Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00340 ATGGATCAAGTTCCAGTAGACAAGCGTAGGAAGATCGGAGTGGGAAGAATGGGTGGACCTCCAGCTACTGGTCGTACGAGACAGGTTTTTTCTGTGGTTAGTAATAGGCAAGACTTAGCGGTTGGAAGTGATGCTGGAATTAGTGAGGGATCAGAAGGCGGTAATGTTGTGTTCACCAAGGAAGAGGTCGATGCATTACTAAATGAGAAGTTTAAAGGAAAGCAGTTTGATCTCAAGGGGAAACTTGAGCAAGTCACTGAACATAGCAAAAGGCTCAAGGTCTGCATCAAGTGGTTTCAACAAGCCAACGAAAGCCATCACCTTGAGGAGGAAAAGTTACGAAATGCTTTAGAGTCTGCTGAGAAAAAATGCACTGAAACAGAGTTGGAGATGAGAAAGAGAATACAAGAGTTCACTTCCGGTATTTCGGAAATGCAGAAAACTATTGGTTCTATGGAAGAGAAAATCGCAAAAGAGGAATCAGATAAGTTGGTTGTACTCGAATGCCATAGAAGAGAGAAAGAAGCTAGACTTGGAGCTGAAAAGTTGCAAGGTTCTCTCTCAGAGGAGCTCGAGAAGAGTCGACAAGAAAAATGTGCTTTAGAAAAGCGGGTTGCATCAAATGAAGATTTGTATAAGCGAGCTCAAGAGTACAACATCAGCTTGCAACAATACAATAGTAAACTTCAAGCTGACCTTGATACAACAAACGAGTCATTGAAAAGGGTTGAAATGGAAAAACAGACCATTGTAGAGAATCTTAGCAATTTAAGGGGTCACAATAAAATGTTGCAGGACCAATTATCTTCTTTAAAAGCTTCACAAGATGAGGCGTTAAAGCAGAAAGAGGCATCAATAAAAGAACTCAGATGCGTCCAAGGGGAAGTACAACATCTGAGAAATGATCGAGACCGTCTAATGACACAGGCAACATGTGCTTCTCAAAGGCAACAAATACGGTTGTTGGAGCAGCAATTAGCCTCTGCAAATGAGAAAATAAAACTAGTTGATTTATCTGCTTCAGAATTAAAATCAGCATATGAAGAGCAAAAGAGCGTAGTTCGTGAATTACAAAACCGAATTGCAGATTTTGAGTATCAACTTGTTGAGGGGGAAAAGTTGAGGAAAAAGCTTCACAATACCATTTTGGAGTTGAAAGGAAATATTCGTGTATTCTGCCGAGTGCGCCCTTTGTTACCTGATGATGAATCTGGATCAGAAAGCACAATCATTTCTTATCCAACATCAATGGAAACTCTAGGCCGGGGGATTGATTTAATGCAAAATGGTAGACAAAAATATCCTTTCACATTTGACCAAGTATTTACACATGAAGCTTCCCAGCAGGATGTTTTTGTTGAAATCGCACAGCTGGTGCAGAGTGCACTTGATGGTTACAAGGTGTGCATATTTGCATATGGACAAACTGGAGCAGGTAAAACTTACACTATGATGGGTAATCCAACAGGTCAACAGCAAAAGGGGTTGATTCCACGATCGTTGGAACAAATATTTCAAACTAGTCAATTACTTGAAGCTCAAGGTTGGAAATATCAAATGCAGGCGTCGATGTTAGAGATTTACAATGAGACCATTCGCGATTTATTGTCACCAAACAGACTGAGTGGGGAAGTAAGGACAGAAGTTGGTGTTCCTGGGAAGCAATACACCATTAAACATGATGCAAATGGAAACACTTATGTTTCAGATCTCACGATTGTTGATGTATGTAGCATTCGGGAGGTTTCATCTCTCTTACAACAGGCTGCAACCAGCAGGTCTGTGGGCAAGACTCAAATGAACGAGCAGTCCTCGAGGAGTCATTTTGTATTTACGTTGCGGATATCAGGAGTAAATGAGAGTACAGAGCAACAAGTGCAAGGAGTACTAAACCTCATCGACCTTGCAGGAAGTGAGCGACTCTCCAAAAGTGGGTCAACAGGGGACAGATTAAAGGAAACACAGGCAATAAACAGAAGTCTGTCATCGCTGAGTGATGTAATATTTGCGTTGGCCAAGAAGGAGGATCATATACCATACCGAAACTCAAAGCTTACCTATCTTCTCCAGCCATGTCTAGGAGGAGATTCAAAAAGCTTAATGATTGTTAACATTTCACCCGATCCATTGTCGGCCGGTGAGTCGCTTTGCTCCCTTCGATTTGCAGCAAGAGTGAACGCTTGTGAAATCGGAATACCTCGGCGGCAGACGTCCGTGCGCCCTTGA 2226 41.96 MDQVPVDKRRKIGVGRMGGPPATGRTRQVFSVVSNRQDLAVGSDAGISEGSEGGNVVFTKEEVDALLNEKFKGKQFDLKGKLEQVTEHSKRLKVCIKWFQQANESHHLEEEKLRNALESAEKKCTETELEMRKRIQEFTSGISEMQKTIGSMEEKIAKEESDKLVVLECHRREKEARLGAEKLQGSLSEELEKSRQEKCALEKRVASNEDLYKRAQEYNISLQQYNSKLQADLDTTNESLKRVEMEKQTIVENLSNLRGHNKMLQDQLSSLKASQDEALKQKEASIKELRCVQGEVQHLRNDRDRLMTQATCASQRQQIRLLEQQLASANEKIKLVDLSASELKSAYEEQKSVVRELQNRIADFEYQLVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDESGSESTIISYPTSMETLGRGIDLMQNGRQKYPFTFDQVFTHEASQQDVFVEIAQLVQSALDGYKVCIFAYGQTGAGKTYTMMGNPTGQQQKGLIPRSLEQIFQTSQLLEAQGWKYQMQASMLEIYNETIRDLLSPNRLSGEVRTEVGVPGKQYTIKHDANGNTYVSDLTIVDVCSIREVSSLLQQAATSRSVGKTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINRSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGGDSKSLMIVNISPDPLSAGESLCSLRFAARVNACEIGIPRRQTSVRP 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3639275 3645521 - BLOR14658 Blo14g00340 69853

