Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00448 ATGTATTATGATTTGCCTCCTGAATTTCATCCTTTTGCTCTAAAGCATTTTGTGAATGACGGTTCAAACAATGCATCTTTGTCAGGCTATAATTCTGCTGATAGAAGTGTTACCAAACTATCAAGTTTAAGCTTTCCTGACTCTTTTTTATTAAAACATAATAGTGAAACTGATGACCAGCAAAAACTCTCTGAATCTGAGAACCGGTCTTCATCTCCTCTGACTGGACTGTCTCATCATGGTATTTCAAATCCAACTCAGTATACAATGCCGTCGCAACTTGGAGTGGGACATGCAATGGCACCACCGGCTTATCCATATCCTGATCCTTACTACAGAAGCATCTTTGCTCCGTATGATGGACAACCATATCCTCCTCGGCCTTATGGTGTTCAACCTATGGTTCATCTCCAGTTAATGGGAATTCAGCAAGCTGGAGTGCCTTTGCCATCAGATGCAGTGGAGGAGCCTGTCTTTGTAAATGCCAAACAGTATCACGGCATCATGAGGAGGCGTCAATCTCGTGCAAAAGCTGAATCAGAGAATAAAGCTTTGAAGTCTAGGAAGCCATATTTGCACGAATCCCGTCATTTACATGCATTGAGAAGAGCTAGAGGATGTGGTGGTAGGTTTCTCAAGGCGAAGAAAAATGAAAACCAATCAAATGAGGCGATGTCAGGCGATGAATTACAAACCAACTTGAACCTCAACAACAATAAAAATGATCCTGCTTCCTCAGATAGTGCGTCCTAA 753 41.97 MYYDLPPEFHPFALKHFVNDGSNNASLSGYNSADRSVTKLSSLSFPDSFLLKHNSETDDQQKLSESENRSSSPLTGLSHHGISNPTQYTMPSQLGVGHAMAPPAYPYPDPYYRSIFAPYDGQPYPPRPYGVQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNAKQYHGIMRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKAKKNENQSNEAMSGDELQTNLNLNNNKNDPASSDSAS 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5297558 5300755 + BLOR14766 Blo14g00448 69961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00448 250 ProSiteProfiles NF-YA/HAP2 family profile. 154 214 IPR001289 GO:0003700|GO:0006355
Blo14g00448 250 MobiDBLite consensus disorder prediction 211 250 - -
Blo14g00448 250 MobiDBLite consensus disorder prediction 56 90 - -
Blo14g00448 250 MobiDBLite consensus disorder prediction 172 191 - -
Blo14g00448 250 PRINTS CCAAT-binding transcription factor subunit B signature 157 179 IPR001289 GO:0003700|GO:0006355
Blo14g00448 250 PRINTS CCAAT-binding transcription factor subunit B signature 188 211 IPR001289 GO:0003700|GO:0006355
Blo14g00448 250 MobiDBLite consensus disorder prediction 172 194 - -
Blo14g00448 250 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 156 211 IPR001289 GO:0003700|GO:0006355
Blo14g00448 250 MobiDBLite consensus disorder prediction 66 90 - -
Blo14g00448 250 SMART cbf3 153 214 IPR001289 GO:0003700|GO:0006355
Blo14g00448 250 ProSitePatterns NF-YA/HAP2 subunit signature. 159 179 IPR018362 GO:0003677|GO:0016602
Blo14g00448 250 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 52 234 IPR001289 GO:0003700|GO:0006355
Blo14g00448 250 MobiDBLite consensus disorder prediction 218 250 - -
Blo14g00448 250 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-7 52 234 - -
Blo14g00448 250 Gene3D - 154 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00463 Blo-Chr9:15774004 Blo14g00448 Blo-Chr14:5297558 3.92E-19 dispersed
Blo14g00284 Blo-Chr14:2845175 Blo14g00448 Blo-Chr14:5297558 4.36E-30 dispersed
Blo14g00448 Blo-Chr14:5297558 Blo16g00972 Blo-Chr16:37967267 8.77E-21 dispersed
Blo14g00448 Blo-Chr14:5297558 Blo08g00259 Blo-Chr8:3301451 4.47E-119 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13260 PF02045 CBFB_NFYA 4.70E-26 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00448 K08064 - jre:109011209 310.842