Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00121 ATGGAAGGAGACAAAGGCGCTCTCTTGCAGAGTCTTATCAATTTGGTCAACGAAATAGCTTCTTTCTCCGATTACGCGTATTCCGTGAAGAAACAGTTTTGCAATTTAGTGAGGAGGTTGAAGCTCTTGATTCCGATGTTCGAGGAGATTAGAGACGGAAAAGTGGCGCCCCCTGAAGAGACGGTGAAAGCTCTCCTCGCGTTGAAGGAAGCTATGGAGTCAGCTAAGGAGTTACTCAGATTTGGAAGCGAGGGGAGCAAGATTTATCTGCTGAATACTTTCCCTGATTTTCTTCTCCTTTTTCTGGTTCTAGAGAGAGATGAAATTATGAACAAGTTCACCGAAGTGACCAGACGGTTGGAGCGAGCTTTGAGTGAAACTTGCTACGAGAAACTCGACATTTCAGATGAAATTAAGGAACAGGTTGAGCTTGTTCTTGGTCAGTTTGGACGAGCAGTAGCTCGGGTTGATCCACCCGATACTGAGCTTTATCACGATATACTAGACCTTTACAATAAAAACAATTATTTGACTACAGATCGAGATATCGTTAGACGGCTGGCCGAAAAACTGCAATTATTGGGAATAGCAGATCTTACTCGAGAGTCATTAGCTCTGCACGAGCTGGTGGCTGCTAGCAGTGGAGATCCAGGGGAGAGATTTGAGAAGATGTCAATGCTACTGAAGAAAATAAAGGATTTTGTTCAAACTGAAAATCTTGTTACTTTCTCGAATGAGAAGAATCTAGGCCCTAGTTGTAGTGGACAAGTATCTCCCATCAGTAATCAAAAACTTCCTGTTGTGCCAGATGACTTTCGCTGTCCGATATCCCTCGAGTTGATGAAAGATCCTGTCATTGTGTCTACTGGTCAGACCTATGATCGTTCCTGCATTGAGCAGTGGTTGGATGCAGGGCATGGGACGTGCCCAAAGACGCAACAGGTCCTTACGAGAACCATTCTTACCCCGAATTATGTGTTGCGAAGTCTCATTGAGCAATGGTGCGAAACGCATGGCATTGACCCGCCAAAACGGCCGACCAAAACTGCTTCGTCTCTTCCTGAGGGCAGTAACATTGAAATTCTCATCTCTAAACTATCGATCGGAAACCTTGACGAACAGAGATCAGCAGCTTGTGAGATCCGACTTCTTGCCAAGCGCAATGCTGATAATCGTGTGGCCATTGCTGAAGCGGGTGCAATTCCTCCTCTGGTCAGCCTCCTTTTGGATTCTGATTCCCGTACTCAGGAACATGCTGTGACGGCCCTACTTAACTTGTCGATATGCGAAGATAACAAGAGACGCATCATGGCTTGTTCGGCGATTCCGGGTATTGTTCATGTTTTGAAGAGAGGAAGTATGGAGGCTCGAGAAAATGCAGCAGCCACTCTTTTCAGCCTTTCAGTTCGAGATCAAAACAAGATAATAATTGGTTCCTTAGGGGCCATCCCTCCACTTGCCACACTTTTGAGCGAAGGTACACAGAGGGGAAAGAAAGATGCAGCCACCGCTCTTTTCAATCTGTGCATTTACCAGGGGAACAAGGGTAAGGCAGTGAGAGCCAGAGTTATTCCGACTCTTATGCGGCTTCTGACGGAACCCGGAGGAGGAATGTTGGATGAGGCTCTGGCTGTTTTGGCAATACTGGCCAGTCATCCTGAAGGGAAAGCTGCCATTGGAGCTGCAAGGGCAGTGCCGGTTTTGGTAGAGGTTATTGGAAATGGATCCTCGAGGAACAGAGAGAATGCGGCTGCTGTTTTGGTGCATCTTATTGCCGGAGATCAGTGTCATTTGGTGGAAGCGAAAGAGCTTGGAGTGATGGAGTCGCTAATAGATTTGGCACAAAATGGAACTGATAGAGGCAAGCGAAAAGCCGCTCAATTGCTCGAGCGTATGACTCAATTTGTCGAGGATCAGACACAAGCCAAGGCTCAGGGAGAGGCTCAATCCCATACCCAAACACCCCCTCCTCCGCTCACTGCTGATAGTTGA 1992 46.99 MEGDKGALLQSLINLVNEIASFSDYAYSVKKQFCNLVRRLKLLIPMFEEIRDGKVAPPEETVKALLALKEAMESAKELLRFGSEGSKIYLLNTFPDFLLLFLVLERDEIMNKFTEVTRRLERALSETCYEKLDISDEIKEQVELVLGQFGRAVARVDPPDTELYHDILDLYNKNNYLTTDRDIVRRLAEKLQLLGIADLTRESLALHELVAASSGDPGERFEKMSMLLKKIKDFVQTENLVTFSNEKNLGPSCSGQVSPISNQKLPVVPDDFRCPISLELMKDPVIVSTGQTYDRSCIEQWLDAGHGTCPKTQQVLTRTILTPNYVLRSLIEQWCETHGIDPPKRPTKTASSLPEGSNIEILISKLSIGNLDEQRSAACEIRLLAKRNADNRVAIAEAGAIPPLVSLLLDSDSRTQEHAVTALLNLSICEDNKRRIMACSAIPGIVHVLKRGSMEARENAAATLFSLSVRDQNKIIIGSLGAIPPLATLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRARVIPTLMRLLTEPGGGMLDEALAVLAILASHPEGKAAIGAARAVPVLVEVIGNGSSRNRENAAAVLVHLIAGDQCHLVEAKELGVMESLIDLAQNGTDRGKRKAAQLLERMTQFVEDQTQAKAQGEAQSHTQTPPPPLTADS 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 881191 883767 + BLOR14439 Blo14g00121 69634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00121 663 Pfam Armadillo/beta-catenin-like repeat 388 427 IPR000225 GO:0005515
