Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00180 ATGAAGGAGGCGGCCGAGAAGAGCTTGGATCCTAAGCTATGGCACGCCTGCGCCGGCGGGATGGTTCAGATGCCACCGGTGAACTCCAAGGTCTTTTACTTCCCCCAAGGTCACGCCGAACATTCCCAAGCCACCGTCGATTTCGGTTCCGCCCCGAGAATTCCGCCGCTCATTGCTTGCAGAGTCGCCGGAGTGAAGTTCTTAGCCGACCCAGAAAGTGACGAGGTTTTCGCCAAGGTGAAACTGGTTCCTTTAGGAACGAACGAGCTTGATTCTGACGGCGATGGTGGTTATGGAATTAATGGGGCTGAGATTGCAGAAAAGCCTGCTTCTTTTGCGAAGACATTGACTCAATCTGACGCCAACAATGGCGGTGGCTTCTCCGTTCCAAGATACTGTGCAGAGACTATATTTCCACGCCTGGATTACTCTGCTGATCCTCCTGTTCAGACAGTAATCGCCAAGGACATTCACGGAGAAATCTGGAAATTTCGGCATATTTACAGAGGAACCCCTCGACGTCATTTGTTGACCACCGGATGGAGCACTTTCGTCAACCAGAAGAAGCTCGTCGCCGGAGATTCAATTGTCTTTCTGAGAGACGACCGAGGAGAGCTTTGTGTTGGGATCCGGCGAGCCAGCCGGACTAGTGGCTATGCTCTTGATTGCTCTGCGGGGTGGGGTATTGGAGCGGGAAATTGCGCTCCTCCCTATGGGGGATTCTCTATGTTTCTGAAAGGGGACGAAAGCAAATTTATCCGAAATGGGTATTCAAATTCGAGTTCTGGTAGTAATCCGACGAGAAGAGGAAGGGTTTCCCCGGAGTCAGTAATGGAAGGGGTGGCTCTAGCCAGCAGTCGGCGGCCATTTGAGATAGTTTACTACCCTCGAGCCAGCACACCCGAGTTTTGCGTTAGGGCTGCATCTGTCAGGGCCGCCATGACGGTTCAATGGTGCTCTGGCATGAGGTTCAAAATGGCATTCGAAACGGAAGATTCGTCTCGGATTAGCTGGTTCATGGGTACCATTTCTGCTGTTCATGTTGCCGATCCTCTCCACTGGCCTAATTCACCATGGCGGCTTCTCCAGCAAGTCACTTGGGACGAACCCGACTTGCTACAAAACGTGAAGCGCGTCAATCCGTGGTTGGTTGAGCTAGTTCCAAACACACCTGCCATCCACCCCTCGCCTTTCTCACCTCCGAGAAAGAAATTAAGGATACCATCCTTCTCGGAGCCTCCCCTCGATGGCCAATTTGCACAGCCATCCTTCCTCAACAATCCCGTCGGGCCGAGTTTAGGTGATATCACTACTGCAGGCATACAGGGAGCCAGGCATACTCGATTTGGACTAACTTTATCGAATCTCCACATTAACGACAAACTGCAATTGGGGCTGTTTCCCTCCAATCTTCACCCCCTCGATCTACAATATCGAGTTTCCAATCCCAATATCAAAAACGAGGCCCAGACGAAAGAAAAGAGCCGATCGAACTTTCTGACGATGGGAAATTCTTGCGAGAAATCGGACAAATCTGAAAATGTGAAGCGGCACCAGTTCATACTCTTTGGTCAGCCTATCGTTACAGAGCAGCAAATATCGATTGATTCGTCGACAGAGAAAGCAAAACCTCTTCTTCCTAATGGTTCTGAACTTGGAGTAGATATCGGCCTGTGCAAGGTATTCATGGAGTCTGAAGATGTGGGCCTGACCCTCGATCTTTCTGCTTTCAGCTCTTTCGACGAGCTTTATAAACGAATTGCCACCATTTTCGGAGTTGAAACATCAGACGGAAGCAAGATCGTGCTTTACCAGGATTTAGCCGGTTCTGTTAAACACATCGGCGACGAACCCTTCAGTGATTTTAAAAGAACAGCAAAGAGACTTGAAATTCTGAAAACCCCTGCAAACATCGATACTAAAAGGACGTGGGCTGCAAGAATGCGAAACACGGGTAGGGGACTCGATGCATCGAATAAGCGAGGACCCTTGACCATATTTGCCTAA 2007 49.98 