTTGATCTAAACTTAGGAATTTCACCTCCTTCACTCGACAATGGTCCTAAGCAAAATGACGGCCTTCAGCTCAACGCTGTTCCCTTTTATGTATGTAATGGAAGGTCTTCAAAGATGGAAAGTCACGCTAATGGAATGGTTGGTGATCCACCTATGGCCATGAAAGGGCTAGTAATGACACCGGAAAACCTGCCCTTTTGGAACAGTGTGCATCCGACTTTCTTTCCCAATGAGGAAAGTTTGTCAGAGAAGAGACTTGCTTTAGGTTCTTCGCGAGGACTTCCCAACTGGGCATGGCAAATTCATGGTCCAGTCGGTGCTACCCAAATGTCACTTTTCTCTACTGCAGCATCATCAGGATTCTCATTTTCGGCTACCCCTTCCCCTGCTGCCATACCTCAATCAAATCCACCCACCTCCACGCCACACAATCTCTGTTTTGCTTCAACCTCATCTGCCTTCAACTCCTCGCCATATCATTTTCAAGTGAAGCCTCCACAAGCACCACCATAA 1680 46.07 MLDLNLNVISNDPNQNDESILLIEKLPQGSMNQMDESETSNSSIVNAEASSNGCDEDSCSTRADDVVVTLNFDILKAGSGSDVVTKEFFPITGASSVVKGDFGNWQGQNSASPSSSSRKNWIDLAFDEGGSGTDLRVVQPQLQPPVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWYVNLFKFSISPVSMDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYDEELKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKWGLVSNKFLMGWLSFFLAWANKSIRLFEIRNWGWCFFIMEVTILACRYIYLGLCDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMMSEGSNQGCEKFLDLNLGISPPSLDNGPKQNDGLQLNAVPFYVCNGRSSKMESHANGMVGDPPMAMKGLVMTPENLPFWNSVHPTFFPNEESLSEKRLALGSSRGLPNWAWQIHGPVGATQMSLFSTAASSGFSFSATPSPAAIPQSNPPTSTPHNLCFASTSSAFNSSPYHFQVKPPQAPP 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 33141228 33144483 - BLOR20151 Blo13g01099 69494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01099 559 SUPERFAMILY DNA-binding domain 328 370 IPR016177 GO:0003677
Blo13g01099 559 SMART rav1_2 265 375 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 SMART rav1_2 159 235 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 MobiDBLite consensus disorder prediction 31 57 - -
Blo13g01099 559 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 289 - -
Blo13g01099 559 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 332 530 - -
Blo13g01099 559 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 1 289 - -
Blo13g01099 559 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 332 530 - -
Blo13g01099 559 ProSiteProfiles AP2/ERF domain profile. 265 369 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 SUPERFAMILY DNA-binding domain 158 230 IPR016177 GO:0003677
Blo13g01099 559 CDD AP2 264 371 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 Gene3D AP2/ERF domain 264 370 IPR036955 GO:0003700|GO:0006355
Blo13g01099 559 Pfam AP2 domain 159 221 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 Gene3D AP2/ERF domain 158 231 IPR036955 GO:0003700|GO:0006355
Blo13g01099 559 PRINTS Ethylene responsive element binding protein signature 266 277 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 PRINTS Ethylene responsive element binding protein signature 351 371 IPR001471 GO:0003700|GO:0006355
Blo13g01099 559 MobiDBLite consensus disorder prediction 31 58 - -
Blo13g01099 559 ProSiteProfiles AP2/ERF domain profile. 159 229 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00740 Blo-Chr13:30192999 Blo13g01099 Blo-Chr13:33141228 1.39E-56 dispersed
Blo13g01099 Blo-Chr13:33141228 Blo01g01486 Blo-Chr1:54305900 3.07E-38 dispersed
Blo04g01054 Blo-Chr4:14959646 Blo13g01099 Blo-Chr13:33141228 2.28E-73 transposed
Blo05g00626 Blo-Chr5:18666042 Blo13g01099 Blo-Chr13:33141228 4.76E-83 transposed
Blo16g00405 Blo-Chr16:14951967 Blo13g01099 Blo-Chr13:33141228 8.70E-86 transposed
Blo13g01099 Blo-Chr13:33141228 Blo14g00149 Blo-Chr14:1129907 0 wgd
Blo13g01099 Blo-Chr13:33141228 Blo04g00306 Blo-Chr4:2399021 2.87E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13213 PF00847 AP2 5.20E-09 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01099 K09284 - csv:101222024 600.127