Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00136 ATGCCGGGTAAAGGAATGAGGACTGTTTTCTTCAAATCTCAGACGCCTTCGAGTTCTCCAGGCAGAAGTTTGCCGCCGCTTTCTCCTCACCGGACGCTTTCTGAAACTCTAATAGACGAGAGAATCGAGAGAGCGGAGGCTCTCATTACAAAGTGGGATTCTACGCCCTCCACCTCTGTTGGCTTGAGCTTGATGTTCTTTGACAATCGTGAAGATGCCAAACAATATCTTAAATCTGTTAAGGATTTGCAGACTGCTATGCACTCGCTAGCTGCGCAACATATGAGCTCTGAGAAGCTCGTTCGCTCTCAGAATTTGATGCAAACTGCCATGAAGACGCTTGAAAAAGAATTCTACCGGATCTTGTCTGCCAATAGAGACTATTTGGATCCGGAATCAGTTTCCACCCACTCCTCGAGAGCGTCGGAGGTTTCGAGTTTTATCTCTGATTTAGAAGACGATTCGGAGGACGAGTTCCGTTTTGCTACTGAGAACATTTCTGAGGTTGAGCGAGTTTCAATGATTGCTATGGCGGATTTGAAAGCCATTGCTGACTGTATGATCTCGGCCGGTTACGGCAAAGAGTGTGTCAAAATTTACACTGTTGTAAGGAAATCGATTATCGACGAGGGGCTCTACCACCTAGGAGTTGAAAGGCTGACCTTGCACCAGGTTCAGAAGATGGATTGGGAGGTTTTGGAAATTAAGATTAAAAAATGGTTGAAGGCGGTGAAAGCCGCTGTTAGAACTCTTTTTGAGGGGGAGAGAATTCTCTGCGATCACGTCTTCTCCTCTTCCGTCTCTATCAGAGAGTCGTGCTTCAGAGAAATTTGCAAAGACGGAGCGAACAATCTATTTGGATTCCCCGAATTGGTAGCGAAATACAAGAAAACGCCAGAGAAGATTTTTTCAACTCTGGATATCTACGAAGCCATCGCGGATCTCTGGCCGGAGATTGAATCGGTTTTCTCATTCGAAACAACCGCCTTCGTCCGTTCTCAAGTTGTCAATTCGCTAGACAGGCTCGGCGAGGGAGTTCGCGTTATGTTAGCGGATTTCGGAACAGCCATGCAGAAGGACTCGACAAAAACTCCGGTCCCGAGCGGCGGAGTTCACCCGCTTACACGCTACGTTATGAACTACATTTCCTTTCTCTCCGATTACAGTGGGATACTCTCCTATATAGTAGCAGACTGCCCGTTAAAATTGCAATCTCAGTTACCGGAATCTTACTTAAACAGCCTCGAGTCCGACGAAAATCCCTTAACCGTACGGCTTGCATGGCTGATTCTTGTTCTCCTCTGCAAACTCGACGGGAAAGTCCAGCTCTACAACGACGTAGCTCTCTCATACATCTTTCTAGCAAACAACCTGCAATACGTCCTCGTAAAAGTACGCACCTCGAACCTCAAGTTCCTGCTCGGAGATGATTGGATTGCAGAGCATGAGTCAAAGGTCAAACAGTATTCATCAAACTACGAGAGAGTCGGGTGGAGCAAAGTATTCTCATCGCTGCCGGAGAATCCAACGGTGTTGATTTCGCCGGAGGAAGCGAAAGAGTATTTCATCAGGTTCAATGCAGCATTCGAAGAAACGTACCGGAAACAAACTTCGTGGGTAATATCCGACAAAAAACTCCGAGAGGACATCAAAGTCTCTCTCGGAAGGAAACTCGGCAGCCTGTACAGAAACTTTTACGAGAAAAATCGGGTCGTGTTGATAAGAGACTATGGACATGCATCGAGATCCGTGGTAAGATTTGACCCAGATGATATCGGAAACTACTTGTCGGACTTATTCTATGGTGCCGGCAACGAAAGTGCAACTTCAGCCGGGAGTGTTTCATCATCGTCATCTCCGGCGTCTTCTACGTCGTCTCACCGCCGGCGGTTCCTAGGTCGTTGA 1905 47.14 MPGKGMRTVFFKSQTPSSSPGRSLPPLSPHRTLSETLIDERIERAEALITKWDSTPSTSVGLSLMFFDNREDAKQYLKSVKDLQTAMHSLAAQHMSSEKLVRSQNLMQTAMKTLEKEFYRILSANRDYLDPESVSTHSSRASEVSSFISDLEDDSEDEFRFATENISEVERVSMIAMADLKAIADCMISAGYGKECVKIYTVVRKSIIDEGLYHLGVERLTLHQVQKMDWEVLEIKIKKWLKAVKAAVRTLFEGERILCDHVFSSSVSIRESCFREICKDGANNLFGFPELVAKYKKTPEKIFSTLDIYEAIADLWPEIESVFSFETTAFVRSQVVNSLDRLGEGVRVMLADFGTAMQKDSTKTPVPSGGVHPLTRYVMNYISFLSDYSGILSYIVADCPLKLQSQLPESYLNSLESDENPLTVRLAWLILVLLCKLDGKVQLYNDVALSYIFLANNLQYVLVKVRTSNLKFLLGDDWIAEHESKVKQYSSNYERVGWSKVFSSLPENPTVLISPEEAKEYFIRFNAAFEETYRKQTSWVISDKKLREDIKVSLGRKLGSLYRNFYEKNRVVLIRDYGHASRSVVRFDPDDIGNYLSDLFYGAGNESATSAGSVSSSSSPASSTSSHRRRFLGR 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 975521 977425 + BLOR14454 Blo14g00136 69649

