Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00223 ATGAGCGATAGTCGTAAATGGAGTCGTTCCGATAAGCGGAGCTCTAAGAAGCAGAAAGTAATTCGGACGGCCGAAGAAGAGCTTGAGTCCAAACTAGGGTTTGATGTATTCTCCGAAGGCGAAAAAAGACTTGGATGGTTACTAACTTTCGCTTCCTCATCTTGGGAGGATCAGGACACCAAGAACGTCTATAGCTGTGTTGATCTATATTTTGTCACACAGGATGGCACCAGTTTTAAATCAAAATATAAATTCCGCCCATATTTCTATGCAGCTACAAAGCATAAAATGGAAATGGATGTTGAAGCATATTTGAGACGACGTTATGAATGTCAAATTGCTGATATTGAAATTATAGAAAAAGAGGACCTTGATCTTCTTTTGCTTCTTTGTTTTCATGGTGCTCGTAGTACATCAAAATTGGGCATTGTAGCCATTATTTTAAGTTCTGATATATGTGCTGTGTCTGGTGAGGGATTTTGGTATCCTTGTTTGATGCAGAAAAACCATCTGTCTGGCTTGCGCAAGTCCTATCTAAAGCTATGTTTTGATACCATTCAAGATTTGATGCATGTGAAAAGTGAACTTATGCATGTCATTGAAAGAAATAGGGCAAAATCTGATGCTGCAGAAGCTTATGATTCAATATTATCTGGAAAAAGAGAACAAAGACTCCAAGATTCTCTAGAATGTATTGTGGATCTTCGAGAGTATGATGTTCCTTACCATGTTCGTTTCGCTATTGATAATGATATACGATGTGGACAGTGGTATGATGTCAGCGTATCCAGCACTGGGGTTAAGCTTGAGAGAAGGACAGATCTTCTGCAACGTGCTGAAGTACACATATGTGCCTTTGATATTGAAACCACAAAACTTCCATTGAAATTCCCAGATGCTGAATATGATAGTGTAATGATGATTTCATATATGGTTGATGGCCAAGGGTATCTGATCATCAACAGAGAGTGTGTTGGGGATGACATAGAGGATTTGGAATACACTCCAAAACCAGAATTTGAAGGGTTCTTTAAAGTGAAGAATGTAAAAACCGAGTTAGAGCTTCTTAGACAGTGGTTCACCCATATGCAAGAGGTGAAGCCTGGCATCTACGTCACATATAATGGTGATTATTTTGATTGGCCGTTCCTAGAAACCAGAGCTGCCTTTCATGGATTTAGAATGAATGATGAATTAGGATTTCAATGCGACAAGAATCAGGGAGAATGCCGTGCAAAATTTGCTTGTCATTTGGATTGCTTTGCATGGGTAAAGCGGGATAGTTATCTTCCTCAAGGTAGCCAAGGCCTGAAGGCTGTAACTAAGGCAAAATTGGGATATGATCCCCTTGAGGTGAATCCTGAAGATATGGTTCGCTTAGCAAAAGAAATGCCTCAGATGATGGCCTCTTATTCCGTATCTGATGCTGTTGCCACATACTACTTGTATATGACATACGTCCATCCTTTCATTTTTTCTCTAGCTACCATTATTCCAATGTCACCTGATGAGGTTTTGCGTAAGGGTAGTGGGACTCTATGTGAAATGCTTCTTATGGTCCAGGCTTACAAAGCAAATGTTATATGTCCTAACAAGCATCAGAATGATCCAGAGAAGTTCTGTAACAATAGGCTTCTTGAGAGTGAAACATATATAGGAGGCCATGTGGAATGCCTTGAGAGTGGTGTTTTTAGATCTGACCTTCCAACTAGTTTTAGGCTCGATCCAGAAGCATATGATCTGCTGATAAAAAACTTGGATAGAGATCTGCATTATGCTATAAGAGTAGAAGGTAAGATGGACTTAGAACTAGTGTCAAATTACGAAGAAGTGAAGAAAGCTATTATGGAAAAGCTTGTGATGTTGCGGGACAAACCTGTACATGAAGAATGCCCTCTTATATATCATCTTGATGTAGCTGCCATGTATCCAAATATTATTCTTACAAACAGGCTTCAGCCACCATCAATAGTTATAGATGAGGTTTGTACTGCTTGTGATTTCAACCGGCCTGGAAAAACTTGTCTGAGAAAACTTGAATGGGTATGGCGTGGCGAGGTCTTCATGGCTAAAAAAAGCGATTATTATCACTTGAAGAAACAAATTGAGTCAGAGTTTGTTGACAATGGCGACAATAAGTTTTCAAAATCTTTTCTTGACCTGCCTAAAATGGAGCAGGAAGTAAAGCTTAAAGAGCGATTAAAGAAATATTGTCAAAAGGCATATAAAAGAGTGCTTGACAAGCCAGTCACTGAACTTCGAGAAGCAGGGATCTGTATGAGAGAAAATTCCTTTTACGTTGACACTGTTCGCAGGAGGTATGAATACAAAGGACTAAATAAGGCTTGGAAGGGAAAGCTGTCTGAAGCCAAAGCTAGTGGAAATTCTATCAAGATCCAGGAAGCGCAAGATATGGTAATTCTATATGATTCGTTACAGCTAGCTCACAAATGTATACTTAACTCCTTCTATGGATATGTTATGCGGAAGGGAGCAAGATGGTACTCTATGGAAATGGCTGGGGTTGTTACATATACTGGAGCAAAAATCATACAGAATGCTCGTTTACTAATTGAAAAAATTGGAAAACCACTTGAACTTGACACAGATGGTATTTGGTGTGCACTACCTGGATCTTTTCCGGAGAACTTTACTTTCAAAACAAAAGATCTGAAGAAGAAGCTCACGATCTCATATCCATGTGTGATGCTTAATGTTGACGTGGCATTGAACAATACAAATGATCAATATCAGGTTCTCACAGACCCTGTCAATAAAATATATTCAACTCATAGTGAATGCTCCATCGAGTTTGAAGTGGATGGACCATACAAGGCAATGATTCTTCCTGCTTCAAAGGAAGAGGGTATTTTGATTAAGAAGAGATATGCTGTGTTTAATGATGATGGGACACTTGCTGAGCTGAAAGGTTTTGAGATCAAACGAAGAGGCGAGCTCAAACTCATCAAAGTTTTTCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGGTCAACTCTGGAGGAATGCTATTCATCTGTTGCTGCAGTTGCAAATAGATGGCTTGATCTTCTAGATAATCAAGGAAAAGACGTGGCTGATAGCGAGTTGCTTGATTACATATCCGAATCAAGTACAATGAGCAAGTCTTTGGCAGAATATGGTGAACAAAAATCATGTGCTGTGACGACTGCTCGACGACTTGCTGATTTTCTCGGGGATACAATGATCAAAGATAAAGGCCTACGTTGTGCATACATCGTTGCATGTGAACCAAAGGGAACACCTGTAAGTGAACGTGCTGTTCCTGTTGCTATATTTGAGACTGATGCAGATATCGTGAAGTTTTATGTACGAAAATGGTGCAAGATTTCATCAGAAGTTGGCATTAGATCCATTATTGACTGGTCTTATTACAAGCAACGGCTTTGTTCAGCAATTCAAAAAATCATAACAATTCCTGCTGCCATGCAAAAGGTTGCTAACCCTGTCCCTAGAGTAGTTCATCCTGATTGGCTGTATAAAAAGGTTCGTGAGAAGGATGACAAATTTCGGCAACGGAAGCTTGTTGATATATTCAACACCTCGAGGAAGGATACCTTTTCAAAAAAGGATGGTGTTTCAACCTTCACCAATCATGTTATTAATGAAGAGAATGCTGACGATATAGAAGATTTCCAAAAGAAAATAGACTCTGTAGATAGACCAAGACCCATTGTTCATTGCCATAAAAATAGTGCCGTGAGAAATCCAGTCAATGGAAGTGTACAGATGGATTCCCTGGAACAGAAAAGACATAAAGTGCATGAACCAACTTCACCAAGACATTTAAAAAATGTTGACAGAAAGTTGGATTACCAGGGGTGGCTTGAAACTGAGAAAATCAGGTGGAAGGATACTTTGGACAGGAGGAAGAAGCAGAGATTGGCAAATTCAAGGATTCCACTTCATGCTGATGGAGTTGGTCGGCTGGGGATTTCTATGAGTCATAAAGAAGGTCAAGGAAGAAAAGGAGTTAGTTCATATTTTAAGAGAAATGATATAGCCTTAACAAACTGCTATTGGCAGATTTTACAGCTCGTTCCAGGTTCAAAGAGTGGACAATTTTTTGCATGGGTTGTTGTTGAAGGAGTCATGCTTAAAGTTCCCATTACTGTTCCTAGAGTGTTTTACCTCAACTCCAAGGCTCCTATAGCAGAAACATTTGTAGCAAGGCATGTTAACAAGATCCTTCCTCATGGAAGGCATAACAATAATCTCTATGAGGTTGTTATTGATGAAAGCCAATTTAAGACACAGAGCCACAAGCTTGCAGCTCTTCTTGCAGATCCTGAAGTTGAGGGGATTTATGAAACCAAACTACCATTGGACTATAATTCCATCCTCCACCTGGGTTGTGTCTGTAAACCTGATAAAACTGCTAAGAAACAGACTCTTCTGGACGAGTGGAATCTGAATGAACTGCACATGAAGACTACAACAGAATACAATTATTTGGAAAAATCCATCTCTTTCTTCTACTTGTATAATAGCATCTCGGAGGGACGGGCTTTGTATATTGCATACTTTCCTGCCTCAAGATCCATATATGTGGTGGTGGTTAATCCATATCAAAACAAAGATCTGTCGCCAGCTTTTCTGGAAAAACTATTTCGTGAAGCTTGCCAAGTGTTCTCTATTCCAGTCAGTGGTATCATCTTCAAGGTTGACTATGTTGGACGTGTCAAAGATGCTGAAATATTTATGCAGCGAGCAATAACTGAGTACAGACTTGAACATGATGGACCTGCAATAGCTGTCATTGAGAGTCCAATTGCTCAGCTGCTTAAGTCAGGCATACGAGCTCTAGATGACTTCCCATGTGTGAACATTCCATCCAATGCTCGTGATTGCCAATATCAGGTTCTTGGTTGGCAACAAGTGGCTGCGAAAATTGGAATGCAACGTTGTTCTGCTTCATGCCAGTGGTTGAATGAGCGGATTTCTCTCGCCAGATATGCTCATGTGCCATTGGGAAATTTTGAACTTGATTGGCTAATATTTACAGCAGATATCTTCTTTTCCAGAGCATTACGTGATAAGCAACAGGTACTTTGGATATCAAATGATGGGGTTCCAGATCTAGGGGGAATTAGTGAAGAAGATACATGTTTTGTTGATGAGGTTCAGCAGCCTGTTTTAACATATCCTGGAGCATATAGAAAAGTTGCCGTGGAGCTTAAAATTCATCACCTAGCTGTTGACGCTCTTCTAAAGAGCAACCAAATAAATGAGTTGGAAGGTGGTGTTTTATTTGGATTTGACCAGGACGTGAATGCAGGATCACAAAGTTTGCATGAACAAGGTGGATTTGATGAGGCCGCCTCATGTGCGCCAGTATTTCGTGTTCTTAAACAGTTCGTACAGAGATGCCTTGCTGATGCAGTAACATCTGGAAATGTGTATGCTGATGCAATACTTCAGCACCTATATAGATGGATTTGCAGTCCCCAATCAAGACTTCATGACCCAGCTATTCATCGTACACTTCATAAGGTAATCATGCAAAAAGTTTTTGCTTTAGTCTTGGCTGAGTTACGCAAATTGGGTGCTACTATCATTTTTGCCAACTTCTCAAGGGTAATTATAGACACGGGAAAGTTAGATCTCTCCGCTGCCAAAGCTTACTGCGATAGTGTGCTTACAACATTGCAAACTAGAGATCTATTTGAATGGATTGAGCTGGAACCAGTACAATTTTGGCATTCTTTGTTGTTTATGGATCAGTACAATTATGGAGGAATCCCTGCAAAAGATAATGAATCTGTTCAGGATGAATCACAAGTGGATATTGTATCTAGCTGGAATATTGCTGAATACTTGCCAAAGAAAATTCAGGATCATTTTGTTTTTATTATCTCTCAATTTTTATACATTCCCTGGAAATATTCAACAAAACAAGCTTCTATTAGAACATCTTTGCAGCATAGCGACTCATGCACGCCATCTATCACAGTTGTAGCTGCCGAATCCTTGGAGTCACATATGACGGAGTATCTAAAGGGGGAGATTAGCTCCTACTTCACTGAAAAACTACTTGGAATAGTTCGTGATATTGTTTGTCATATGAAGGGTATCAATAAAACTGATAGTGATCAACATAGTTTGTCTGGGATTCCACAACGTTCTGGTAGCAGCCACAAAGGGGATGCTGCTCTGGAGTTCATTAAGCATACCTGTGCTGTTTTGGCACTAGATCAAACTGTTCAGCATGATGTTCTGGTGCTAAGAAAGAATTTGCTGAAATACGTTCATGTAAGGGAGTTTGCTCCAGAAGCTGAGTTTTTTGATCCCTGCTCGTCCTTCATCCTGCCAAATGTCATTTGCAGCTATTGCAACGACTGTCGGGATATGGACTTGTGTCGCGACTCAGCTTTGCAGACGCAGGATTGGTGCTGTGCTGTGCCACAATGCGGCCAACCCTACAACCGGGAGGTGATGGAGAATGCTCTTCTTCAAATTGTAAGGCAGAGAGAGCGTGCATTTCACCTACAGGACGTTGTATGTATCAGGTGTAAGCAGGTAAAAGCTGCTCATTTAGCTGAGCAATGCGCGTGTGCCGGCTCATTTAAATGCAGGGAAGATGTCACAGAGTTTCGCAGCAAGATGAAGATTTTCTTTGGCATTGCTGTTCGTCAGAAGTTTCAACTTCTCCAAGAGTGTACTTCATGGATTTTAGAAGATCGCTGA 6726 40.31 MSDSRKWSRSDKRSSKKQKVIRTAEEELESKLGFDVFSEGEKRLGWLLTFASSSWEDQDTKNVYSCVDLYFVTQDGTSFKSKYKFRPYFYAATKHKMEMDVEAYLRRRYECQIADIEIIEKEDLDLLLLLCFHGARSTSKLGIVAIILSSDICAVSGEGFWYPCLMQKNHLSGLRKSYLKLCFDTIQDLMHVKSELMHVIERNRAKSDAAEAYDSILSGKREQRLQDSLECIVDLREYDVPYHVRFAIDNDIRCGQWYDVSVSSTGVKLERRTDLLQRAEVHICAFDIETTKLPLKFPDAEYDSVMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEFEGFFKVKNVKTELELLRQWFTHMQEVKPGIYVTYNGDYFDWPFLETRAAFHGFRMNDELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRLAKEMPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQNDPEKFCNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPEAYDLLIKNLDRDLHYAIRVEGKMDLELVSNYEEVKKAIMEKLVMLRDKPVHEECPLIYHLDVAAMYPNIILTNRLQPPSIVIDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDNGDNKFSKSFLDLPKMEQEVKLKERLKKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRRRYEYKGLNKAWKGKLSEAKASGNSIKIQEAQDMVILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVALNNTNDQYQVLTDPVNKIYSTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSSVAAVANRWLDLLDNQGKDVADSELLDYISESSTMSKSLAEYGEQKSCAVTTARRLADFLGDTMIKDKGLRCAYIVACEPKGTPVSERAVPVAIFETDADIVKFYVRKWCKISSEVGIRSIIDWSYYKQRLCSAIQKIITIPAAMQKVANPVPRVVHPDWLYKKVREKDDKFRQRKLVDIFNTSRKDTFSKKDGVSTFTNHVINEENADDIEDFQKKIDSVDRPRPIVHCHKNSAVRNPVNGSVQMDSLEQKRHKVHEPTSPRHLKNVDRKLDYQGWLETEKIRWKDTLDRRKKQRLANSRIPLHADGVGRLGISMSHKEGQGRKGVSSYFKRNDIALTNCYWQILQLVPGSKSGQFFAWVVVEGVMLKVPITVPRVFYLNSKAPIAETFVARHVNKILPHGRHNNNLYEVVIDESQFKTQSHKLAALLADPEVEGIYETKLPLDYNSILHLGCVCKPDKTAKKQTLLDEWNLNELHMKTTTEYNYLEKSISFFYLYNSISEGRALYIAYFPASRSIYVVVVNPYQNKDLSPAFLEKLFREACQVFSIPVSGIIFKVDYVGRVKDAEIFMQRAITEYRLEHDGPAIAVIESPIAQLLKSGIRALDDFPCVNIPSNARDCQYQVLGWQQVAAKIGMQRCSASCQWLNERISLARYAHVPLGNFELDWLIFTADIFFSRALRDKQQVLWISNDGVPDLGGISEEDTCFVDEVQQPVLTYPGAYRKVAVELKIHHLAVDALLKSNQINELEGGVLFGFDQDVNAGSQSLHEQGGFDEAASCAPVFRVLKQFVQRCLADAVTSGNVYADAILQHLYRWICSPQSRLHDPAIHRTLHKVIMQKVFALVLAELRKLGATIIFANFSRVIIDTGKLDLSAAKAYCDSVLTTLQTRDLFEWIELEPVQFWHSLLFMDQYNYGGIPAKDNESVQDESQVDIVSSWNIAEYLPKKIQDHFVFIISQFLYIPWKYSTKQASIRTSLQHSDSCTPSITVVAAESLESHMTEYLKGEISSYFTEKLLGIVRDIVCHMKGINKTDSDQHSLSGIPQRSGSSHKGDAALEFIKHTCAVLALDQTVQHDVLVLRKNLLKYVHVREFAPEAEFFDPCSSFILPNVICSYCNDCRDMDLCRDSALQTQDWCCAVPQCGQPYNREVMENALLQIVRQRERAFHLQDVVCIRCKQVKAAHLAEQCACAGSFKCREDVTEFRSKMKIFFGIAVRQKFQLLQECTSWILEDR 2241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1945742 1979692 + BLOR14541 Blo14g00223 69736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00223 2241 Pfam Domain of unknown function (DUF1744) 1562 1927 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Blo14g00223 2241 CDD DNA_polB_epsilon_exo 280 484 - -
Blo14g00223 2241 Gene3D DNA Polymerase, chain B, domain 1 159 273 - -
Blo14g00223 2241 SMART polmehr3 279 878 IPR006172 GO:0000166|GO:0003676|GO:0003887
Blo14g00223 2241 Pfam DNA polymerase family B 795 1109 IPR006134 GO:0000166|GO:0003677
Blo14g00223 2241 SMART DUF1744_2 1545 1927 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Blo14g00223 2241 SUPERFAMILY DNA/RNA polymerases 509 1173 IPR043502 -
Blo14g00223 2241 Gene3D - 977 1161 IPR042087 -
Blo14g00223 2241 SUPERFAMILY Ribonuclease H-like 65 530 IPR012337 -
Blo14g00223 2241 Gene3D - 278 508 IPR036397 GO:0003676
Blo14g00223 2241 Pfam DNA polymerase family B, exonuclease domain 73 440 IPR006133 -
Blo14g00223 2241 CDD POLBc_epsilon 543 1158 - -
Blo14g00223 2241 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 31 126 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Blo14g00223 2241 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 166 2238 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Blo14g00223 2241 Gene3D Palm domain of DNA polymerase 606 973 IPR023211 -
Blo14g00223 2241 Gene3D DNA Polymerase, chain B, domain 1 55 141 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00223 K02324 - qsu:111996722 3600.83