Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00161 ATGAGGTATTCCGAACCTAGGAGGCGCAAAGTGTCTCTCTCGCGAGGTTCGGAACGCGAGTGGCAAGAGATGAAGAGGGGGAGGAAGAGGCCGTCGTTGTGGCTTTTAAGGGTAGGCAGTGGTTTCTCTCCTGCTTTATCTTTTGGTTGTGTGACAGATGACTTTTTCTATGAATTTAAGTTTTTTTTTTTGAACTTTCATTTGTTTCGCTGTTCTTCGAATTTCGTCGAGAAGGTCCACATTAGCATTGTGGTCATTGGCCATGTCGACTCTGGCAAGTCAACAACCACAGGTCACTTGATTTACAAGCTTGGAGGAATTGACAAGCGTGTGATTGAGAGGTTTGAGAAGGAGGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGTTGGACAAACTCAAGGCTGAGAGGGAGCGTGGTATTACTATTGATATCGCCTTGTGGAAATTTGAGACCACTAAGTACTACTGCACTGTCATTGATGCTCCAGGACACCGTGACTTTATCAAGAACATGATTACTGGCACCTCTCAAGCCGACTGTGCTGTGCTTATTATTGACTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAAGATGGTCAGACCCGTGAGCATGCTTTACTGGCTTTCACTCTTGGTGTGAAGCAGATGATCTGCTGCTGCAACAAGATGGACGCCACTACTCCTAAGTACTCCAAGGGAAGGTATGAGGAAATAGTGAAGGAAGTCTCATCTTATCTCAAAAAGGTAGGTTACAACCCGGAAAAGATCCCTTTTGTACCCATCTCTGGTTTTGAGGGAGACAACATGATTGAGAGGTCGACCAACCTCGACTGGTACAAGGGTCCTACTCTCCTGGAGGCCCTTGACATGATCCAGGAGCCAAAGAGGCCTTCAGACAAGCCTCTGCGTCTCCCTCTTCAGGATGTATACAAGATCGGTGGTATTGGAACTGTGCCCGTTGGACGTGTTGAGACTGGTGTTTTGAAGCCTGGAATTGTGGTCACTTTTGGCCCCACTGGATTGACTACTGAAGTTAAGTCTGTGGAGATGCACCACGAGGCTCTCCAGGAGGCTCTTCCAGGTGATAATGTGGGTTTCAACGTGAAGAACGTTGCTGTGAAGGATCTGAAGCGTGGTTTTGTCGCTTCCAACTCCAAGGATGATCCTGCCAAGGAAGCTGCCAACTTCACCTCTCAGGTGATCATCATGAACCATCCAGGTCAGATCAGCAACGGGTATGCACCAGTTCTTGATTGCCACACCTCCCACATTGCCGTGAAATTTGCCGAGATCTTGACTAAAATCGACAGACGATCTGGAAAAGAACTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGTGACGCAGGAATGGTGAAGATGGTTCCGACCAAACCCATGGTGGTGGAGACATTTTCTGAGTACCCACCTCTTGGTCGTTTTGCTGTGAGAGACATGCGTCAGACTGTGGCTGTCGGCGTTATTAAGAGCGTGGAGAAGAAGGATCCATCTGGTGCCAAGGTCACCAAGTCTGCAGCCAAGAAGGGAGGAAAATGA 1569 48.06 MRYSEPRRRKVSLSRGSEREWQEMKRGRKRPSLWLLRVGSGFSPALSFGCVTDDFFYEFKFFFLNFHLFRCSSNFVEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKKVGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGIVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKGGK 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1223660 1226258 + BLOR14479 Blo14g00161 69674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00161 522 Hamap Elongation factor Tu [tuf]. 75 505 IPR004539 GO:0003746|GO:0005525|GO:0006414
Blo14g00161 522 Gene3D Translation factors 302 389 - -
Blo14g00161 522 PANTHER TRANSLATION FACTOR 77 520 - -
Blo14g00161 522 Pfam Elongation factor Tu domain 2 321 386 IPR004161 GO:0005525
Blo14g00161 522 CDD EF1_alpha_III 396 499 - -
Blo14g00161 522 Gene3D Translation factors 396 503 - -
Blo14g00161 522 CDD EF1_alpha 82 300 - -
Blo14g00161 522 PRINTS GTP-binding elongation factor signature 82 95 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 PRINTS GTP-binding elongation factor signature 141 149 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 PRINTS GTP-binding elongation factor signature 221 230 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 399 502 IPR009001 -
Blo14g00161 522 CDD EF1_alpha_II 303 393 - -
Blo14g00161 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 322 IPR027417 -
Blo14g00161 522 Pfam Elongation factor Tu GTP binding domain 80 294 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 134 149 IPR031157 -
Blo14g00161 522 SUPERFAMILY Translation proteins 299 394 IPR009000 -
Blo14g00161 522 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 78 303 IPR000795 GO:0003924|GO:0005525
Blo14g00161 522 TIGRFAM EF-1_alpha: translation elongation factor EF-1, subunit alpha 77 506 IPR004539 GO:0003746|GO:0005525|GO:0006414
Blo14g00161 522 PANTHER ELONGATION FACTOR 1-ALPHA 77 520 - -
Blo14g00161 522 Pfam Elongation factor Tu C-terminal domain 395 502 IPR004160 -
Blo14g00161 522 Gene3D - 76 299 IPR027417 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01110 Blo14g00161 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00161 Blo-Chr14:1223660 Blo16g00682 Blo-Chr16:26437721 0 dispersed
Blo14g00160 Blo-Chr14:1220991 Blo14g00161 Blo-Chr14:1223660 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00161 K03231 - mesc:110601548 875.544