Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00204 ATGCAAGCGGCTCTAGCGGCAATGGCTGCCCAAACAGTCCTCTCTGCTTCCCCTTCCCAACTTACCCTTTTCTCTCCATTCGCTAATCCAATCTCACCACCCCCTTTTAAGTCCTCCTTCAATGGAGTCTCCGTGCAGACCCTCCGCCCGCCTACTGCTCTCACCGCTTCCGTTGCCCCCAAACCTCTGGCGGTCGTCGCCGTCTCCAGAAAAGCTGTTTCTGTTCTCAAGGGTAGTTCCAGTGTTGAAGGCGTTGTCACGTTGACCCAGAACGACGACGGACCTACAACTGTGAAAGTTCGCATTACCGGCCTCGTTCCAGGGCCGCACGGATTCCACCTCCACGAGTTTGGTGACACAACCAACGGATGCATTTCAACCGGAGCGCATTTCAATCCGAATAGTCTCACACACGGTGCTCCGGGAGATGAAATTCGTCATGCGGGTGACCTGGGAAACATAATTGCTAACTCGGATGGAGTGGCAGAGGCAACAATTGTCGATAACCAGAGTGGTTATTTGCAGATACCACTAAGCGGTCCGAATTCGGTAATTGGAAGAGCCCTTGTGGTTCATGAGCTTGAGGATGATCTTGGAAAAGGTGGGCATGAACTCAGTTTGACCACTGGCAATGCAGGCGGAAGATTGGCTTGTGAATATCAATTTGTGGAATTGCATGATAAAGATCAGAAGGTGATGATCGGAAGCAAACGCAGCAAACGCCTGAGGCTATCGTCACCGACTGATAGCACCGCCGGGACGAGCGGAGGAGAAGAAAATTTTAGCTCAACTTGGTCTATGACAACGTCCGGAGAGGGTGAGGACAGTACAGAAGAAGAGGAAGACATGGCTAATTGCTTGATTCTCTTAGCTCAAGGCGATGGTCCAAAAGAGACGGCCAAAAGTGTTCCACGGTTTGACGAGATGGCTCGAACCGCCATAGCCAAGGGTAGCTTTTATGGGTACGAGTGCAAGACTTGTAACAGAGCCTTCCCTTCTTTCCAAGCACTTGGTGGTCACAGGGCTAGCCACAAGAAGCTCAAGCTCAGTCCCACCTCCATCGCCTCCATTGGAGAGAAGATGAAAAAGCTTTCATCTTTTACATACCCAGATGAAACAGAAGAAGCAAAATTCAACGAGAAGATGAATCCAAACAAGGGTAAACTCCACGAGTGTTCGATTTGTGGTCAAGAGTTCAGTTCAGGCCAAGCTTTAGGAGGTCATATGAGAAGACACAGAGCGCAGGCAGCCACGGTAAGCGACGAAGCTAAACAGATGAAACGGCCAAATATTCTAGCGTTGGATCTCAATCTTCCAGCCCCGGAAGATGATCTCCGGGACACTGTGTTCCAGTTTCCGGCGACCCAACAGGCGCTGGTTTTCCCATCTCCTGCTTTAGTCGATTGTTACTACTGA 1416 50.49 MQAALAAMAAQTVLSASPSQLTLFSPFANPISPPPFKSSFNGVSVQTLRPPTALTASVAPKPLAVVAVSRKAVSVLKGSSSVEGVVTLTQNDDGPTTVKVRITGLVPGPHGFHLHEFGDTTNGCISTGAHFNPNSLTHGAPGDEIRHAGDLGNIIANSDGVAEATIVDNQSGYLQIPLSGPNSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACEYQFVELHDKDQKVMIGSKRSKRLRLSSPTDSTAGTSGGEENFSSTWSMTTSGEGEDSTEEEEDMANCLILLAQGDGPKETAKSVPRFDEMARTAIAKGSFYGYECKTCNRAFPSFQALGGHRASHKKLKLSPTSIASIGEKMKKLSSFTYPDETEEAKFNEKMNPNKGKLHECSICGQEFSSGQALGGHMRRHRAQAATVSDEAKQMKRPNILALDLNLPAPEDDLRDTVFQFPATQQALVFPSPALVDCYY 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1732744 1737087 + BLOR14522 Blo14g00204 69717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00204 471 PRINTS Cu-Zn-superoxide dismutase family signature 196 222 IPR001424 GO:0006801|GO:0046872
Blo14g00204 471 PRINTS Cu-Zn-superoxide dismutase family signature 111 133 IPR001424 GO:0006801|GO:0046872
Blo14g00204 471 PRINTS Cu-Zn-superoxide dismutase family signature 147 156 IPR001424 GO:0006801|GO:0046872
Blo14g00204 471 Gene3D Superoxide dismutase, copper/zinc binding domain 68 220 IPR036423 GO:0006801|GO:0046872
