Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo13g01118 ATGGCAAAAGACGTGGAAGTTGCAGAGCAGGGAGATTACGCCCGGAAGGACTACCAGGACCCTCCTCCGGCGAAGTTGATAGATATGGAGGAGCTTACTCTCTGGTCATTTTACAGAGCTCTGATTGCAGAGTTCATCGCAACGCTTCTGTTCCTCTACATCACGATATTGACTGTGATTGGATATAACCACTCCACTGACGGGGGTGTTAACCCTTGCGATGGAGTTGGTATTCTGGGTATCGCCTGGGCCTTTGGAGGAATGATCTTCGTTCTCGTCTACTGCACCGCCGGTATCTCTGGAGGGCACATAAACCCGGCGGTGACATTAGGGCTGTTCTTGGCGAGGAAGGTTTCACTGGTGAGGGCGATTATGTATATGGTAGCGCAGTGTTTGGGCGCTATCTGTGGATGCGGACTGGTGAAGGCCTTCCAAAAGTCATACTACTCTACGTACGGAGGTGGGGCAAACAAGCTAAACGATGGCTACAACGTCGGCACCGGATTAGGCGCAGAGATCATCGGCACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACTGATCCTAAACGAAGTGCTCGAGACTCCCATGTTCCGGTTTTGGCTCCTTTGCCCATTGGGTTTGCTGTTTTCATGGTTCACTTGGCCACCATTCCGGTGACGGGAACTGGTATCAACCCTGCTAGAAGTTTAGGAGCTGCGGTCATCTACAACAAGCAGAAGCCCTGGGATGATCAATGGATTTTCTGGGTTGGGCCTTTCATCGGAGCTGCGATTGCTGCTTTCTACCACCAGTTTATTCTCAGAGCGGCAGCCATTAAAGCTCTCGGATCTTTCAGGAGCAACGCTTAA 852 51.64 MAKDVEVAEQGDYARKDYQDPPPAKLIDMEELTLWSFYRALIAEFIATLLFLYITILTVIGYNHSTDGGVNPCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKVSLVRAIMYMVAQCLGAICGCGLVKAFQKSYYSTYGGGANKLNDGYNVGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKQKPWDDQWIFWVGPFIGAAIAAFYHQFILRAAAIKALGSFRSNA 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 33303294 33304387 - BLOR20170 Blo13g01118 69513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo13g01118 283 CDD MIP 39 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 TIGRFAM MIP: MIP family channel proteins 43 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Blo13g01118 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 283 IPR034294 -
Blo13g01118 283 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 PANTHER AQUAPORIN PIP2-4-RELATED 1 283 - -
Blo13g01118 283 Pfam Major intrinsic protein 32 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo13g01118 283 Gene3D Glycerol uptake facilitator protein. 24 283 IPR023271 -
Blo13g01118 283 SUPERFAMILY Aquaporin-like 29 269 IPR023271 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01118 Blo14g00180 BCT
Blo13g01118 Blo14g00177 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00468 Blo-Chr12:22213838 Blo13g01118 Blo-Chr13:33303294 1.11E-106 dispersed
Blo15g00657 Blo-Chr15:18671074 Blo13g01118 Blo-Chr13:33303294 3.20E-25 transposed
Blo01g01165 Blo-Chr1:42789605 Blo13g01118 Blo-Chr13:33303294 1.16E-144 wgd
Blo12g00467 Blo-Chr12:22213450 Blo13g01118 Blo-Chr13:33303294 9.30E-48 wgd
Blo13g00923 Blo-Chr13:31718196 Blo13g01118 Blo-Chr13:33303294 1.12E-172 wgd
Blo13g01118 Blo-Chr13:33303294 Blo14g00177 Blo-Chr14:1386783 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo13g01118 K09872 - pvy:116105008 509.22