Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00307 ATGGACGATCCGTTCATCCGAAACTATATTGAAGACCTGCTGAAGAATGTTAGAACTCAAGTTCTGCTTAAGCTTATCAAGCCTTACACCAGAATCCGGATACCATTCATATCACAGGAGCTTAACGTGCCAGAAAAAGACGTAGAGCAGTTGCTGGTTTCTCTTATATTGGACAACCGGATCGATGGGCATATCGATCAGGTGAACCGGCTTCTAGAGCGTGGAGACAGAACTGGAGGAACTGCTGTTCAATCCGGAATTAGCGGTTTGGTCTCAGTTCTCCCAATTCTAGGAACCGTCTGTCCGTTCCGCTCCAAAACTAGACCAAATCGGACCGTGACCACGCGAAGCCACATGTCTCGGGTTGGCTTCTACGTATCGCCCGATCTTATCGGACACGAAGACGAAGCTAACAATTCAATAAGAGAGTACACGCTGTATTTCCACCAACTTGGAACTACAATGCGATCTTTGAACCAGAACCCAACAGAAGCAGAGCTGCAAGACATGATCAATGAAGTGGACGCTCATAGAGATGGAACCTTCGGACTGTTCCATGATCTTATGGTCAAGAAAATGAAGGACGCAAGTTCAGTGGAGGAGCTGAAGGAAGCTTTTCGTGTCTTTGACAAGGACCAGAATGGCTTCATTTCTGCAGCTGAGCTCCGCCATGTGATGAGGAGACTTGGTGAGAAGCTGGAAGATGAAGAAGTTGATGAGATGATTTCCGAAGCTGATGAGCTTCGGTACCGAGCCGTTTTCGATTCCGACGAGCGAACCGACGCGGTTTTGCTCGGTTCAGTGGTGATTGAATTGAAGGATTCCGGAGAGGCAACCTCTTGCGACGGCAGCTCCGAATTCGAGCATATGTCCGATTCCGGCGAAAACAGAACACTCGGTTCTGTTTTGTTCTGTTGGGCTTGGATGATTTCAGCAAGCGTGATACGATTCTTGCGTAATTGGTTGCTCCGGTCGGTAAGGCAGACCGTCATCGAGAGTCACAATAACTCTACCCTTTCTACATTGGATATTCCTTTTGTTCAAGAGAGCATCAGCAATGCCACCATTGGCAGAAGAAACCTGGGTTATCTCTCGTGTGGTACGGGAAACCCCATTGACGACTACTGGAGGTGCGACGCTAAGTGGGAGACTAACCGGCAGCGCCTGGCAGACTGCGCCATCGGGTTTGGCAAGCAGGCCATCGGCGGCCGAGACGGGAAAATTTACGCCGTTACAGATCCGACTGACAAAGACGTTGTGAATCCTAAACCGGGCACTCTACGTCACGCCGTTATCCAAGACGAACCCCTTTGGATTATCTTCAGCCGGGATATGGTCATCAAGCTAAAGGAAGAGCTCATCATGAACTCCTTCAAAACAATCGACGGACGCGGCGTCAGCGTCCACATCACAGGCGGACCTTGCATTACGATTCAGTACGTGACCAACATCATAATTCACGGAGTCAACATTCATGATTGCAAGGCCGGAGGAAACGCCTACGTGAGAGACTCGCCGGATCATTACGGGTGGCGGACGAGGTCGGACGGAGATGGGGTTTCGATCTTCGGAGGAAGCCATATTTGGGTGGACCATTGCACTCTGTCAAACTGCAATGATGGTCTGATAGACGCCATTCATGGATCTACAGCCATTACCATATCCAACAATTATATGACTCACCATAACAAAGTAATGCTGTTGGGCCACAGCGATTCCTACACACCAGACAAGAACATGCAAGTCACCATAGCTTTCAACCATTTCGGAGAAGGACTAGTCCAGAGAATGCCCAGGTAG 1800 49.28 MDDPFIRNYIEDLLKNVRTQVLLKLIKPYTRIRIPFISQELNVPEKDVEQLLVSLILDNRIDGHIDQVNRLLERGDRTGGTAVQSGISGLVSVLPILGTVCPFRSKTRPNRTVTTRSHMSRVGFYVSPDLIGHEDEANNSIREYTLYFHQLGTTMRSLNQNPTEAELQDMINEVDAHRDGTFGLFHDLMVKKMKDASSVEELKEAFRVFDKDQNGFISAAELRHVMRRLGEKLEDEEVDEMISEADELRYRAVFDSDERTDAVLLGSVVIELKDSGEATSCDGSSEFEHMSDSGENRTLGSVLFCWAWMISASVIRFLRNWLLRSVRQTVIESHNNSTLSTLDIPFVQESISNATIGRRNLGYLSCGTGNPIDDYWRCDAKWETNRQRLADCAIGFGKQAIGGRDGKIYAVTDPTDKDVVNPKPGTLRHAVIQDEPLWIIFSRDMVIKLKEELIMNSFKTIDGRGVSVHITGGPCITIQYVTNIIIHGVNIHDCKAGGNAYVRDSPDHYGWRTRSDGDGVSIFGGSHIWVDHCTLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDSYTPDKNMQVTIAFNHFGEGLVQRMPR 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3143618 3159506 - BLOR14625 Blo14g00307 69820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00307 599 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 8 90 - -
