Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01112 ATGGAAATTGATCTGAACCATGCAGTGATTGAGATGGAGAATAATGCATTTTGCAATGGCACTTGCGAAAGAGGGGGCTGTGTTTGTTGTTCGTCCTCTTCAACTTCTTCTTGTTCTTCAAATTCATCTTCTCCAACTGCTTCTTCCTCTACTTATTTGGAGCTTTGGTATGCTTGTGCTGGCCCTCATACTTCGCTGCCCAGAAAAGGGAATGTGGTTGTCTATTTTCCGCAAGGTCACCTTGAACAGGCTGCCTCAAACTCTCCTTTCTCGCCCATGGAGTTGCCTTCTTTTAATCTCCCTCCACAGATCTTCTGCAGAGTTGTAAACAACCAGCTCCTTGCAAACAAAGATAATGATGAGGTCTACACGCAAGTTACTTTGCTCCCCCAACCAGAGTTGGTTGCTGAGACTTTAGCTGGAAAAGAGCTTGAAGATCTGGGCATGGGAGATGGGGGTGGAGGACCACCCATAAGAACTACCCCTCATATGTTCTGTAAGACTCTTACGGCTTCTGATACCAGCACTCATGGAGGTTTCTCTGTTCCTCGTCGTGCTGCCGAAGACTGTTTCCCTCCTCTGGATTACAAACAGCAGAGACCCTCTCAAGAACTTGTTACGAAAGATCTGCATGGAGCGGAGTGGAAGTTTCGACATATTTACAGAGGCAAGTCTTCTGCGAATTTTCAGCTACAATATGGTCAACCGAGGCGGCACTTGCTCACTACAGGTTGGAGTGCTTTTGTGAGCCAAAAGAATCTTGTTTCTGGAGATGCAGTGCTCTTCTTAAGAGGGGAAAATGGAGAGCTAAGGTTGGGAATCAGAAGAGCTGTCCGGCCTCGTAGTGGTCTTCCCGACGCTATTTTTGGCAATCAAAATGCCTATCCCAATGTCATTTCTTCATTGGCTAAAGCGATATCCACCAAGAGCGTGTTTCATGTATTCTACAGTCCAAGGGCGAGTCATGCGCAATTTGTCATACCTTACCAGAAATACGTGAAAAGCCTGATTAATCCAGTGACTGTTGGAACAAGATTTAAAATGAAATTTGAAATGGATGATTCCCCTGAACGAAGGTGTAGTGGCGTCGTAAGTAATATTGCTGATGTCGATCCTTTTCGATGGCCAAACTCGAAATGGAGATGCTTGACGGTCAGATGGGATGAAGATATCACGAGTGGTCATCACGAGCGTGTTTCGCCCTGGGAGATCGATACCTCCGTTTCTCTCCCGCCTTTGAGCGTTCAGACTTATCCAAGGATGAAGAAACTGCGGACAAGTCTGCCTGCCATCCCCCCCACCAACCCCATAACTGGAGGTGGTATTTTGGACTTTGAGGATTCTTTTAGATCCTCTAAGGTCTTGCAAGGTCAAGAAAATGTGAGTTTTACATCACCGCCCTTCAATCGATGTAATGCTGCAAATCGCTCACTCGAGTTTGAGAGGCAATCCCAAGTGATTCGAACAAAAAATCTCAGTGAAATGGGAAATGGTAATATTGCCGACTTTGTCAAGGCTCATTCTATTCCTTACATGGGCCTTAAGGATAATTGCCGATATCCGAGGGTCTTGCAAGGTCAAGAAATATTTCCATCGAAGATGCTAACAAAGAAAGCGGAATTCATGGGTCAGCTCAACATTAGTAACAATTCTTCGAACATGTTTCAATCGCACAAGCTTTTATCGGAAGGCACTCAAAACATGTATATTCCTTATCGTGAAATTTACAAGCGCAGCCAAGAATTCGCTAGGCTTTCTTATATTAACAATTTCTCTCGAGAAGTCTCGTTTAACTCTTCTGTGGAGGCTGCGGGTATCCAAAATGATGCTCGAAGGATCGTTTTGCCGAATTTGCATGAGCAAATGGAAGTTCTAAGAAATTCAAATGATGAAAATTCTAATGGGATTACAACTGGTTGCAGACTTTTCGGGGTTTCCTTGACTGGGGAAACCGCTACGAATTCGCAGAGTTCTGGGAAGAGAAGTTGCACGAAGGTTCACAAGCAAGGCAGCTTGGTGGGAAGAGCCATCGATCTCGCTAAACTGAATGGCTATGCTGACCTGCTTGCTGAACTTGAGCGCTTGTTTGGAATGGAAGGCCTCTTAAGAGATCCCGACAAAGGGTGGAGGATATTATACACTGACAACGAAAACGATGTGATGGTTGTCGGAGACGATCCATGGCATGAGTTCTGCAATGAAGTGACCAAGATCCATATCTACACTCACGAAGAAGTGGAGAAGATGAATGTGGGAATGCTGAGTGATGATACTCAAAGCTCCTTAGAACAGGCTCCACCCAATACGGAACCATCCAAATCCTCGTCGGTTGGACAGCCGGATTCGTCCCCAATGGCCGAGACGGCAGAATTGAGATGTAGGCACCGCAGGTTGTCTGATTTCTTCGGTCGGATATTACATTCTCGAGTCGAGGGACACTATCGAGTGGACGTAATAAACCACTCTCCTATTCCGACTTCCCCAGAGCCTCCGGTAGCACAGCTGAGACAGCGATGGGTTCTTTGCCCCTGCGGGGATAGAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGA 