Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00106 ATGGCGATTCACAGACCGGAGCTAGGTTCTAACCTGAACTCCAATCAACCTGCAAAGCTTCGTTGGGGTGAGCTTGAGGAGGACGATGGAGAGGACCTCGACTTCTTTTTCCCTCCTAAGCAGGTAATCGGACCCGATGAGAATGGAATTAAGAAAGTTATCGAATACAAATTCAACGACGAGGGTAATAAGGTTAAGATCACCACCATAAGTCGCATTCGTAAGCTCGCAAATGCTAGGCTCAGCAAACAAGCCGTGGAGCGTAGATCCTGGCCTAAGTTCGGAGATGCGGTTCACGAAGAAGTTGGTAGCAGGCTAACTATGGTCTCCACTGAAGAGATCGTCCTCGAGCGACCGAGGGCTCCTGGTACCAAAACAGAGGAGCCAAAGGTTGCTGGTGATTCGTTAACCCAACTTAATAAAGGCGCTGTTCTCATGGTTTGTAGAACTTGTGGGAAGAAAGGTGACCATTGGACTTCAAGGTGCCCTTACAAGGATCTTGCCCCGCAGGCAGAGGGGTTCGTTGATAAGCCTGTTGCATCGGAGACTACTGCAGGTGCTTCAGGCCCTAGTAAAGGAGCGTATGTGCCCCCCAGCATGAGAGCAGGGGCCGAGAGAACAGGAACTGACATGAGACGCCGGAACGACGAGAACTCTGTTCGTGTTACCAACCTCTCGGAGGACACTCGAGAGCCTGACCTGCATGAGCTTTTCCGACCTTTTGGTGCCATAAGCCGTGTCTATGTGGCTATCGATCAGAAGACTGGAATGAGCAGAGGATTTGGTTTTGTCAACTTCGTCAACAGGGAAGAAGCTCAGAGAGCCATCAACAAACTCAATGGGTATGGCTACGACAATCTCATCCTCAGAGTGGAATGGGCCACTCCTAGAGCAAATTAG 900 50.44 MAIHRPELGSNLNSNQPAKLRWGELEEDDGEDLDFFFPPKQVIGPDENGIKKVIEYKFNDEGNKVKITTISRIRKLANARLSKQAVERRSWPKFGDAVHEEVGSRLTMVSTEEIVLERPRAPGTKTEEPKVAGDSLTQLNKGAVLMVCRTCGKKGDHWTSRCPYKDLAPQAEGFVDKPVASETTAGASGPSKGAYVPPSMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLHELFRPFGAISRVYVAIDQKTGMSRGFGFVNFVNREEAQRAINKLNGYGYDNLILRVEWATPRAN 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 742813 744770 + BLOR14424 Blo14g00106 69619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00106 299 PIRSF Transl_init_eIF-3_RNA-bind 12 299 IPR017334 GO:0003743|GO:0005737|GO:0005852
Blo14g00106 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 218 296 IPR000504 GO:0003723
Blo14g00106 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 17 299 - -
Blo14g00106 299 CDD eIF3G 48 166 IPR024675 -
Blo14g00106 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 220 286 IPR000504 GO:0003723
Blo14g00106 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 17 299 - -
Blo14g00106 299 SMART rrm1_1 219 292 IPR000504 GO:0003723
Blo14g00106 299 Gene3D - 180 299 IPR012677 -
Blo14g00106 299 SUPERFAMILY RNA-binding domain, RBD 216 298 IPR035979 GO:0003676
Blo14g00106 299 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 19 298 IPR017334 GO:0003743|GO:0005737|GO:0005852
Blo14g00106 299 MobiDBLite consensus disorder prediction 181 205 - -
Blo14g00106 299 Pfam Eukaryotic translation initiation factor 3 subunit G 41 167 IPR024675 -
Blo14g00106 299 CDD RRM_eIF3G_like 219 294 IPR034240 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01062 Blo14g00106 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00991 Blo-Chr3:36080455 Blo14g00106 Blo-Chr14:742813 1.65E-10 dispersed
Blo03g01372 Blo-Chr3:40163872 Blo14g00106 Blo-Chr14:742813 9.20E-10 dispersed
Blo14g00106 Blo-Chr14:742813 Blo16g01075 Blo-Chr16:39300518 1.86E-11 dispersed
Blo13g01062 Blo-Chr13:32859169 Blo14g00106 Blo-Chr14:742813 1.36E-37 transposed
Blo13g01061 Blo-Chr13:32856595 Blo14g00106 Blo-Chr14:742813 3.57E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00106 K03248 - jre:109017816 504.982