Blo14g00307 599 CDD EFh 201 246 IPR002048 GO:0005509
Blo14g00307 599 SMART amb_all 444 599 IPR002022 -
Blo14g00307 599 SMART PINT_4 8 90 IPR000717 -
Blo14g00307 599 Coils Coil 219 239 - -
Blo14g00307 599 Gene3D - 369 599 IPR012334 -
Blo14g00307 599 Pfam EF-hand domain pair 200 246 IPR002048 GO:0005509
Blo14g00307 599 Gene3D - 1 92 - -
Blo14g00307 599 SUPERFAMILY EF-hand 146 246 IPR011992 -
Blo14g00307 599 ProSiteProfiles PCI domain profile. 1 79 IPR000717 -
Blo14g00307 599 Gene3D - 144 191 - -
Blo14g00307 599 SUPERFAMILY Winged helix DNA-binding domain 2 77 IPR036390 -
Blo14g00307 599 Gene3D - 192 242 - -
Blo14g00307 599 PRINTS Pollen allergen Amb family signature 416 441 IPR018082 -
Blo14g00307 599 PRINTS Pollen allergen Amb family signature 596 599 IPR018082 -
Blo14g00307 599 PRINTS Pollen allergen Amb family signature 392 409 IPR018082 -
Blo14g00307 599 PRINTS Pollen allergen Amb family signature 516 537 IPR018082 -
Blo14g00307 599 PRINTS Pollen allergen Amb family signature 452 468 IPR018082 -
Blo14g00307 599 ProSitePatterns EF-hand calcium-binding domain. 210 222 IPR018247 -
Blo14g00307 599 SUPERFAMILY Pectin lyase-like 359 599 IPR011050 -
Blo14g00307 599 PANTHER PECTATE LYASE 346 599 - -
Blo14g00307 599 PANTHER PECTATE LYASE 18-RELATED 346 599 IPR045032 GO:0030570
Blo14g00307 599 Pfam PCI domain 2 73 IPR000717 -
Blo14g00307 599 ProSiteProfiles EF-hand calcium-binding domain profile. 197 232 IPR002048 GO:0005509
Blo14g00307 599 Pfam Pectate lyase 455 598 IPR002022 -
Blo14g00307 599 SMART efh_1 166 192 IPR002048 GO:0005509
Blo14g00307 599 SMART efh_1 201 229 IPR002048 GO:0005509
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00538 Blo-Chr5:10682745 Blo14g00307 Blo-Chr14:3143618 3.25E-40 dispersed
Blo08g00141 Blo-Chr8:1477647 Blo14g00307 Blo-Chr14:3143618 0 dispersed
Blo14g00307 Blo-Chr14:3143618 Blo16g00243 Blo-Chr16:5643367 3.57E-157 dispersed
Blo14g00306 Blo-Chr14:3136127 Blo14g00307 Blo-Chr14:3143618 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00307 K01728 - tcc:18609637 483.026