Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00284 ATGAGCAAAGGCAGGGGAATGGGTGTTGCAGAGCTTCCTTCGAGTAGACTGCAAATTAGGGCGGGTCTTTCGAATTGGTGGGCAGTTTTTCTGAATCACCGGTTTAATGAATACCCGAACCAGGATACAGTTGCAGGAGGTGGTGCAGCCTCTTGGAAGAATCCAAAGATAATGCGGCCTAAGCCTGAAAATGTAAATGGACTAGAACCTCCTCAACATTCCGTTCATCCAATTAGCAGTTTTACTGAGCCGTGGTGGCGTAATATGGGGTATAATCCTATCTCTGCCCCAATGCCGATGATGGGGAAAAACGCTTCTAATCCAAACTCATTGGAGTGCGCAGATGGTGTTTCAGAGTCCAATGATGATCAATTGATGTCAGATGATCTGGATGAAGAAGATGATGGTGTCTCCAGTGAAACACATACTATTGCATCACCATCATCTGCTGCTAATTTAAGCCAAGAGCAACAAAATCATCAGCATGTCGCTCCCACCATGCCCACCATGCACAATGAACCTATCACACAACCTAGGCAACTCGAACTTATCGGTCACTCTATGACTTGTTGTGCAGCAAATCCATATCAGGATTCATGTATGGGAGGAATTATGGCTACTTATGGGCACCAGCCTTTGTTTTATCCTCCTTTTCCCGGAATGCCACATGGTAGAATGCCTTTGCCTCATGAGATGGCTCAAGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGCATTATAAGGCGAAGACAAGCACGCGCTAAGGCTGAGGTTGAAAAGAAGCTGGTAAAAGTCAGAAAGCCCTACCTTCATGAATCTCGCCACCAGCATGCAATGAGAAGGCCAAGAGGAAGCGGAGGGCGTTTTGCTAAGAAAGACAAAATGGATACTTTAAACTTCCCTGCCGAAGAAAGGGGTACAACCTCTTGTCCTCCCCCTCCCACTCCCCCTCTTCACCCTCTGCTAGTCCATCTGGCTCTGGACCCACGCTATTTACTTCTTACTCACTAA 1014 46.55 MSKGRGMGVAELPSSRLQIRAGLSNWWAVFLNHRFNEYPNQDTVAGGGAASWKNPKIMRPKPENVNGLEPPQHSVHPISSFTEPWWRNMGYNPISAPMPMMGKNASNPNSLECADGVSESNDDQLMSDDLDEEDDGVSSETHTIASPSSAANLSQEQQNHQHVAPTMPTMHNEPITQPRQLELIGHSMTCCAANPYQDSCMGGIMATYGHQPLFYPPFPGMPHGRMPLPHEMAQEPVFVNAKQYQGIIRRRQARAKAEVEKKLVKVRKPYLHESRHQHAMRRPRGSGGRFAKKDKMDTLNFPAEERGTTSCPPPPTPPLHPLLVHLALDPRYLLLTH 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2845175 2849376 + BLOR14602 Blo14g00284 69797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00284 337 MobiDBLite consensus disorder prediction 101 172 - -
Blo14g00284 337 ProSiteProfiles NF-YA/HAP2 family profile. 233 293 IPR001289 GO:0003700|GO:0006355
Blo14g00284 337 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 90 297 IPR001289 GO:0003700|GO:0006355
Blo14g00284 337 MobiDBLite consensus disorder prediction 273 293 - -
Blo14g00284 337 SMART cbf3 232 293 IPR001289 GO:0003700|GO:0006355
Blo14g00284 337 MobiDBLite consensus disorder prediction 140 172 - -
Blo14g00284 337 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 235 290 IPR001289 GO:0003700|GO:0006355
Blo14g00284 337 MobiDBLite consensus disorder prediction 122 136 - -
Blo14g00284 337 MobiDBLite consensus disorder prediction 102 121 - -
Blo14g00284 337 ProSitePatterns NF-YA/HAP2 subunit signature. 238 258 IPR018362 GO:0003677|GO:0016602
Blo14g00284 337 Gene3D - 233 294 - -
Blo14g00284 337 PRINTS CCAAT-binding transcription factor subunit B signature 267 290 IPR001289 GO:0003700|GO:0006355
Blo14g00284 337 PRINTS CCAAT-binding transcription factor subunit B signature 236 258 IPR001289 GO:0003700|GO:0006355
Blo14g00284 337 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 90 297 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01379 Blo14g00284 CCT
Blo03g00980 Blo14g00284 CCT
Blo03g01379 Blo14g00284 ECH
Blo03g00980 Blo14g00284 ECH
Blo08g00103 Blo14g00284 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00980 Blo-Chr3:35958672 Blo14g00284 Blo-Chr14:2845175 3.38E-77 dispersed
Blo08g00259 Blo-Chr8:3301451 Blo14g00284 Blo-Chr14:2845175 2.00E-32 dispersed
Blo14g00284 Blo-Chr14:2845175 Blo14g00448 Blo-Chr14:5297558 4.36E-30 dispersed
Blo09g00463 Blo-Chr9:15774004 Blo14g00284 Blo-Chr14:2845175 1.67E-19 transposed
Blo14g00284 Blo-Chr14:2845175 Blo03g01379 Blo-Chr3:40225072 4.34E-87 wgd
Blo14g00284 Blo-Chr14:2845175 Blo08g00103 Blo-Chr8:1083191 7.04E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13243 PF02045 CBFB_NFYA 7.00E-27 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00284 K08064 - jre:109019615 309.686