Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00302 ATGGGACAGAAAAAGACGATATGCTCTGCGCTCGCTTTAACTTCGATTTTGCTTTCGATCACGGAGGTCGTCGTTTCGATGACGACGACTATCCCATCAGACAAATCGGCGGTAGAAAGTTGGTTTTCCAGCAACGTGAAACCGTACAAAGAGCGAAAGTCGGAAATCTATCCTGAGCTGTGGGCGGCGGAAGCCGGAGCAAAAGTGGTGCGGGTGAGGAAAGACGGGACAGGAGATTTCAGAACGATCACCGCCGCGATCAACAGCATTCCGTCGGGGAATAAGCATCGAGTGATTATTTCGATCGGAGGTGGAGTTTACACTGAGAAAATTAAGATTGATCGAACAAAACCCTTCATTACTTTTTATGGATCTCCACATAACATGCCCAACTTGACATATTCCGGCACCGCTGCTAAATACGGCACCGTCGACAGCGCTTCTGTGATCGTCGAGTCTGACTACTTCGTGGCTGCAAATATCGTCTTCAAGAATTCTGCTCCGCGGCCAGACGGGAAGAGACCAGGAGCACAGGCGGTAGCATTGAGGATCTCCGGCGATAAAGCAGCGTTCTATAACTGCAAACTGATCGGATTTCAAGATACCCTCTGCGATGATAGAGGCAGGCATTTCTTCAAAAACTGTCTCATCGTCGGAACTGTAGATTTCATATTTGGAAGCGGCAGATCTCTCTACCTGAATACAAATCTATACGTAGACGTGAAGAACGAAGGATTCACGATAATCACAGCCCATGCAAGGGAACAAGAAGGCGAAAATACTGGGTATTCTTTCGTCCATGGGAGGGTAGACGGAAGTGGAAAGAACAACACCTTCTTAGGACGAGCATGGAAATCACGGCCAAAAGTCGTCTTCTCCTACACAGAGATGTCTCCCGTTGTCAACTCCGTCGGCTGGAGCATCAACTTCCATCCTCAACATGCAAAGACGGTGTATTTTGGAGAATACCAGTGCAGAGGATTAGGCGCCAAGTCTGAACGCAGAGCCGGATTCGCCAAGAAGATGACCAGCGGTGAAGTCAAACCCTTCGTCACTTTGGATTACGTGCAGGCTTCCAGTTGGCTGCTTCCACCCCCTCATCTCTAA 1107 48.87 MGQKKTICSALALTSILLSITEVVVSMTTTIPSDKSAVESWFSSNVKPYKERKSEIYPELWAAEAGAKVVRVRKDGTGDFRTITAAINSIPSGNKHRVIISIGGGVYTEKIKIDRTKPFITFYGSPHNMPNLTYSGTAAKYGTVDSASVIVESDYFVAANIVFKNSAPRPDGKRPGAQAVALRISGDKAAFYNCKLIGFQDTLCDDRGRHFFKNCLIVGTVDFIFGSGRSLYLNTNLYVDVKNEGFTIITAHAREQEGENTGYSFVHGRVDGSGKNNTFLGRAWKSRPKVVFSYTEMSPVVNSVGWSINFHPQHAKTVYFGEYQCRGLGAKSERRAGFAKKMTSGEVKPFVTLDYVQASSWLLPPPHL 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3099242 3100594 + BLOR14620 Blo14g00302 69815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00302 368 Pfam Pectinesterase 70 357 IPR000070 GO:0030599|GO:0042545
Blo14g00302 368 PANTHER PECTINESTERASE 63-RELATED 35 363 - -
Blo14g00302 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 363 - -
Blo14g00302 368 Gene3D - 65 364 IPR012334 -
Blo14g00302 368 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Blo14g00302 368 SUPERFAMILY Pectin lyase-like 65 362 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00302 Blo-Chr14:3099242 Blo14g00522 Blo-Chr14:7391923 1.93E-69 dispersed
Blo14g00302 Blo-Chr14:3099242 Blo08g00137 Blo-Chr8:1448089 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00302 K01051 - tcc:18605246 465.692