Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00306 ATGGCTGATCAGCTCACTCACGGCCAGATTTCCGAGTTCAAGGGGGCCTTCAGCCTCTTCGACAAGGACGGCGATGGCTATATTACCACCAAGGAACTTGGAACTGCAATGCGAACTTTGGGCCAGAACCCAACAGAAGCAGAGCTGCAAGACATGATCAATGAAGCGGACGCTAATGGAAATGGAACCATCGAATTCCCAGAGTTCGTTAAACTTATGGCCAGGAAAATGAAGGACACAGGTTCAGAGGAGGAGCTGAAGGAAGCTTTTCGTGTCTTTGACAAGGACCAGAACGGCTTCATTTCTCCAGCTGAGCTCCGCCATGTGATGATGAATCTTGGTGAGAAGCTGGCAGATGGAGAAGTTGATGAGATGATTTCCGAAGCTGATGTAGATGGTGACCGGCAGATCAACTACGAAGAATTTGTCAGAATCATGATGGCCAACTGTTGGGTTGGATTCTACAGTTTCGCCGACATCAAGTATGATATAAAGTTGTCGGTAAAAGTTCAAGACCCTGAATCTGTTGTTCAAGAAGTTCTTACGAGCATCAGCAATGCCACCATTAGCAGAAGAAACCTGGGTTATCTCTCGTGTGGTACGGGAAACCCTATTGACGACTGCTGGAGGTGCGACCCCAAGTGGGAGACTAACCGGCAGCGCCTTGCAGACTGCGCCATCGGGTTTGGCAAGCAGGCCATCGGCGGCCGAGACGGGAAAATTTACGTCGTTACAGATCCGACTGACAAGGACGTGGTGAATCCTAAACCGGGCACTCTACGTCACGCCGTCATCCAAGACGAACCCCTTTGGATCATCTTCAGCCGGGATATGGTCATCAAGCTAAAAGAAGAGCTCATCATGAACTCCTTCAAGACAATCGATGGCCGCGGAGTCAGCGTCCACATCGCCGGTGGGCCTTGCATTACTATTCAGTACGTGACCAACGTCATAATTCACGGAGTCAACATTCACGATTGCAAGGCCGGAGGAAACGCCTACGTGAGAGACTCGCCGGACCATTACGGGTGGCGGACGAGGTCGGACGGAGACGGGGTTTCGATCTTCGGAGGAAGCCATATTTGGGTGGACCATTGCACTCTGTCAAACTGCAATGATGGTCTGATAGACGCCATTCATGGATCTACAGCCATTACCATATCCAACAATTACATGACTCACCATAACAAAGTCATGCTGTTGGGCCACAGCGATTCCTACACACCAGACAAGAACATGCAAGTCACCATAGCTTTCAACCATTTCGGAGAAGAACTAGTCCAGAGAATGCCCAGGTGTAGGCATGGGTATTTTCATGTGGTGAATAATGACTATACGCATTGGGAAATGTACGCGCTTGGAGGTAGTGCGGCTCCGACAATCAACAGCCAAGGCAACAGATTTCTAGCGCCGAACGACTCTGACAACAAAGAGGTGACGAAGCACGAGGACGCAGCAGAGAAAGAATGGAGAAAGTGGAATTGGAGGTCGGAGGGAGATTTGATGCTAAACGGAGCGTTTTTCACGAGATCTGGAGCAGGCGCATCCTCCAGCTACGCTAAGGCGTCGAGTCTGAGCGCAAGGCCGTCGTCGCTTGTCAGTTCACTCACCGGTGGCGCCGGAGCTCTTAGATGCAAGAAGGGTTCTCGCTGCTGA 1656 50.79 MADQLTHGQISEFKGAFSLFDKDGDGYITTKELGTAMRTLGQNPTEAELQDMINEADANGNGTIEFPEFVKLMARKMKDTGSEEELKEAFRVFDKDQNGFISPAELRHVMMNLGEKLADGEVDEMISEADVDGDRQINYEEFVRIMMANCWVGFYSFADIKYDIKLSVKVQDPESVVQEVLTSISNATISRRNLGYLSCGTGNPIDDCWRCDPKWETNRQRLADCAIGFGKQAIGGRDGKIYVVTDPTDKDVVNPKPGTLRHAVIQDEPLWIIFSRDMVIKLKEELIMNSFKTIDGRGVSVHIAGGPCITIQYVTNVIIHGVNIHDCKAGGNAYVRDSPDHYGWRTRSDGDGVSIFGGSHIWVDHCTLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDSYTPDKNMQVTIAFNHFGEELVQRMPRCRHGYFHVVNNDYTHWEMYALGGSAAPTINSQGNRFLAPNDSDNKEVTKHEDAAEKEWRKWNWRSEGDLMLNGAFFTRSGAGASSSYAKASSLSARPSSLVSSLTGGAGALRCKKGSRC 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3136127 3142191 - BLOR14624 Blo14g00306 69819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00306 551 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Blo14g00306 551 ProSitePatterns EF-hand calcium-binding domain. 21 33 IPR018247 -
Blo14g00306 551 SUPERFAMILY EF-hand 2 148 IPR011992 -
Blo14g00306 551 CDD EFh 12 74 IPR002048 GO:0005509
Blo14g00306 551 ProSitePatterns EF-hand calcium-binding domain. 94 106 IPR018247 -
Blo14g00306 551 Gene3D - 202 544 IPR012334 -
Blo14g00306 551 Gene3D - 75 123 - -
Blo14g00306 551 PANTHER PECTATE LYASE 18-RELATED 165 548 IPR045032 GO:0030570
Blo14g00306 551 Gene3D - 2 74 - -
Blo14g00306 551 Pfam EF-hand domain pair 83 146 IPR002048 GO:0005509
Blo14g00306 551 Pfam EF-hand domain pair 13 73 IPR002048 GO:0005509
Blo14g00306 551 Pfam Pectate lyase 288 468 IPR002022 -
Blo14g00306 551 ProSiteProfiles EF-hand calcium-binding domain profile. 8 43 IPR002048 GO:0005509
Blo14g00306 551 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Blo14g00306 551 SMART efh_1 85 113 IPR002048 GO:0005509
Blo14g00306 551 SMART efh_1 121 149 IPR002048 GO:0005509
Blo14g00306 551 SMART efh_1 48 76 IPR002048 GO:0005509
Blo14g00306 551 SMART efh_1 12 40 IPR002048 GO:0005509
Blo14g00306 551 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Blo14g00306 551 PANTHER PECTATE LYASE 165 548 - -
Blo14g00306 551 SMART amb_all 277 474 IPR002022 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 493 517 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 225 242 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 285 301 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 349 370 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 451 470 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 249 274 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 429 448 IPR018082 -
Blo14g00306 551 PRINTS Pollen allergen Amb family signature 522 545 IPR018082 -
Blo14g00306 551 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Blo14g00306 551 SUPERFAMILY Pectin lyase-like 191 545 IPR011050 -
Blo14g00306 551 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Blo14g00306 551 Gene3D - 124 192 - -
Blo14g00306 551 CDD EFh 85 147 IPR002048 GO:0005509
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo08g00141 Blo14g00306 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00712 Blo-Chr4:6558464 Blo14g00306 Blo-Chr14:3136127 0 dispersed
Blo09g00340 Blo-Chr9:13823518 Blo14g00306 Blo-Chr14:3136127 6.11E-13 dispersed
Blo10g00424 Blo-Chr10:7553723 Blo14g00306 Blo-Chr14:3136127 0 dispersed
Blo12g00572 Blo-Chr12:23968254 Blo14g00306 Blo-Chr14:3136127 5.67E-07 dispersed
Blo12g00644 Blo-Chr12:24791886 Blo14g00306 Blo-Chr14:3136127 5.97E-11 dispersed
Blo14g00306 Blo-Chr14:3136127 Blo16g00243 Blo-Chr16:5643367 0 dispersed
Blo16g01131 Blo-Chr16:39837804 Blo14g00306 Blo-Chr14:3136127 1.69E-166 dispersed
Blo14g00306 Blo-Chr14:3136127 Blo14g00307 Blo-Chr14:3143618 0 tandem
Blo14g00306 Blo-Chr14:3136127 Blo08g00141 Blo-Chr8:1477647 6.94E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00306 K01728 - tcc:18609637 697.967