Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00015 ATGATAGCAGACAGCAGCCGTATGGCCAAATTTATGGCAAATCTGACATTTGGGTTTATGAGAATTGGATTTCCCAGGGCACCATTGCAGAGGAGGCGAAGCAAGTTTCCCGAGAATGCCAGAGAACTGAGGAGCCGAACCAATGTAGTAGCCGTTGTCGCAGAAGAGCAGAGGATAAAGAGCGTGGCAGCTGTTGCAGATCTGAAGCCCCCTCCTGCAGAAAGTTTACATGGGAAAAATGGATGTGTTAAGATAATAAAGTCTCCCATGGCTGCCACTTCCTACACTGTTGCTTCACTCCAAAGAGCAACAAATAGCTTTAGTCAAGAACATCTGATGGGAGAAGGTTCCCTCGGTCGTGTTTACAGAGCGGACTTCCCAAATGGAAAGACGATGGCGATTAAAAAGGTGGACAGTGCTGCTCTGTCGTTACAGGAGGAAGATAGTTTTCTTCAACTTGTCTCCAATATGTCTAGATTGAGGCAGCCTAACATTGTCGCCCTCGTCGGATATTGTGCAGAGCAGGGACAGCGTCTTCTAGTGTATGAATATATTGGAAATGGTAGTCTTCATGAAAGGCTGCATTACACTGAAGATGGCCGTAGCACCCTCGGTTGGAATTCACGGGTTAGAGTCGCCCTCGGCGCCGCACGAGCTCTAGAGTACTTGCACGAGGTGTGTTTGCCGAGTGTGGTGCACAGAAATTTCAAGTCAGCAAACATATTACTTGATGCAGAGATGAATCCCCACTTGTCGGATTGCGGCTTGGCTGCTCTAACACCCAACACAGAGCGGCAAATAACGACCCAGCTGGTCGGATCGTTTGGTTACAGTGCTCCGGAATTCGCATTGTCCGGATTATACACCGTCAAAAGCGATGTGTACAGCTTTGGGGTGGTGATGCTAGAGCTACTCACCGGTCGTAAACCTCTTGATGGAACGAGATTGGAGCCGTCACTTGTGAGATGGGCGACTCCTCAACTTCACGACATAGATGCCTTGGCAAAAATGGTAGATCCTGCTCTGGATGGGATGTACCCTGCAAAGTCCCTCTCTCGTTTTGCAGCCATTATTGCCCTCTGTACCAAGCCCCAGCCACAACTCCGCCCTCCCATGTCTGAAATCGTCCAGGCGTTGGCCCGGCTAGCTCAAAGGCGCCCTAGCGATGAATCCAGTTTCACGTGGAAAACCACAGATCATGTGGCGACAGATGCATCATTCTGCTCGAAAACCATGAAGCTCTCTGTCTAG 1251 49.64 MIADSSRMAKFMANLTFGFMRIGFPRAPLQRRRSKFPENARELRSRTNVVAVVAEEQRIKSVAAVADLKPPPAESLHGKNGCVKIIKSPMAATSYTVASLQRATNSFSQEHLMGEGSLGRVYRADFPNGKTMAIKKVDSAALSLQEEDSFLQLVSNMSRLRQPNIVALVGYCAEQGQRLLVYEYIGNGSLHERLHYTEDGRSTLGWNSRVRVALGAARALEYLHEVCLPSVVHRNFKSANILLDAEMNPHLSDCGLAALTPNTERQITTQLVGSFGYSAPEFALSGLYTVKSDVYSFGVVMLELLTGRKPLDGTRLEPSLVRWATPQLHDIDALAKMVDPALDGMYPAKSLSRFAAIIALCTKPQPQLRPPMSEIVQALARLAQRRPSDESSFTWKTTDHVATDASFCSKTMKLSV 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 108837 111494 + BLOR14333 Blo14g00015 69528

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00015 416 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 67 401 - -
Blo14g00015 416 SUPERFAMILY Protein kinase-like (PK-like) 86 379 IPR011009 -
Blo14g00015 416 ProSiteProfiles Protein kinase domain profile. 107 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo14g00015 416 PANTHER OS01G0253100 PROTEIN 67 401 IPR045271 GO:0004714|GO:0006468
Blo14g00015 416 Pfam Protein tyrosine and serine/threonine kinase 110 379 IPR001245 GO:0004672|GO:0006468
Blo14g00015 416 Gene3D Transferase(Phosphotransferase) domain 1 185 404 - -
Blo14g00015 416 Gene3D Phosphorylase Kinase; domain 1 74 184 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00015 - - - mnt:21397310 569.311
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00015 Blo-Chr14:108837 Blo10g00947 Blo-Chr10:28553228 1.16E-120 dispersed
Blo13g00991 Blo-Chr13:32330973 Blo14g00015 Blo-Chr14:108837 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo15g00549 . 31 753 Strubbelig Receptor Gene Family AT4G03390 62.9 6.2e-211 731.1
Blo02g00087 . 39 765 Strubbelig Receptor Gene Family AT4G03390 56.8 2.0e-180 629.8
Blo07g00813 . 365 657 Strubbelig Receptor Gene Family AT4G03390 57.7 3.1e-93 340.1
Blo14g00015 . 95 385 Strubbelig Receptor Gene Family AT4G03390 58.5 1.5e-92 337.8
Blo09g00427 . 113 787 Strubbelig Receptor Gene Family AT5G06820 51.2 1.4e-164 577.0
Blo10g00929 . 21 677 Strubbelig Receptor Gene Family AT1G78980 59.5 8.1e-186 647.5
Blo05g00016 CCT 251 556 Strubbelig Receptor Gene Family AT1G78980 60.9 9.5e-102 368.2
Blo14g00015 . 92 399 Strubbelig Receptor Gene Family AT1G78980 54.3 2.0e-91 334.0
Blo15g00549 . 27 627 Strubbelig Receptor Gene Family AT2G20850 51.0 9.1e-131 464.5
