Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00771 ATGACGAGCTTCGTCGATGTTGTTGCACCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCAATATCGTTCTTGCGGTGAGTGTTCCATGCAACAATTTATTTGACATTGTAACAGTACGATGTGGACACTGCACCAATCTGTGGTCCGTGAACATGGCTGCAGCATTTCAGGCCCTGTCATGGCAAGATTTACAGCTCAACCTATACACTGCCCCAGACCAGCACCAGATTGATTCAGCATCCTCATCAATTTTTGCAAACAAGGTGGCAAAACGACCAGAAATTTCCAATCCCACCCCGGAAATGATTGTGACTCGAGCTCCTGAGAAGAGGCAACGAGTTCCTTCTGCATACAATCAGTTCATAAAAGAGGAAATACAAAGGATTAAGGCTAATAATCCAGATATTAGTCACAGGGAAGCATTCAGTACTGCTGCAAAAAATTGGGCGCACTTCCCGCGTATTCATTTCGGGCTGATGCTGGACACAAACAACCAACCAAAGCTGGATAATGTAAGAACTTTAGAGGTATGTAAAATCTAA 546 44.32 MTSFVDVVAPEQLCYIPCNFCNIVLAVSVPCNNLFDIVTVRCGHCTNLWSVNMAAAFQALSWQDLQLNLYTAPDQHQIDSASSSIFANKVAKRPEISNPTPEMIVTRAPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPRIHFGLMLDTNNQPKLDNVRTLEVCKI 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 23660301 23664860 - BLOR06220 Blo14g00771 70284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00771 181 PANTHER AXIAL REGULATOR YABBY 5 1 174 - -
Blo14g00771 181 SUPERFAMILY HMG-box 104 153 IPR036910 -
Blo14g00771 181 Gene3D High mobility group box domain 100 155 IPR036910 -
Blo14g00771 181 Pfam YABBY protein 9 160 IPR006780 GO:0007275
Blo14g00771 181 PANTHER PROTEIN YABBY 6-RELATED 1 174 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo11g00921 Blo-Chr11:19326401 Blo14g00771 Blo-Chr14:23660301 2.77E-39 dispersed
Blo12g00165 Blo-Chr12:10789311 Blo14g00771 Blo-Chr14:23660301 2.33E-53 dispersed
Blo14g00771 Blo-Chr14:23660301 Blo16g00898 Blo-Chr16:36804288 7.48E-81 dispersed
Blo14g00771 Blo-Chr14:23660301 Blo01g00625 Blo-Chr1:6967807 4.12E-93 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13278 PF04690 YABBY 6.90E-68 CL0114 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00771 K25796 - vvi:100254328 273.092