Blo14g00204 471 SUPERFAMILY beta-beta-alpha zinc fingers 322 412 IPR036236 -
Blo14g00204 471 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 111 121 IPR018152 -
Blo14g00204 471 CDD Cu-Zn_Superoxide_Dismutase 71 218 IPR001424 GO:0006801|GO:0046872
Blo14g00204 471 SMART c2h2final6 390 412 IPR013087 -
Blo14g00204 471 SMART c2h2final6 322 344 IPR013087 -
Blo14g00204 471 MobiDBLite consensus disorder prediction 238 281 - -
Blo14g00204 471 ProSitePatterns Zinc finger C2H2 type domain signature. 324 344 IPR013087 -
Blo14g00204 471 MobiDBLite consensus disorder prediction 245 272 - -
Blo14g00204 471 Gene3D Classic Zinc Finger 320 412 - -
Blo14g00204 471 ProSiteProfiles Zinc finger C2H2 type domain profile. 322 349 IPR013087 -
Blo14g00204 471 Pfam C2H2-type zinc finger 322 346 - -
Blo14g00204 471 Pfam C2H2-type zinc finger 390 415 - -
Blo14g00204 471 PANTHER GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 15-LIKE 228 471 - -
Blo14g00204 471 Pfam Copper/zinc superoxide dismutase (SODC) 82 218 IPR001424 GO:0006801|GO:0046872
Blo14g00204 471 ProSitePatterns Zinc finger C2H2 type domain signature. 392 412 IPR013087 -
Blo14g00204 471 PANTHER ZINC FINGER PROTEIN ZAT5 228 471 - -
Blo14g00204 471 SUPERFAMILY Cu,Zn superoxide dismutase-like 71 218 IPR036423 GO:0006801|GO:0046872
Blo14g00204 471 ProSiteProfiles Zinc finger C2H2 type domain profile. 390 417 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01075 Blo14g00204 CCT
Blo03g01075 Blo14g00204 ECH
Blo08g00022 Blo14g00204 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00486 Blo-Chr12:22617413 Blo14g00204 Blo-Chr14:1732744 1.08E-48 dispersed
Blo14g00132 Blo-Chr14:938940 Blo14g00204 Blo-Chr14:1732744 1.59E-17 dispersed
Blo14g00204 Blo-Chr14:1732744 Blo17g00607 Blo-Chr17:12001629 5.74E-58 dispersed
Blo18g00718 Blo-Chr18:17808813 Blo14g00204 Blo-Chr14:1732744 2.94E-21 dispersed
Blo03g00183 Blo-Chr3:4488143 Blo14g00204 Blo-Chr14:1732744 2.77E-09 transposed
Blo01g01186 Blo-Chr1:43841428 Blo14g00204 Blo-Chr14:1732744 6.56E-47 wgd
Blo13g00935 Blo-Chr13:31809209 Blo14g00204 Blo-Chr14:1732744 6.53E-41 wgd
Blo14g00204 Blo-Chr14:1732744 Blo03g01075 Blo-Chr3:37137528 8.88E-68 wgd
Blo14g00204 Blo-Chr14:1732744 Blo04g00054 Blo-Chr4:460584 2.50E-38 wgd
Blo14g00204 Blo-Chr14:1732744 Blo08g00022 Blo-Chr8:206132 1.73E-119 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13234 PF00080 Sod_Cu 1.60E-40 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00204 K04565 - pvy:116117021 311.612