Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00365 ATGAATGATCTCTTCTCCGGTTCGTTCAAAAAGTATGCAGACCTGAAGCAGCAGGCCCACCTAGACGGCATGGAGGCCGGAAAGGAGAGCGTAAATCTTGACAAGTTCTTCGACGACATCGACAATGTGAAGGAAGACATGAAACAAGTGGAAAAGCTCTACAAGAAACTGCAGGAAGCAAATGAGGAATGCAAAGTCGTCCACAATGCCAAAACCATGAAAGAACTGAGAGCAAGAATGGATCAAGACGCCAGCCAGGTTTTAAAAAGAGTCAAAATGATCAAAGCAAAGCTGGAAGCCCTCGAACGATCAAATGCAGCCCATCGTAGCCTTCCAGGGTGTGGCCCAGGCTCATCTGCCGACAGAACAAGAACCTCGGTCGTAAGTGGATTGGGGAAGAAACTAAAAGACATAATGGATGATTTTCAGAGCTTAAGAAGTAGAATGAATGCAGAATATAAGGAAACAGTTGAACGCAGGTATTTCACAATCACAGGAGAGAAGGCAGATGAAGAAACCATTGAAAATCTTATCTCAAGTGGAGAAAGCGAAAATTTTCTGCAGAAAGCAATTCAAGAACAGGGCAGAGGCCAAATAATGGACACCATATCTGAAATACAAGAAAGACACGATGCAGTGAAGGAGATCGAGAAGAACCTCCTTGAGCTTCACCAGATATTTCTGGACATGGCTGCTCTGGTCGAGGCTCAGGGGCATCAGCTCAATGACATAGAGAGTCACGTTGCCCATGCAAATTCGTTCGTCCGGCGAGGGACGGAGCAGCTTCAAGAGGCCAGAGAAAGTCAGAAGAGCTCGAGGAAATGGACCTGCATTGCCGTAGTTCTTGGTGCAGTTCTTGTTGCTGTTCTTCTCTTCCCACTTCTAACCTCCATTTTGCCTCACCTGTTGTAG 912 46.16 MNDLFSGSFKKYADLKQQAHLDGMEAGKESVNLDKFFDDIDNVKEDMKQVEKLYKKLQEANEECKVVHNAKTMKELRARMDQDASQVLKRVKMIKAKLEALERSNAAHRSLPGCGPGSSADRTRTSVVSGLGKKLKDIMDDFQSLRSRMNAEYKETVERRYFTITGEKADEETIENLISSGESENFLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQIFLDMAALVEAQGHQLNDIESHVAHANSFVRRGTEQLQEARESQKSSRKWTCIAVVLGAVLVAVLLFPLLTSILPHLL 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3972538 3973449 + BLOR14683 Blo14g00365 69878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00365 303 CDD SNARE_syntaxin1-like 202 264 - -
Blo14g00365 303 PANTHER SYNTAXIN-124-RELATED 6 294 - -
Blo14g00365 303 Coils Coil 84 104 - -
Blo14g00365 303 CDD SynN 33 190 IPR006011 GO:0016020
Blo14g00365 303 Gene3D - 193 296 - -
Blo14g00365 303 SMART tSNARE_6 198 265 IPR000727 -
Blo14g00365 303 Pfam SNARE domain 240 291 IPR000727 -
Blo14g00365 303 PANTHER SYNTAXIN 6 294 IPR045242 -
Blo14g00365 303 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Blo14g00365 303 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Blo14g00365 303 Coils Coil 33 70 - -
Blo14g00365 303 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Blo14g00365 303 SMART SynN_4 28 154 IPR006011 GO:0016020
Blo14g00365 303 Gene3D - 33 160 - -
Blo14g00365 303 Pfam Syntaxin 35 238 IPR006011 GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00464 Blo-Chr9:15786007 Blo14g00365 Blo-Chr14:3972538 4.30E-124 dispersed
Blo12g00540 Blo-Chr12:23357511 Blo14g00365 Blo-Chr14:3972538 2.83E-114 dispersed
Blo14g00365 Blo-Chr14:3972538 Blo15g00503 Blo-Chr15:8565426 8.42E-75 dispersed
Blo14g00365 Blo-Chr14:3972538 Blo08g00183 Blo-Chr8:2085505 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00365 K08486 - csv:101217140 526.554