Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00478 ATGTCCGGTCATGCGGGAGACGACAAACAGCGCGGAGCTAGGGCATGGATCGGCGAATTTGTGGCTCCCACGGGTTGCAGTTTCCGGCGACGGTTGAGGGATGGTGATCGGCGATGGCTGGAACGGCTAGATAGGGCTTCGGTTCGCGTTGGGCAGCTTCACTGGTCCGGTTTTCTTGCAGTTCGGTTCATCCGATCTATTTCAGTGGTTCTTATCTGGCGATTTGGAAGGAAGCTGTGTGGCAGAGGCGTGGAGACCAATCCGAAAAATCTGCCTCTGTTGCCGAGTGCTCTAGTGATTGGATGTTGGGTGCTTTCTAGAACGGGTGTTGGAGCTGCTGGAGCCGGAGAGCTGTCCGTGTATGGTTTTCTTCAAAGGGTAAGACTTGGGTGTGTTTTGGCCAGGTGGAGGCCCTACATCGCAAGTGTGTGTGTGAGCAACTATTATTCATTGGGATTCATGGAAACGCCAAAGCATGAAGACAAAGAAGTTCAGTGCCATGTTCTCATGTGGAGCCCTAGAAACCCTAATCGGCTAGATCCGTTTTGTTTCAGCTTGGAGGAGTTTTCAGGAGTCAAGGCTCACAAGTGTAGGTACATGTACGCGTGGAGTTTCTCGAGCAAGGAAGAAGTAGTTGATGATGGATTTGCACGCGCGAGCTGCTACTTGCTTGATAGGCCTCGCATTAAACCGATTACAGAAGACCCAACATGTGAGAAGAATCGCTATGTGATATTATCTGAAACAGTTCAAAATCCAGATTTGTGTGATATTCCTGGCCAGAAAATTGATGAACTGAAGGCCATTTGCGAGATTGAAGTAGTTCCATATTTGTTGACACTTGGATATTCATATTGGGGCGCAGATCATGTATTGAAACATATTCTGCCTGCTGGATTGGAGGTCCCTTCATCGTTTGAGACCATAGTTAAGTACTTAGCCATTGTGACTACTGTTTTTCCAGACATTTATTACACCTGTCACGTTGCTCATCTGAATATACACGATGAATTACTTCCATATAAGGATGTTATCGCAAAGAAAAATTATCCAAGAATCAAAAGTGTTGTTAATAAAGTTGGAACAATTGCCAACGAATTCCGTGTGCCAAAATTTGAAGTTTTAGCTGGAGAAAATAATATGGTCACTGAAGTTAAGCAATACGGGGCTACATTCAAGCTGGACTACGGTTTAGTATATTGGAACTCAAGATTAGAGCATGAGCACATACGGTTAGTTTCACAGTTCCAAGCAGGGGAAACAATTTGTGACATGTTTGCTGGTATTGGTCCTTTTGCAATTCCAGCAGCACAAAAAGGATGCATTGTGTATGCAAATGACTTAAATCCAGATAGTATTCATTATCTGAAAATTAACTCAGAAATCAACAAGGTCAATGATTATATTCATGCCTACAATGTGGATGCAAGAAAGTTTATTGCTGAAATCTTGGCGGTACCAGAAGATACCTTTAATTTAGGATCTGCTTCAACTGTGCTAAAGGCTTGTGATCAATCTATTGTTCAGTCCAATCAAAAATCAATGGAAAACGAAGATGAGAGGTTCACGGTTCAGGGGAAAGAAGTCCAAGCTAGGGAAGCAAGCAATTTAGGGTCCGCTCAATTTTCAGATAGGAATAAAGATGCAGTTACACCAGTGGTTAAAAGATCTTCAGATAGCTGTCAAGAAGGAAGTGGTTGCAGTGAAGATGGTGCCCCTTCTGTGACTGCTAGGCAAAAAGGAAGCAGAAATAAAAGGATAAAAAACTCCAACGTAGGCCGTACTTGTCCCTGGGAGCATATTGATCATGTGATAATGAACTTACCTGCTTCTGCCCTGGAATTTCTAGATGCATTTAGAGGGTTAATCCAGAGGAGATGTTGGAAGGGCGATCTTCCTCTGATTCATTGCTATTGTTTCATCCGGGCAAATGAGGTGCAAGAATTGATAATATCTAAGGCTGAGTCTGCCTTGGGTGGCCGTATGGTCGACCCAACATTTCATAGAGTTAGAGATGTAGCTCCAAATAAGCGGGCGTTCGAAGTTGAATCACGCAACGGTCATATTCTACGCGGGACCCACACTCTCTTCTTTACTACGCGCTGTTACCCATCTTCAGTCTCAGACGCCAACGCCGAGCACGCAGAGGGGTGGGTAGCTATGGCTTCTCTAACTGCCGGAATTCTTCTCAAACTACTCCAGTCAATGAATTCTGCCACCCGCGTTACTGGGGACCACCGTTCGGCTCTTCTCCAAGTCGTCGGCATTGTTCCTGCTTTCGCAGGCTCCGATCTCTGGCCTAATCACGGTTTCTACGTTCAACTCTCTGATTCTCTCAACTCCACCTACGTGTCTCTCTCAGATCGTGATAATGATCTCATCCTCACCAACCGTCTGCAGCTCGGCCAGTTTGTCTATGTTGATCGGTTTGAGTTTGATTCTCCAGTTCCACGTCTTTGTGGGATTCGACCAATAGCAGGTCGTCATCCGTTTGTGGGAAATCCGGATCCACTGGTTGCGAGGATTTCTGCATCGAAAAGAGAGTTTGTGATTCAACCGATGTCTGAATCTGATCAATCTGTGGATCCAATTTCGACGTATTTATCAGGGAAGAAATTTGAGCCTCCTACTTGCGAAACTAAAGATTCTAAGGTTGAAAAGGTTAGGGTTAGACAGGCGCTTGCTCCTCGAGATAATCTGCCAATGGGAAATTCGGAGAATTATGAGGTAGGAAAGTTTTGTGAGAAGCCTTCGCGATTTTCCTCCCCTGCAGGAGTTAAGAGATCTGCATCGGCGGGAAAGAAAAATATGGCTGTTGCGGAGAGAGATCCTTCGCCAGCGGGGAAGGGAAAGAGGTCGGCTTCTCCGGTGCCTTCCAAATGTGTGGTTCCAAGTTTGGTTGCAGCTCGAGAAGAGAATCGTAGGTCTTCAAGGGAAGCAGCCATTGTAGTGCCATCTAGGTATCGGCAGCCATCCCCAAATTCGAGGAAGCAGGCGTCACCTTGTGCAAGAAGAGGTTCACTTTCTCCTGGGCGAAGGCTGTCTGTAGGTCTAAAGGTCTCCCCCATGTTGGCTGGAGCTAGTGATTCAGCTACGAAGAAAAAGATGACAAATATAGTAGCAGGAATTTCCAAGGTCTCTGAAGCTGTAGCTGGATCTGCAAAGTCTATAAGAAAGAGTTGGGATGAGGAACCAATAGCTGTAACTTCAGGGGAGCAAAAACAGAAGACTTGTTCAAAAAATAAAACTAATGTCGAAGCTATTTTACGGACTCAGGCTGCCATTTCACGACGACTAAGTGATGTAAATGGTCGAAGACCAAGTATTGATGGTTCTTCAGCACAAGAGAAATCAAAATCTGGAATACCTGAAACTTGTGTATTTTCAGACGAACCAAACTTAGCAGCTCTTGGTATTACTGTTCACAACAAGAAATGGACTGATGGCAGTGTTTCACTCGATGCAGTCTCCGCAGATCTTGCTAAGCTTGGCAAGGAGGCTATGCTAAGGAGATCGTTGGCTTCGGCAGCTGCAGCTGAAGCGTTGGAAGAAGCTGTAGCTACCGATTCCATTATAAGGAAATTAAGCATGTTTTCAGACCTTGCATCTGCATCCAAGACCGGAAATCCTTTACCCGCAATTGATCAATTTTTCGCCATTTACGATGACATAAGTTCCGCAATCAACGGTCAGGATTTCCAGTCGGAGCAATCCAAATCGGCCTCTCTCTGGGTTGAGGCTGCTTTGTCCACCAATCTGGAGATAGTCTCACTCATCTCAACTCAGAGCACAGAGCCCATATCATCTCCGGCGAAATCCACGTCAAAAAGACAACCTAATTCTCTTCCGGCACCCAATTCCAATGCAATGAAATGGGCAAAGAGTCACGGGAGGAAAGAAACATTAGAGCTAGCCATGAACTTGCAGTCTGAAATGAAAATGTGGTTTCTACGTTTTGTCGAGGACTCCATTGATGCCGGCTTCAAGGTGTTTGGAGAGTCCCAATCCAAGGCGATACCACTCGATCGAGGCACCATTGCCGCAATCTTATCCCAGTTGAAGCGGGTGAATGATTGGTTGGATGGGATAGTGTCTAAAGGAGATGATCAATTTGCAGAAAAGATTGAGAAATTGAAAAGGAAGATTTATGGGTTTGTGATTCAACATGTTGGGACAACTCTTTCATCGTCTTGA 4194 45.33 MSGHAGDDKQRGARAWIGEFVAPTGCSFRRRLRDGDRRWLERLDRASVRVGQLHWSGFLAVRFIRSISVVLIWRFGRKLCGRGVETNPKNLPLLPSALVIGCWVLSRTGVGAAGAGELSVYGFLQRVRLGCVLARWRPYIASVCVSNYYSLGFMETPKHEDKEVQCHVLMWSPRNPNRLDPFCFSLEEFSGVKAHKCRYMYAWSFSSKEEVVDDGFARASCYLLDRPRIKPITEDPTCEKNRYVILSETVQNPDLCDIPGQKIDELKAICEIEVVPYLLTLGYSYWGADHVLKHILPAGLEVPSSFETIVKYLAIVTTVFPDIYYTCHVAHLNIHDELLPYKDVIAKKNYPRIKSVVNKVGTIANEFRVPKFEVLAGENNMVTEVKQYGATFKLDYGLVYWNSRLEHEHIRLVSQFQAGETICDMFAGIGPFAIPAAQKGCIVYANDLNPDSIHYLKINSEINKVNDYIHAYNVDARKFIAEILAVPEDTFNLGSASTVLKACDQSIVQSNQKSMENEDERFTVQGKEVQAREASNLGSAQFSDRNKDAVTPVVKRSSDSCQEGSGCSEDGAPSVTARQKGSRNKRIKNSNVGRTCPWEHIDHVIMNLPASALEFLDAFRGLIQRRCWKGDLPLIHCYCFIRANEVQELIISKAESALGGRMVDPTFHRVRDVAPNKRAFEVESRNGHILRGTHTLFFTTRCYPSSVSDANAEHAEGWVAMASLTAGILLKLLQSMNSATRVTGDHRSALLQVVGIVPAFAGSDLWPNHGFYVQLSDSLNSTYVSLSDRDNDLILTNRLQLGQFVYVDRFEFDSPVPRLCGIRPIAGRHPFVGNPDPLVARISASKREFVIQPMSESDQSVDPISTYLSGKKFEPPTCETKDSKVEKVRVRQALAPRDNLPMGNSENYEVGKFCEKPSRFSSPAGVKRSASAGKKNMAVAERDPSPAGKGKRSASPVPSKCVVPSLVAAREENRRSSREAAIVVPSRYRQPSPNSRKQASPCARRGSLSPGRRLSVGLKVSPMLAGASDSATKKKMTNIVAGISKVSEAVAGSAKSIRKSWDEEPIAVTSGEQKQKTCSKNKTNVEAILRTQAAISRRLSDVNGRRPSIDGSSAQEKSKSGIPETCVFSDEPNLAALGITVHNKKWTDGSVSLDAVSADLAKLGKEAMLRRSLASAAAAEALEEAVATDSIIRKLSMFSDLASASKTGNPLPAIDQFFAIYDDISSAINGQDFQSEQSKSASLWVEAALSTNLEIVSLISTQSTEPISSPAKSTSKRQPNSLPAPNSNAMKWAKSHGRKETLELAMNLQSEMKMWFLRFVEDSIDAGFKVFGESQSKAIPLDRGTIAAILSQLKRVNDWLDGIVSKGDDQFAEKIEKLKRKIYGFVIQHVGTTLSSS 1397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6038760 6053491 - BLOR14796 Blo14g00478 69991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00478 1397 MobiDBLite consensus disorder prediction 1265 1290 - -
Blo14g00478 1397 PANTHER EXPRESSED PROTEIN 721 1396 - -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 1102 1123 - -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 546 589 - -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 1106 1122 - -
Blo14g00478 1397 Pfam Met-10+ like-protein 326 637 IPR030382 -
Blo14g00478 1397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 324 680 IPR029063 -
Blo14g00478 1397 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 320 688 IPR030382 -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 1265 1288 - -
Blo14g00478 1397 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 176 705 IPR025792 GO:0009019|GO:0030488
Blo14g00478 1397 CDD AdoMet_MTases 421 479 - -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 553 569 - -
Blo14g00478 1397 Gene3D Vaccinia Virus protein VP39 382 685 IPR029063 -
Blo14g00478 1397 Gene3D - 291 379 - -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 988 1002 - -
Blo14g00478 1397 PANTHER EXPRESSED PROTEIN 721 1396 IPR010341 -
Blo14g00478 1397 Pfam Plant protein of unknown function (DUF936) 724 1395 IPR010341 -
Blo14g00478 1397 MobiDBLite consensus disorder prediction 919 1013 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g00708 Blo14g00478 CCT
Blo14g00478 Blo16g00941 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo14g00478 Blo-Chr14:6038760 Blo07g00115 Blo-Chr7:1588834 1.48E-24 dispersed
Blo02g00733 Blo-Chr2:23455478 Blo14g00478 Blo-Chr14:6038760 6.88E-15 transposed
Blo03g01427 Blo-Chr3:40847662 Blo14g00478 Blo-Chr14:6038760 1.41E-07 transposed
Blo06g00324 Blo-Chr6:18540646 Blo14g00478 Blo-Chr14:6038760 2.90E-13 transposed
Blo14g00478 Blo-Chr14:6038760 Blo08g00275 Blo-Chr8:3614802 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00478 - - jre:108992700 889.026