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00340 741 SMART kinesin_4 386 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 MobiDBLite consensus disorder prediction 1 25 - -
Blo14g00340 741 Pfam Kinesin motor domain 394 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 ProSitePatterns Kinesin motor domain signature. 628 639 IPR019821 GO:0003777|GO:0005524|GO:0007018
Blo14g00340 741 Coils Coil 142 162 - -
Blo14g00340 741 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 PRINTS Kinesin heavy chain signature 629 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 PRINTS Kinesin heavy chain signature 598 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 PRINTS Kinesin heavy chain signature 678 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 Coils Coil 208 246 - -
Blo14g00340 741 ProSiteProfiles Kinesin motor domain profile. 388 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo14g00340 741 Gene3D Kinesin motor domain 329 730 IPR036961 -
Blo14g00340 741 PANTHER KINESIN-LIKE PROTEIN KLP-3 309 740 - -
Blo14g00340 741 PANTHER KINESIN-LIKE PROTEIN KLP-3 11 309 - -
Blo14g00340 741 Coils Coil 289 309 - -
Blo14g00340 741 Coils Coil 103 137 - -
Blo14g00340 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 726 IPR027417 -
Blo14g00340 741 Coils Coil 261 281 - -
Blo14g00340 741 Coils Coil 312 374 - -
Blo14g00340 741 PANTHER KINESIN-LIKE PROTEIN 309 740 - -
Blo14g00340 741 PANTHER KINESIN-LIKE PROTEIN 11 309 - -
Blo14g00340 741 CDD KISc_C_terminal 386 730 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00340 K10405 KIFC1; kinesin family member C1 - jre:109011553 1097.42
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00340 Blo-Chr14:3639275 Blo10g00686 Blo-Chr10:21978939 1.03E-84 dispersed
Blo03g00584 Blo-Chr3:22901936 Blo14g00340 Blo-Chr14:3639275 0 transposed
Blo14g00340 Blo-Chr14:3639275 Blo08g00166 Blo-Chr8:1909684 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g6 . . . . . . . . Cmo10g01101 . Cma10g01045 . . . . . Cpe18g00084 . . . . . . . . . . . . . . . . . . . . . . . Blo14g00340 . . Bpe08g00334 . Bma07g00328 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006216 1 1 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 1 0 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo14g00340 Blo_Chr14 FPKM 8.011455 3.779873 2.532176 2.49364 6.855176 5.987987 6.528238 0.0 0.0 0.0