Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01100 ATGGCGGCTTCCTTATCTGGAACCTCAATGACGCTTTCCTTCCGCTGTTCATTCATCGGATCGTCACTGGCCGATGATAAGGCAATATTAATTGGAAAAGTTTGTTTACCTGGTTGGAAATGGCGACGTAGAGCCCCGCCGTTTTTGGCTGTTCGCGGCAATGGTAGAAGTAGTGATCTCACCATTGAAACGCCGAGTCTTTCCGAGGGTTTTTCTGGCGGCGACATATGCAAAGATTTAAGCACCCTTCCAAGACCTTTAACGTCTCATTTCTCTAATTCTGTCGCGGATGGGCCCCGCTTTCGTGTTGCCTACCAGGGTGTTCGTGGCGCATACAGTGAGTCGGCTGCTGAGAAGGCATACCCGAACTGCGAGGCGGTTCCCTGCGAACAGTTCGATACAGCTTTCGAAGCTGTTGAAAGTTGGCTTGTAGACAGAGCTGTTTTACCTATTGAAAACTCCTTAGGAGGAAGCATCCACAGGAACTATGACCTTTTACTCCGGCACAGCTTGCACATAGTGGGGGAAGTAAAACTTTCCGTTAGGCATTGCTTAATGGCCAATCACGGTGTTGAGATTGAGGACCTAAACCGAGTTCTTAGTCATCCTCAGGCTCTTGCTCAGTGTGAGAATACTCTAACAAGGTTGGGATTGGTCAGAGAAGCAGTGGATGATACCGCTGGTGCAGCAAAGCATGTTGCCTTACACAAGCTAAAAGATGCAGGAGCAGTTGCCAGCTCTACAGCTGCAGTTATTTATGGCTTGAAAATTCTTGCTCAAGATATTCAGGACGATTCTGACAATGTCACGCGATTCCTTATGCTTGCTAGAGAACCCCTAATTCCTGGCACTGATAGGCCATTCAAGACAAGCATAGTTTTTTCACTTGAGGAAGGTCCTGGAGTGCTTTTCAAGGCGCTTGCTGTTTTTGCACTACGTCGTATCAATCTAACAAAAATTGAAAGTCGTCCCTTGCGAAAGCAACCCCTGCGTTCATCTGATGAGAACAATGGCCATTTAAAATACTTTGACTATCTTTTCTATGTTGATTTTGAAGCATCAATGGCTGACCAGAATGCACAGAATGCTCTTCAGCATCTGAAGGAGTTTGCCACATTTTTGAGAGTGCTTGGAAGTTATCCAGTTGACAATAGTATGTTAAACGCTGATAAAAGTCCATTCCAACGAACATTTGTGAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAACTACGGGTTTTTAAAGATCAAATCTCTAAAGCTGGTCTAACATCTTCTCTCCGCCCAGTTCTGCAACAAGATATCGAGCTAGAGGATTTAGAGGTACAACTAGCAGAGCATGAACATGAGATGATAGAAATGAATTTGAACGGTGAAAGGCTTCAACAATCATATAACGAACTTCTTGAGTTCAAGATGGTATTGCAAAAGGCAGTTGGCTTTCTTGTATCAACGAATCATGCAGTTGAGGAGAGGGAATTAGATGAAAATGTTCATTTGAATGATTTGTATTCTGAAACAGCATCATTACTTGAACGGGAGATAAGACCAGGACCATCAAACCAATCTGGCTTAAGATTTATCAGCGGGATCATTTGTAAATCTAAAATTCTGAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGAGGAAATATGCTTTTTAATCAGGCATTAGCTGATGATCAGATCGTGGATCCAGTGTCCTTGGAAATGATATGCTTTTTGGTAGTTGAGAAATCAGTATTTGTAGTATTTTTCTCTGGAGAGCAGGCCAGAACAAAGATTATGAAAATCTGTGAGGCTTTTGGAGCAAATTGTTATCCTGTGCCTGAGGATATAACCAAGCAGAGGCAAATAAGTAGAGAAGTTTCATCACGTCTAACTGATCTGGAAGCCACTTTGGACGCTGGGATCAACCACCGAAATAAAGCCCTTACATCTATAGGATTTCACTTAACAAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACATTGAATATGTTAAACTTTGATGTTACCAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATATCTGCTAAAACTCAGATTAAGGAGGCATTGCAACGGGCAACATTTGATAGTAGTTCACAAGTGGGCATAATTTTTCACGAGATGGATAGTACAGAATCACCTCCTACTTATTTCAAAACAAACAGTTTCACGGGTGCTTATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCTAATCCTGCAGTTTACACTGTTATTACATTTCCTTTTCTCTTTGCGGTGATGTTTGGAGACTGGGGTCATGGAATATGCTTGTTACTAGGAGCTTTATTTCTTCTAGCTCGTGAAAGTAAGTACAGCTCTCAGAAACTTGGAAGCTTTATGGAGATGTTATTTGGTGGGCGCTATGTACTACTTTTGATGTCACTGTTTTCAATATATTGTGGGTTGATTTACAATGAATTCTTCTCTATCCCATTTCATATATTTGGTGGGTCTGCATATAAGTGTCGGGATGCTACGTGCAGTGATGCACACACCGTGGGCTTAGTCAAATACCGAGATCCATATCCACTTGGTGTGGACCCAAGTTGGCGAGGAAGTCGTACAGAACTTCCATTTTTGAACTCTCTTAAAATGAAGATGTCTATTTTGCTGGGTGTGGCCCAGATGAACTTAGGAATCATCTTGAGTTACTTCAATGCACATTTTTTTGACAGTTCACTCGACATAAGGTATCAGTTTGTGCCACAGATGATTTTCCTTAACAGCCTTTTTGGGTATCTTTCTCTCCTCATTGTCATCAAGTGGTGCACTGGTTCTCAGGCAGACCTCTATCATATTATATTGTTGCTTTTGGCTTTGGTTGCAGTACCATGGATGCTCTTTCCGAAACCTTTTATTCTCAAAAGGCTTTATTCGGAGAGATTTCAAGGTCGGACTTATGGAATGCTTGGAACCTCAGAGATGGATCTTGAAGTGCAGCCTGATTCAGCGAGGCATAACCGTGAAGAGTTTAATTTTAGTGAAGTCTTTGTTCATCAAATGATACACTCCATAGAGTTTGTCTTAGGTGCTGTTTCAAACACAGCATCTTATCTTCGACTTTGGGCTCTAAGCTTGGCTCACTCAGAGTTGTCTACTGTCTTCTATGAGAAAGTCCTTCTCCTTGCTTGGGGGTATGACAATATTGTCATTCGATTGGTTGGGTTAGCAGTTTTTGCCTTTGCCACGGCTTTCATACTCCTCATGATGGAGACCCTCAGTGCTTTTCTTCATGCCCTGCGTCTTCATTGGGTGGAATTTCAGAACAAGTTCTACCACGGCGATGGCTATAAGTTCAGGCCATTCTCATTTGCCTCCTTGGTCGAGGAAGATGATTAG 3405 42.23 MAASLSGTSMTLSFRCSFIGSSLADDKAILIGKVCLPGWKWRRRAPPFLAVRGNGRSSDLTIETPSLSEGFSGGDICKDLSTLPRPLTSHFSNSVADGPRFRVAYQGVRGAYSESAAEKAYPNCEAVPCEQFDTAFEAVESWLVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVKLSVRHCLMANHGVEIEDLNRVLSHPQALAQCENTLTRLGLVREAVDDTAGAAKHVALHKLKDAGAVASSTAAVIYGLKILAQDIQDDSDNVTRFLMLAREPLIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRRINLTKIESRPLRKQPLRSSDENNGHLKYFDYLFYVDFEASMADQNAQNALQHLKEFATFLRVLGSYPVDNSMLNADKSPFQRTFVNQVKRCAEMSRKLRVFKDQISKAGLTSSLRPVLQQDIELEDLEVQLAEHEHEMIEMNLNGERLQQSYNELLEFKMVLQKAVGFLVSTNHAVEERELDENVHLNDLYSETASLLEREIRPGPSNQSGLRFISGIICKSKILRFERMLFRATRGNMLFNQALADDQIVDPVSLEMICFLVVEKSVFVVFFSGEQARTKIMKICEAFGANCYPVPEDITKQRQISREVSSRLTDLEATLDAGINHRNKALTSIGFHLTKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPISAKTQIKEALQRATFDSSSQVGIIFHEMDSTESPPTYFKTNSFTGAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLLARESKYSSQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSIPFHIFGGSAYKCRDATCSDAHTVGLVKYRDPYPLGVDPSWRGSRTELPFLNSLKMKMSILLGVAQMNLGIILSYFNAHFFDSSLDIRYQFVPQMIFLNSLFGYLSLLIVIKWCTGSQADLYHIILLLLALVAVPWMLFPKPFILKRLYSERFQGRTYGMLGTSEMDLEVQPDSARHNREEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNIVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLVEEDD 1134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 33157054 33169579 - BLOR20152 Blo13g01100 69495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01100 1134 CDD PBP2_Ct-PDT_like 102 279 - -