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00136 634 MobiDBLite consensus disorder prediction 10 25 - -
Blo14g00136 634 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 610 - -
Blo14g00136 634 Pfam Exo70 exocyst complex subunit 238 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Blo14g00136 634 MobiDBLite consensus disorder prediction 1 31 - -
Blo14g00136 634 Gene3D Exocyst complex component Exo70 63 609 - -
Blo14g00136 634 MobiDBLite consensus disorder prediction 609 634 - -
Blo14g00136 634 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 610 IPR004140 GO:0000145|GO:0006887
Blo14g00136 634 SUPERFAMILY Cullin repeat-like 42 600 IPR016159 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00136 K07195 EXOC7, EXO70; exocyst complex component 7 - jre:109015471 785.023
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo13g01090 Blo14g00136 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00560 Blo-Chr9:16882125 Blo14g00136 Blo-Chr14:975521 0 dispersed
Blo14g00136 Blo-Chr14:975521 Blo16g00265 Blo-Chr16:6254324 2.02E-104 dispersed
Blo13g01090 Blo-Chr13:33019829 Blo14g00136 Blo-Chr14:975521 0 wgd
Blo14g00136 Blo-Chr14:975521 Blo03g01115 Blo-Chr3:37636722 0 wgd
Blo14g00136 Blo-Chr14:975521 Blo04g00295 Blo-Chr4:2282367 0 wgd
Blo14g00136 Blo-Chr14:975521 Blo07g01191 Blo-Chr7:31777476 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g377 . . Bda02g00802 Bda09g01492 Bpe01g00153 . Bma14g00483 . . . . . . . Sed13g1351 Cpe05g00891 . Bhi08g00343 Tan01g2524 Cmetu12g0712 . . . Lcy11g0247 Cla02g01331 Cam02g1412 Cec02g1430 Cco02g1463 Clacu02g1391 Cmu02g1351 Cre02g1670 Cone1ag0674 Cone5ag1180 Cone18ag0321 Cone11ag1266 . Csa06g01715 . Cme11g01259 Blo13g01090 Blo14g00136 Bda07g00609 . Bpe08g00122 Bpe11g00785 Bma07g00116 Bma11g00137 Sed01g0928 Cmo02g00840 Cmo20g00472 Cma02g00839 Cma20g00434 . . . . Bhi10g00657 Tan05g0340 Cmetu11g2447 . Hepe08g0821 . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo13g00674 . 4 642 EXO70 exocyst subunit family AT5G03540 75.8 5.6e-277 950.3
Blo01g01242 . 1 628 EXO70 exocyst subunit family AT5G03540 72.3 6.0e-263 903.7
