Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo14g00243 | ATGTCTGGCTCACCGACTCCGAACTCATCGGAGCATAAGCCTGAGCAGATCGCGCCCCCTCTGAAGCGCCAGCTTCCTTGTTCTTCTATGAAGCCGCCATTTGCAGCTTTTGAGGACTATCACCGCTTCTCCATCGACACTCACGGAATCGCTGATCAATATTCTGAGGGCATTGTTGTTAAATCTCCGCAATTAAAGAGAAAAAGCGGCATGCCAGATTTCGAAGCTGAGTCTAGTGATGGGGCAATTGTTCCTCGATTCACTGAAGTATCCAACAGCCCTCTTCAAACACCTGGATCCATAAAAGGAGGAAAGGGAAGCAAATCAAGGCTTACAAAGTGCACTAGATCAGTACCTCAAACTCTTGTTTCAAATGTAGTGACAGGTTCACCTTCTGGCAACAATCTCACACCAGCAGGTCCATGCCGATATGACAGTTCCCTAGGTCTCTTGACGAAAAAGTTTATCAACTTGATCAAACAAGCAGAAGATGGTATCCTTGACCTCAATAAAGCTGCAGACACATTAGAGGTGCAAAAAAGGAGAATATATGATATAACAAATGTCCTTGAAGGAATTGGTCTGATAGAAAAGAAGCTGAAGAACAGAATTCAGTGGAAGGGGCTTGATGTCTTAAAGCCAGGGGATGATGACGAAAATTTTACTAATTTACAAGCAGATATCGAAAACCTTTCCATTGAGGAGCGTGGATTAGATGAACAAATAAGACAAATGCAAGAAAGATTACGGGGCCTCAGTGAAACTGAGAACAATCAAAGGTGGCTTTTTGTCACTGAGGAAGATATCAAAGGTTTGCCTTGCTTCCAGAATGAAACGTTGATAGCTATCAAGGCTCCACATGGGACTATGTTAGAAGTACCCAATCCTGATGAGGCTGTTGACTATCCCCAGAGGAGGTACAGGATAGTCCTCAGAAGCACCATGGGTCCTATAGATGTTTACCTTGTTAGTCAATTTGAAGAGAAATTTGAGGAGGTTAACGGTGTTGAAGTACCTCTGATCTCAAACTTGCCTTCAACTTCCGGATATAGTGAGGCTCCCGCAACAGCAATGGAAGTAGAAGATAGCAGAGGGAAGGATATTGGAATGCACGAGCCAGATGTTCACCAAATGTGTTCGGATCTTAATGATTCACAGGACTTTGTGGGAGGGATCATGAAGATTGTTCCCTCGGTAGTGGATAGTGATGCTGATTACTGGCTTCTATCAGACGCAGATGTTAGCATTACTGACATATGGAGAACTGAAACTGGTGTTGAATGGGATGATTTGGGTACACTTCATGAGGATTATCCTATGACCAGCATTGATGAGATAGCCAATGTCGAATTGCCTCTTCCACAGGCTTCACCAGCCCGGTCTGTTGCAGAGGAATTGCCTTCTAATTCTAAACCTTCTGGA | 1422 | 44.02 | MSGSPTPNSSEHKPEQIAPPLKRQLPCSSMKPPFAAFEDYHRFSIDTHGIADQYSEGIVVKSPQLKRKSGMPDFEAESSDGAIVPRFTEVSNSPLQTPGSIKGGKGSKSRLTKCTRSVPQTLVSNVVTGSPSGNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVLKPGDDDENFTNLQADIENLSIEERGLDEQIRQMQERLRGLSETENNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTMLEVPNPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEVNGVEVPLISNLPSTSGYSEAPATAMEVEDSRGKDIGMHEPDVHQMCSDLNDSQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDIWRTETGVEWDDLGTLHEDYPMTSIDEIANVELPLPQASPARSVAEELPSNSKPSG | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 2153627 | 2158313 | - | BLOR14561 | Blo14g00243 | 69756 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo14g00243 | 474 | MobiDBLite | consensus disorder prediction | 90 | 112 | - | - | |
| Blo14g00243 | 474 | Pfam | E2F/DP family winged-helix DNA-binding domain | 145 | 208 | IPR003316 | GO:0005667|GO:0006355 | |
| Blo14g00243 | 474 | Coils | Coil | 159 | 179 | - | - | |
| Blo14g00243 | 474 | Gene3D | - | 217 | 325 | - | - | |
| Blo14g00243 | 474 | PANTHER | TRANSCRIPTION FACTOR E2F | 19 | 459 | IPR015633 | GO:0000978|GO:0006357 | |
| Blo14g00243 | 474 | Gene3D | - | 137 | 210 | IPR036388 | - | |
| Blo14g00243 | 474 | PANTHER | TRANSCRIPTION FACTOR E2FB | 19 | 459 | - | - | |
| Blo14g00243 | 474 | SUPERFAMILY | Winged helix DNA-binding domain | 143 | 206 | IPR036390 | - | |
| Blo14g00243 | 474 | Pfam | E2F transcription factor CC-MB domain | 224 | 324 | IPR032198 | GO:0046983 | |
| Blo14g00243 | 474 | CDD | E2F_DD | 223 | 325 | IPR032198 | GO:0046983 | |
| Blo14g00243 | 474 | SUPERFAMILY | E2F-DP heterodimerization region | 220 | 325 | IPR037241 | - | |
| Blo14g00243 | 474 | SMART | E2F_TDP_2 | 143 | 208 | IPR003316 | GO:0005667|GO:0006355 | |
| Blo14g00243 | 474 | MobiDBLite | consensus disorder prediction | 454 | 474 | - | - | |
| Blo14g00243 | 474 | Coils | Coil | 228 | 255 | - | - | |
| Blo14g00243 | 474 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo08g00058 | Blo14g00243 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo04g00746 | Blo-Chr4:7053527 | Blo14g00243 | Blo-Chr14:2153627 | 1.27E-11 | dispersed | |
| Blo14g00243 | Blo-Chr14:2153627 | Blo16g00208 | Blo-Chr16:4669150 | 4.13E-12 | dispersed | |
| Blo12g00527 | Blo-Chr12:23213746 | Blo14g00243 | Blo-Chr14:2153627 | 1.50E-141 | transposed | |
| Blo14g00243 | Blo-Chr14:2153627 | Blo08g00058 | Blo-Chr8:472288 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 13239 | PF16421 | E2F_CC-MB | 8.40E-33 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo14g00243 | K06620 | - | csv:101219318 | 688.337 |