Blo14g00015 . 91 259 Strubbelig Receptor Gene Family AT2G20850 56.8 2.5e-51 200.7
Blo10g00929 . 20 660 Strubbelig Receptor Gene Family AT3G13065 50.3 7.3e-139 491.5
Blo05g00016 CCT 248 539 Strubbelig Receptor Gene Family AT3G13065 59.7 1.4e-97 354.4
Blo14g00015 . 94 382 Strubbelig Receptor Gene Family AT3G13065 51.5 4.8e-82 302.8
Blo13g00991 . 361 654 Strubbelig Receptor Gene Family AT1G11130 53.1 3.0e-84 310.1
Blo10g00947 CCT 1604 1898 Strubbelig Receptor Gene Family AT1G11130 52.0 2.0e-83 307.4
Blo07g00813 . 369 651 Strubbelig Receptor Gene Family AT1G11130 51.6 7.0e-81 298.9
Blo14g00015 . 86 382 Strubbelig Receptor Gene Family AT1G11130 51.5 5.9e-80 295.8
Blo15g00549 . 27 627 Strubbelig Receptor Gene Family AT2G20850 51.0 9.1e-131 464.5
Blo14g00015 . 91 259 Strubbelig Receptor Gene Family AT2G20850 56.8 2.5e-51 200.7
Blo09g00427 . 113 787 Strubbelig Receptor Gene Family AT5G06820 51.2 1.4e-164 577.0
Blo15g00549 . 31 753 Strubbelig Receptor Gene Family AT4G03390 62.9 6.2e-211 731.1
Blo02g00087 . 39 765 Strubbelig Receptor Gene Family AT4G03390 56.8 2.0e-180 629.8
Blo07g00813 . 365 657 Strubbelig Receptor Gene Family AT4G03390 57.7 3.1e-93 340.1
Blo14g00015 . 95 385 Strubbelig Receptor Gene Family AT4G03390 58.5 1.5e-92 337.8
Blo10g00929 . 20 660 Strubbelig Receptor Gene Family AT3G13065 50.3 7.3e-139 491.5
Blo05g00016 CCT 248 539 Strubbelig Receptor Gene Family AT3G13065 59.7 1.4e-97 354.4
Blo14g00015 . 94 382 Strubbelig Receptor Gene Family AT3G13065 51.5 4.8e-82 302.8
Blo10g00929 . 21 677 Strubbelig Receptor Gene Family AT1G78980 59.5 8.1e-186 647.5
Blo05g00016 CCT 251 556 Strubbelig Receptor Gene Family AT1G78980 60.9 9.5e-102 368.2
Blo14g00015 . 92 399 Strubbelig Receptor Gene Family AT1G78980 54.3 2.0e-91 334.0
Blo10g00947 CCT 1224 1913 Strubbelig Receptor Gene Family AT1G53730 59.2 2.1e-192 669.5
Blo07g00813 . 1 666 Strubbelig Receptor Gene Family AT1G53730 59.8 1.3e-178 623.6
Blo05g00016 CCT 169 550 Strubbelig Receptor Gene Family AT1G53730 72.1 6.7e-151 531.6
Blo13g00991 . 50 677 Strubbelig Receptor Gene Family AT1G53730 50.3 2.6e-142 503.1
Blo14g00015 . 68 385 Strubbelig Receptor Gene Family AT1G53730 58.9 1.2e-102 371.3
Blo10g00947 CCT 1236 1918 Strubbelig Receptor Gene Family AT3G14350 59.2 1.7e-180 629.8
Blo05g00016 CCT 169 550 Strubbelig Receptor Gene Family AT3G14350 63.8 9.3e-126 448.0
Blo14g00015 . 89 385 Strubbelig Receptor Gene Family AT3G14350 56.9 1.5e-86 317.8
Blo13g00991 . 147 685 Strubbelig Receptor Gene Family AT4G22130 61.4 5.8e-174 607.8
Blo14g00015 . 55 407 Strubbelig Receptor Gene Family AT4G22130 72.1 5.4e-148 521.5
Blo10g00947 CCT 1610 1929 Strubbelig Receptor Gene Family AT4G22130 61.7 3.9e-114 409.1
Blo05g00016 CCT 245 565 Strubbelig Receptor Gene Family AT4G22130 62.3 6.7e-114 408.3
Blo07g00813 . 347 670 Strubbelig Receptor Gene Family AT4G22130 62.5 1.1e-113 407.5
Blo10g00929 . 346 675 Strubbelig Receptor Gene Family AT4G22130 54.4 3.1e-103 372.9
Blo15g00549 . 440 745 Strubbelig Receptor Gene Family AT4G22130 57.7 1.1e-97 354.4
Blo02g00087 . 472 765 Strubbelig Receptor Gene Family AT4G22130 54.9 2.0e-89 327.0
Blo11g00301 . 439 721 Strubbelig Receptor Gene Family AT4G22130 58.2 1.7e-88 323.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004508 2 2 2 1 0 0 2 0 0 1 1 0 2 1 0 2 0 0 2 0 1 0 0 0 0 1 1 1 0 0 22
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84651 PF07714 PK_Tyr_Ser-Thr 5.90E-41 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo14g00015 Blo_Chr14 FPKM 0.590547 1.136433 1.126998 1.2168 5.580521 6.986824 5.982757 0.891053 0.980951 0.629254