2628 46.0 MEIDLNHAVIEMENNAFCNGTCERGGCVCCSSSSTSSCSSNSSSPTASSSTYLELWYACAGPHTSLPRKGNVVVYFPQGHLEQAASNSPFSPMELPSFNLPPQIFCRVVNNQLLANKDNDEVYTQVTLLPQPELVAETLAGKELEDLGMGDGGGGPPIRTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVTKDLHGAEWKFRHIYRGKSSANFQLQYGQPRRHLLTTGWSAFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRSGLPDAIFGNQNAYPNVISSLAKAISTKSVFHVFYSPRASHAQFVIPYQKYVKSLINPVTVGTRFKMKFEMDDSPERRCSGVVSNIADVDPFRWPNSKWRCLTVRWDEDITSGHHERVSPWEIDTSVSLPPLSVQTYPRMKKLRTSLPAIPPTNPITGGGILDFEDSFRSSKVLQGQENVSFTSPPFNRCNAANRSLEFERQSQVIRTKNLSEMGNGNIADFVKAHSIPYMGLKDNCRYPRVLQGQEIFPSKMLTKKAEFMGQLNISNNSSNMFQSHKLLSEGTQNMYIPYREIYKRSQEFARLSYINNFSREVSFNSSVEAAGIQNDARRIVLPNLHEQMEVLRNSNDENSNGITTGCRLFGVSLTGETATNSQSSGKRSCTKVHKQGSLVGRAIDLAKLNGYADLLAELERLFGMEGLLRDPDKGWRILYTDNENDVMVVGDDPWHEFCNEVTKIHIYTHEEVEKMNVGMLSDDTQSSLEQAPPNTEPSKSSSVGQPDSSPMAETAELRCRHRRLSDFFGRILHSRVEGHYRVDVINHSPIPTSPEPPVAQLRQRWVLCPCGDRATEVLRIQEKVTARRAVYHYDRCQVEVQ 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 33240094 33244729 - BLOR20164 Blo13g01112 69507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01112 875 Gene3D - 657 750 - -
Blo13g01112 875 Gene3D - 163 278 IPR015300 -
Blo13g01112 875 SUPERFAMILY CAD & PB1 domains 662 740 - -
Blo13g01112 875 SUPERFAMILY DNA-binding pseudobarrel domain 161 283 IPR015300 -
Blo13g01112 875 SMART B3_2 165 278 IPR003340 GO:0003677
Blo13g01112 875 Gene3D - 340 411 - -
Blo13g01112 875 PANTHER AUXIN RESPONSE FACTOR 22 777 - -
Blo13g01112 875 MobiDBLite consensus disorder prediction 757 789 - -
Blo13g01112 875 Pfam Auxin response factor 303 383 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo13g01112 875 CDD B3_DNA 163 276 IPR003340 GO:0003677
Blo13g01112 875 Pfam B3 DNA binding domain 165 277 IPR003340 GO:0003677
Blo13g01112 875 MobiDBLite consensus disorder prediction 757 783 - -
Blo13g01112 875 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 22 777 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo13g01112 875 ProSiteProfiles B3 DNA-binding domain profile. 165 278 IPR003340 GO:0003677
Blo13g01112 875 ProSiteProfiles PB1 domain profile. 661 743 IPR000270 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01112 Blo14g00164 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00221 Blo-Chr8:2600430 Blo13g01112 Blo-Chr13:33240094 1.30E-136 dispersed
Blo13g01112 Blo-Chr13:33240094 Blo14g00413 Blo-Chr14:4588879 3.73E-142 dispersed
Blo13g01112 Blo-Chr13:33240094 Blo14g00164 Blo-Chr14:1242802 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13215 PF02362 B3 1.00E-18 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01112 - - qsu:112032972 1052.74