Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00534 ATGGAGTCTCCGGTCTGTCCTCTCCCGGCTTTCGCGGTCGGCTACGAGTACGACCCCAATCCCGACGTCGGTGATTATTCTTCCCATTCTCTTCAACGGCCATGCATTGATCTCGACTATGTTGTGATGGAGAACGAAACCGATGCAGTTTTTGATATGGAGTTTTCCAACGGTTCTGTCGATTCTTTCTCCTCCGACCATTTTCGCATGTTCGAGTTCAAGGTGAAGAAATGCGCTCGTGGCAGCTCACATGATTGGACCCAGTGCCCGTACGCCCATCCAGGCGAGAAAGCCCGCCGGAGAGACTTGAGGAAGTATCAATACTCCGGTACTACATGCCCGGAGTTCCGGAAAGGAAATTGTAAGAGGGGTGATTTGTGCGAGTTCGCGCATGGCGTTTTCGAGAGCTGGCTCCACCCCGCTCGTTATCGAACGCAGCCATGCAAGGATGGGACGAGCTGTAGACGATTGGTCTGCTTCTTCGCTCACACTCCTCAGCAGCTCAGAGTACTGCCGGAGCTGAACTCCAGAAGATCCACAGATGGGTCTCCGGGAATTGAAGCTGGGTTTGTGAGTTCGTTTCCTTTTTTGGCTTCGCCGATCTCTGTTTCTCCTCTAGCGACTCCGATGGAGTCTCCACCACTGTCGCCGATGAGCCTTTCTCTAGGTTCAACGCCGATGAAAGAAATGACGTCATCTGTTCGGAGTCTGCAGCTTTGCAAGGTCAAGTCTTTACCTTCTTCGAGAAAAGTTCAAGTGGGGTCTCCTGTTTTCGGATCTCCGACCCGAAACGGGTACTTTAGTCTGCCTACTACCCCGACCCGGATTCGAACGTTTTCTGGAGTCAGACGCCTCGACTCCTGGGAAGAACATTTCGAAGAAGAGCCAGTGATGGAGCGGGTCGAATCGGGGAAAGATTTGAGAGCAAAAATGTACGAGAAGCTTAAAAAGGAAAATTCTCTGGATCGCATCGATCCATCCCCTTCATTGGACCCGGAACTCTAG 1005 51.94 MESPVCPLPAFAVGYEYDPNPDVGDYSSHSLQRPCIDLDYVVMENETDAVFDMEFSNGSVDSFSSDHFRMFEFKVKKCARGSSHDWTQCPYAHPGEKARRRDLRKYQYSGTTCPEFRKGNCKRGDLCEFAHGVFESWLHPARYRTQPCKDGTSCRRLVCFFAHTPQQLRVLPELNSRRSTDGSPGIEAGFVSSFPFLASPISVSPLATPMESPPLSPMSLSLGSTPMKEMTSSVRSLQLCKVKSLPSSRKVQVGSPVFGSPTRNGYFSLPTTPTRIRTFSGVRRLDSWEEHFEEEPVMERVESGKDLRAKMYEKLKKENSLDRIDPSPSLDPEL 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7801614 7802618 + BLOR05983 Blo14g00534 70047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00534 334 SMART c3hfinal6 107 133 IPR000571 GO:0046872
Blo14g00534 334 SMART c3hfinal6 142 165 IPR000571 GO:0046872
Blo14g00534 334 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 112 132 IPR000571 GO:0046872
Blo14g00534 334 ProSiteProfiles Zinc finger C3H1-type profile. 107 134 IPR000571 GO:0046872
Blo14g00534 334 Gene3D - 108 170 - -
Blo14g00534 334 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 27 329 - -
Blo14g00534 334 MobiDBLite consensus disorder prediction 315 334 - -
Blo14g00534 334 PANTHER UNKEMPT FAMILY MEMBER 27 329 IPR045234 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00857 Blo-Chr13:31160361 Blo14g00534 Blo-Chr14:7801614 2.43E-51 dispersed
Blo14g00534 Blo-Chr14:7801614 Blo15g00575 Blo-Chr15:11906893 5.28E-56 dispersed
Blo14g00534 Blo-Chr14:7801614 Blo02g00066 Blo-Chr2:452529 4.41E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13266 PF00642 zf-CCCH 2.60E-06 CL0537 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00534 - - jre:109010264 388.267