Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo14g00610 | ATGGCTTGGCCATTCTGTGTGTCCGTCGTTTTCGCGAAAGAGAGAGGGGGGAAGGGAGATGCGGGACGGGGACCGAGCGCCGGTGAGCTCGCGGGCGAACAGCGAACGGCGATCCGGCGAGCGACGAGCGCCGGCGAGGCTTCGATGTGCGATGACGGGCTCTCACGGTTAGGGCTTGCAAATTGGCGCTCGGGATCGGAGATTCTGGCAGTGACGCATTCCGGCATCGGTTCGAGCAGACATAGATGGACAGGAAGATATGAAGCTCATTTATGGGACAAGAATTGTTGGAATGAGTCTCAGAAGAAGAAAGGAAGACAAGGTGCCTATGATGATGAAAATGCCGCAGCACATGCCTATGACCTAGCAGCTCTCAAATATTGGGGCCCTGACACCATTCTTAACTTTCCGCTACCAACGTACCAAAAAGAACTAACAGAAATGGAAGGTCGATCACGAGAAGAGTATATTGGATCATTGAGAAGAAAAAGCAGTGGTTTTTCTCGCGGAGTTTCAAAATATCGAGGTGTTGCCAGACATCATCACAATGGAAGATGGGAAGCAAGGATCGGAAGAGTTTTTGGCAACAAATATCTCTACCTTGGGACATATGCAACCCAAGAAGAAGCGGCAACAGCATATGATCTGGCAGCAATAGAGTACCGAGGACTAAACGCTGTCACCAACTTTGACCTCAGTCGCTACATCAAATGGCTGAAACCAACCAATCACGATGCCAATACCAGCTGTGACTTTAGTCAGCAAAACCCTAATTCCCCTTCTCTTATGGGAATAGACCCAACTCAGAAACATGAACTAGGGTTTTTCCGAACTCAACAAGAACTGAGTCCAGTGGATCAGAGTTCAATCGCTCACACTCGACCTTCCTCTGCAACTTCAGCTCTAGGACTTCTTTTACAGTCCACAAAGTTTAAGGAAATGATGGAGATGAGTTACATTAACGACGGTTCTTTACCTGTGCCAGCCGCGGAGGTGGAGGCTGCGCCGCTCGTTTTTCCTCGAGACTTACAGATTCCTTTTGGCTTTGAAAAGTCTCTAAGCTTTGGAGAAGAAGATGACGTTATGTTCGGTGATCTTAATTCATTTATTTCACATAATTTTAATTATGACTTTGATAACTAG | 1143 | 47.51 | MAWPFCVSVVFAKERGGKGDAGRGPSAGELAGEQRTAIRRATSAGEASMCDDGLSRLGLANWRSGSEILAVTHSGIGSSRHRWTGRYEAHLWDKNCWNESQKKKGRQGAYDDENAAAHAYDLAALKYWGPDTILNFPLPTYQKELTEMEGRSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDLAAIEYRGLNAVTNFDLSRYIKWLKPTNHDANTSCDFSQQNPNSPSLMGIDPTQKHELGFFRTQQELSPVDQSSIAHTRPSSATSALGLLLQSTKFKEMMEMSYINDGSLPVPAAEVEAAPLVFPRDLQIPFGFEKSLSFGEEDDVMFGDLNSFISHNFNYDFDN | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 10677634 | 10684253 | + | BLOR06059 | Blo14g00610 | 70123 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo14g00610 | 380 | Pfam | AP2 domain | 79 | 129 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | Pfam | AP2 domain | 172 | 223 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | SUPERFAMILY | DNA-binding domain | 172 | 233 | IPR016177 | GO:0003677 | |
Blo14g00610 | 380 | PANTHER | AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 76 | 365 | - | - | |
Blo14g00610 | 380 | Gene3D | AP2/ERF domain | 172 | 233 | IPR036955 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | Gene3D | AP2/ERF domain | 74 | 138 | IPR036955 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | ProSiteProfiles | AP2/ERF domain profile. | 72 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | ProSiteProfiles | AP2/ERF domain profile. | 173 | 231 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | CDD | AP2 | 172 | 233 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | SUPERFAMILY | DNA-binding domain | 76 | 138 | IPR016177 | GO:0003677 | |
Blo14g00610 | 380 | SMART | rav1_2 | 80 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | SMART | rav1_2 | 173 | 237 | IPR001471 | GO:0003700|GO:0006355 | |
Blo14g00610 | 380 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 76 | 365 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo06g00638 | Blo-Chr6:29389774 | Blo14g00610 | Blo-Chr14:10677634 | 3.78E-123 | dispersed | |
Blo14g00610 | Blo-Chr14:10677634 | Blo17g00353 | Blo-Chr17:3726507 | 9.01E-98 | dispersed | |
Blo14g00610 | Blo-Chr14:10677634 | Blo01g00418 | Blo-Chr1:4714030 | 8.97E-06 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13270 | PF00847 | AP2 | 4.30E-12 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo14g00610 | K09285 | - | tcc:18589035 | 398.667 |