Blo14g00121 663 Pfam Armadillo/beta-catenin-like repeat 471 509 IPR000225 GO:0005515
Blo14g00121 663 Gene3D - 353 535 IPR011989 -
Blo14g00121 663 Gene3D - 536 653 IPR011989 -
Blo14g00121 663 PANTHER U BOX DOMAIN-CONTAINING 7 646 - -
Blo14g00121 663 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 341 IPR013083 -
Blo14g00121 663 Gene3D - 7 128 IPR036537 GO:0007166
Blo14g00121 663 SMART Ubox_2 271 334 IPR003613 GO:0004842|GO:0016567
Blo14g00121 663 MobiDBLite consensus disorder prediction 635 663 - -
Blo14g00121 663 SUPERFAMILY ARM repeat 355 638 IPR016024 -
Blo14g00121 663 ProSiteProfiles U-box domain profile. 267 341 IPR003613 GO:0004842|GO:0016567
Blo14g00121 663 Pfam Neurochondrin 521 634 IPR008709 -
Blo14g00121 663 Pfam U-box domain 268 338 IPR003613 GO:0004842|GO:0016567
Blo14g00121 663 SMART arm_5 511 551 IPR000225 GO:0005515
Blo14g00121 663 SMART arm_5 552 592 IPR000225 GO:0005515
Blo14g00121 663 SMART arm_5 470 510 IPR000225 GO:0005515
Blo14g00121 663 SMART arm_5 593 634 IPR000225 GO:0005515
Blo14g00121 663 SMART arm_5 429 469 IPR000225 GO:0005515
Blo14g00121 663 SMART arm_5 388 428 IPR000225 GO:0005515
Blo14g00121 663 SUPERFAMILY RING/U-box 265 343 - -
Blo14g00121 663 CDD RING-Ubox_PUB 272 314 IPR045210 -
Blo14g00121 663 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 399 441 IPR000225 GO:0005515
Blo14g00121 663 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 646 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01237 Blo14g00121 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00330 Blo-Chr4:2614351 Blo14g00121 Blo-Chr14:881191 0 dispersed
Blo05g00776 Blo-Chr5:28319056 Blo14g00121 Blo-Chr14:881191 5.38E-09 dispersed
Blo06g00111 Blo-Chr6:4452737 Blo14g00121 Blo-Chr14:881191 1.34E-09 dispersed
Blo06g01023 Blo-Chr6:33512538 Blo14g00121 Blo-Chr14:881191 3.84E-152 dispersed
Blo11g00735 Blo-Chr11:9692416 Blo14g00121 Blo-Chr14:881191 5.20E-149 dispersed
Blo13g00851 Blo-Chr13:31131878 Blo14g00121 Blo-Chr14:881191 2.16E-107 dispersed
Blo14g00121 Blo-Chr14:881191 Blo18g00747 Blo-Chr18:20192362 3.62E-162 dispersed
Blo14g00121 Blo-Chr14:881191 Blo03g01237 Blo-Chr3:38604917 0 wgd
Blo14g00121 Blo-Chr14:881191 Blo03g01130 Blo-Chr3:37761378 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00121 - - pvy:116146246 923.309