Blo01g01242 . 1 626 EXO70 exocyst subunit family AT5G52340 79.2 1.3e-286 982.2
Blo13g00674 . 6 642 EXO70 exocyst subunit family AT5G52340 73.3 2.4e-269 924.9
Blo01g01242 . 139 628 EXO70 exocyst subunit family AT5G52350 61.8 2.6e-169 592.4
Blo13g00674 . 141 636 EXO70 exocyst subunit family AT5G52350 58.5 7.1e-159 557.8
Blo14g00063 . 1 630 EXO70 exocyst subunit family AT5G58430 66.7 1.4e-250 862.4
Blo14g00063 . 1 629 EXO70 exocyst subunit family AT1G07000 50.2 9.8e-172 600.5
Blo01g00176 . 54 647 EXO70 exocyst subunit family AT5G13150 50.3 2.0e-162 569.7
Blo06g00756 BCT 8 608 EXO70 exocyst subunit family AT1G72470 63.6 3.8e-214 741.5
Blo05g00033 BCT 7 607 EXO70 exocyst subunit family AT1G72470 61.0 1.8e-200 696.0
Blo06g00756 BCT 9 606 EXO70 exocyst subunit family AT1G54090 62.2 6.5e-211 730.7
Blo05g00033 BCT 7 605 EXO70 exocyst subunit family AT1G54090 59.8 3.8e-203 704.9
Blo06g00756 BCT 2 607 EXO70 exocyst subunit family AT3G14090 62.7 2.3e-216 748.8
Blo05g00033 BCT 2 606 EXO70 exocyst subunit family AT3G14090 61.0 1.7e-206 716.1
Blo16g00265 . 13 648 EXO70 exocyst subunit family AT5G50380 60.9 2.4e-222 768.8
Blo04g01171 . 13 650 EXO70 exocyst subunit family AT5G50380 60.4 3.0e-217 751.9
Blo15g00211 . 13 639 EXO70 exocyst subunit family AT5G50380 56.7 2.2e-199 692.6
Blo12g01102 . 3 674 EXO70 exocyst subunit family AT4G31540 69.3 1.5e-280 962.2
Blo01g01340 . 1 666 EXO70 exocyst subunit family AT4G31540 69.7 6.8e-278 953.4
Blo04g00295 . 42 633 EXO70 exocyst subunit family AT3G55150 50.5 4.8e-161 565.1
Blo07g01191 . 32 609 EXO70 exocyst subunit family AT3G55150 50.7 3.5e-159 558.9
Blo14g00136 BCT 10 602 EXO70 exocyst subunit family AT3G55150 50.5 8.0e-156 547.7
Blo07g01191 . 32 609 EXO70 exocyst subunit family AT2G39380 51.5 9.4e-165 577.4
Blo04g00295 . 22 633 EXO70 exocyst subunit family AT2G39380 50.4 1.6e-164 576.6
Blo07g01191 . 1 615 EXO70 exocyst subunit family AT3G09520 55.2 6.6e-179 624.4
Blo09g00560 . 1 617 EXO70 exocyst subunit family AT3G09520 52.7 2.0e-167 586.3
Blo14g00136 BCT 11 603 EXO70 exocyst subunit family AT5G59730 53.1 2.0e-167 586.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001818 3 2 3 3 3 2 0 2 2 2 2 2 3 2 2 3 2 4 4 2 2 2 2 2 3 3 2 2 2 0 68
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo14g00136 Blo_Chr14 FPKM 6.018198 6.978484 6.147523 6.384669 10.204492 7.302484 10.020699 8.065289 6.125025 8.031764