MKEAAEKSLDPKLWHACAGGMVQMPPVNSKVFYFPQGHAEHSQATVDFGSAPRIPPLIACRVAGVKFLADPESDEVFAKVKLVPLGTNELDSDGDGGYGINGAEIAEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDIHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRDDRGELCVGIRRASRTSGYALDCSAGWGIGAGNCAPPYGGFSMFLKGDESKFIRNGYSNSSSGSNPTRRGRVSPESVMEGVALASSRRPFEIVYYPRASTPEFCVRAASVRAAMTVQWCSGMRFKMAFETEDSSRISWFMGTISAVHVADPLHWPNSPWRLLQQVTWDEPDLLQNVKRVNPWLVELVPNTPAIHPSPFSPPRKKLRIPSFSEPPLDGQFAQPSFLNNPVGPSLGDITTAGIQGARHTRFGLTLSNLHINDKLQLGLFPSNLHPLDLQYRVSNPNIKNEAQTKEKSRSNFLTMGNSCEKSDKSENVKRHQFILFGQPIVTEQQISIDSSTEKAKPLLPNGSELGVDIGLCKVFMESEDVGLTLDLSAFSSFDELYKRIATIFGVETSDGSKIVLYQDLAGSVKHIGDEPFSDFKRTAKRLEILKTPANIDTKRTWAARMRNTGRGLDASNKRGPLTIFA 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1411907 1414356 - BLOR14498 Blo14g00180 69693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00180 668 ProSiteProfiles PB1 domain profile. 556 636 IPR000270 GO:0005515
Blo14g00180 668 PANTHER AUXIN RESPONSE FACTOR 552 645 - -
Blo14g00180 668 MobiDBLite consensus disorder prediction 256 271 - -
Blo14g00180 668 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 552 645 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo14g00180 668 SMART B3_2 112 214 IPR003340 GO:0003677
Blo14g00180 668 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 538 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo14g00180 668 PANTHER AUXIN RESPONSE FACTOR 5 538 - -
Blo14g00180 668 CDD B3_DNA 111 212 IPR003340 GO:0003677
Blo14g00180 668 Pfam Auxin response factor 282 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo14g00180 668 ProSiteProfiles B3 DNA-binding domain profile. 112 214 IPR003340 GO:0003677
Blo14g00180 668 MobiDBLite consensus disorder prediction 256 275 - -
Blo14g00180 668 Gene3D - 556 638 - -
Blo14g00180 668 SUPERFAMILY DNA-binding pseudobarrel domain 110 215 IPR015300 -
Blo14g00180 668 Pfam B3 DNA binding domain 112 213 IPR003340 GO:0003677
Blo14g00180 668 Gene3D - 317 390 - -
Blo14g00180 668 Gene3D - 110 213 IPR015300 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo13g01118 Blo14g00180 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00180 Blo-Chr14:1411907 Blo18g00211 Blo-Chr18:2065513 2.37E-120 dispersed
Blo01g01167 Blo-Chr1:42834256 Blo14g00180 Blo-Chr14:1411907 0 wgd
Blo12g00469 Blo-Chr12:22231390 Blo14g00180 Blo-Chr14:1411907 0 wgd
Blo13g00924 Blo-Chr13:31721951 Blo14g00180 Blo-Chr14:1411907 2.70E-171 wgd
Blo14g00180 Blo-Chr14:1411907 Blo04g00070 Blo-Chr4:598266 7.80E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13231 PF02362 B3 7.20E-22 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00180 - - qsu:111995036 882.093