Blo13g01100 1134 CDD ACT_CM-PDT 289 381 - -
Blo13g01100 1134 Gene3D - 284 385 - -
Blo13g01100 1134 Pfam V-type ATPase 116kDa subunit family 387 949 IPR002490 GO:0033179|GO:0046961|GO:1902600
Blo13g01100 1134 Pfam V-type ATPase 116kDa subunit family 954 1126 IPR002490 GO:0033179|GO:0046961|GO:1902600
Blo13g01100 1134 SUPERFAMILY Periplasmic binding protein-like II 102 283 - -
Blo13g01100 1134 PANTHER VACUOLAR PROTON ATPASE A1 955 1134 - -
Blo13g01100 1134 ProSitePatterns Prephenate dehydratase signature 2. 317 324 IPR018528 GO:0004664|GO:0009094
Blo13g01100 1134 Gene3D - 98 185 - -
Blo13g01100 1134 ProSiteProfiles ACT domain profile. 291 381 IPR002912 -
Blo13g01100 1134 PANTHER VACUOLAR PROTON ATPASE A1 387 957 - -
Blo13g01100 1134 ProSiteProfiles Prephenate dehydratase domain profile. 102 277 IPR001086 GO:0004664|GO:0009094
Blo13g01100 1134 Coils Coil 431 465 - -
Blo13g01100 1134 ProSitePatterns Prephenate dehydratase signature 1. 253 275 IPR018528 GO:0004664|GO:0009094
Blo13g01100 1134 Gene3D - 186 265 - -
Blo13g01100 1134 Pfam Prephenate dehydratase 103 279 IPR001086 GO:0004664|GO:0009094
Blo13g01100 1134 SUPERFAMILY ACT-like 272 382 IPR045865 -
Blo13g01100 1134 PANTHER VACUOLAR PROTON ATPASES 387 957 IPR002490 GO:0033179|GO:0046961|GO:1902600
Blo13g01100 1134 PANTHER VACUOLAR PROTON ATPASES 955 1134 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01100 Blo14g00151 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01063 Blo-Chr3:37002431 Blo13g01100 Blo-Chr13:33157054 1.27E-137 dispersed
Blo03g01311 Blo-Chr3:39455328 Blo13g01100 Blo-Chr13:33157054 1.28E-136 dispersed
Blo04g00529 Blo-Chr4:4553860 Blo13g01100 Blo-Chr13:33157054 1.96E-143 dispersed
Blo08g00034 Blo-Chr8:302817 Blo13g01100 Blo-Chr13:33157054 3.55E-121 dispersed
Blo13g01100 Blo-Chr13:33157054 Blo17g00765 Blo-Chr17:24366795 0 dispersed
Blo13g01100 Blo-Chr13:33157054 Blo14g00151 Blo-Chr14:1160187 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01100 K02154 - zju:107411281 1290.02