Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo14g00284 | ATGAGCAAAGGCAGGGGAATGGGTGTTGCAGAGCTTCCTTCGAGTAGACTGCAAATTAGGGCGGGTCTTTCGAATTGGTGGGCAGTTTTTCTGAATCACCGGTTTAATGAATACCCGAACCAGGATACAGTTGCAGGAGGTGGTGCAGCCTCTTGGAAGAATCCAAAGATAATGCGGCCTAAGCCTGAAAATGTAAATGGACTAGAACCTCCTCAACATTCCGTTCATCCAATTAGCAGTTTTACTGAGCCGTGGTGGCGTAATATGGGGTATAATCCTATCTCTGCCCCAATGCCGATGATGGGGAAAAACGCTTCTAATCCAAACTCATTGGAGTGCGCAGATGGTGTTTCAGAGTCCAATGATGATCAATTGATGTCAGATGATCTGGATGAAGAAGATGATGGTGTCTCCAGTGAAACACATACTATTGCATCACCATCATCTGCTGCTAATTTAAGCCAAGAGCAACAAAATCATCAGCATGTCGCTCCCACCATGCCCACCATGCACAATGAACCTATCACACAACCTAGGCAACTCGAACTTATCGGTCACTCTATGACTTGTTGTGCAGCAAATCCATATCAGGATTCATGTATGGGAGGAATTATGGCTACTTATGGGCACCAGCCTTTGTTTTATCCTCCTTTTCCCGGAATGCCACATGGTAGAATGCCTTTGCCTCATGAGATGGCTCAAGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGCATTATAAGGCGAAGACAAGCACGCGCTAAGGCTGAGGTTGAAAAGAAGCTGGTAAAAGTCAGAAAGCCCTACCTTCATGAATCTCGCCACCAGCATGCAATGAGAAGGCCAAGAGGAAGCGGAGGGCGTTTTGCTAAGAAAGACAAAATGGATACTTTAAACTTCCCTGCCGAAGAAAGGGGTACAACCTCTTGTCCTCCCCCTCCCACTCCCCCTCTTCACCCTCTGCTAGTCCATCTGGCTCTGGACCCACGCTATTTACTTCTTACTCACTAA | 1014 | 46.55 | MSKGRGMGVAELPSSRLQIRAGLSNWWAVFLNHRFNEYPNQDTVAGGGAASWKNPKIMRPKPENVNGLEPPQHSVHPISSFTEPWWRNMGYNPISAPMPMMGKNASNPNSLECADGVSESNDDQLMSDDLDEEDDGVSSETHTIASPSSAANLSQEQQNHQHVAPTMPTMHNEPITQPRQLELIGHSMTCCAANPYQDSCMGGIMATYGHQPLFYPPFPGMPHGRMPLPHEMAQEPVFVNAKQYQGIIRRRQARAKAEVEKKLVKVRKPYLHESRHQHAMRRPRGSGGRFAKKDKMDTLNFPAEERGTTSCPPPPTPPLHPLLVHLALDPRYLLLTH | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2845175 | 2849376 | + | BLOR14602 | Blo14g00284 | 69797 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo14g00284 | 337 | MobiDBLite | consensus disorder prediction | 101 | 172 | - | - | |
Blo14g00284 | 337 | ProSiteProfiles | NF-YA/HAP2 family profile. | 233 | 293 | IPR001289 | GO:0003700|GO:0006355 | |
Blo14g00284 | 337 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 90 | 297 | IPR001289 | GO:0003700|GO:0006355 | |
Blo14g00284 | 337 | MobiDBLite | consensus disorder prediction | 273 | 293 | - | - | |
Blo14g00284 | 337 | SMART | cbf3 | 232 | 293 | IPR001289 | GO:0003700|GO:0006355 | |
Blo14g00284 | 337 | MobiDBLite | consensus disorder prediction | 140 | 172 | - | - | |
Blo14g00284 | 337 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 235 | 290 | IPR001289 | GO:0003700|GO:0006355 | |
Blo14g00284 | 337 | MobiDBLite | consensus disorder prediction | 122 | 136 | - | - | |
Blo14g00284 | 337 | MobiDBLite | consensus disorder prediction | 102 | 121 | - | - | |
Blo14g00284 | 337 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 238 | 258 | IPR018362 | GO:0003677|GO:0016602 | |
Blo14g00284 | 337 | Gene3D | - | 233 | 294 | - | - | |
Blo14g00284 | 337 | PRINTS | CCAAT-binding transcription factor subunit B signature | 267 | 290 | IPR001289 | GO:0003700|GO:0006355 | |
Blo14g00284 | 337 | PRINTS | CCAAT-binding transcription factor subunit B signature | 236 | 258 | IPR001289 | GO:0003700|GO:0006355 | |
Blo14g00284 | 337 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 | 90 | 297 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo03g01379 | Blo14g00284 | CCT | |
Blo03g00980 | Blo14g00284 | CCT | |
Blo03g01379 | Blo14g00284 | ECH | |
Blo03g00980 | Blo14g00284 | ECH | |
Blo08g00103 | Blo14g00284 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00980 | Blo-Chr3:35958672 | Blo14g00284 | Blo-Chr14:2845175 | 3.38E-77 | dispersed | |
Blo08g00259 | Blo-Chr8:3301451 | Blo14g00284 | Blo-Chr14:2845175 | 2.00E-32 | dispersed | |
Blo14g00284 | Blo-Chr14:2845175 | Blo14g00448 | Blo-Chr14:5297558 | 4.36E-30 | dispersed | |
Blo09g00463 | Blo-Chr9:15774004 | Blo14g00284 | Blo-Chr14:2845175 | 1.67E-19 | transposed | |
Blo14g00284 | Blo-Chr14:2845175 | Blo03g01379 | Blo-Chr3:40225072 | 4.34E-87 | wgd | |
Blo14g00284 | Blo-Chr14:2845175 | Blo08g00103 | Blo-Chr8:1083191 | 7.04E-125 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13243 | PF02045 | CBFB_NFYA | 7.00E-27 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo14g00284 | K08064 | - | jre:109019615 | 309.686 |