Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00843 GCAATGGCTGCTTCTACAATGGCTCTTTCTTCTCCTTCACTCGCCGGAAAGGCTGTGAAGCTTTCCCCATCCGCTTCCGAGCTTCTCGGAAATGGAAGAGTGAGCATGAGAAAAACTGGCGGAAAGCCTTCCTCCGGCAGCCCATGGTACGGTCCTGACAGAGTCAAGTATCTGGGTCCATTCTCCGGCTCTCCTCCCTCCTACCTCACCGGTGAATTCCCCGGAGACTATGGGTGGGACACCGCCGGACTTTCCGCTGACCCTGAGACCTTCGCCAAGAACCGAGAACTCGAAGTAATCCACTCCAGATGGGCCATGCTCGGCGCTCTCGGATGCGTCTTCCCGGAGCTCCTCTCCCGGAACGGAGTCAAGTTCGGCGAAGCAGTCTGGTTCAAAGCCGGATCCCAGATCTTCAGCGAGGGAGGGCTTGACTACTTGGGCAACCCAAGCTTGGTGCACGCTCAGAGCATCCTCGCAATATGGGCCTCTCAGGTCATCTTGATGGGCGCAGTCGAAGGTTACCGTATTGCCGGTGGACCACTAGGAGAGGTGACCGACCCGATCTACCCGGGTGGAAGCTTCGACCCACTGGGTCTCGCCGACGACCCAGAAGCTTTCGCAGAGCTGAAAGTGAAGGAGCTCAAAAACGGAAGGCTGGCTATGTTCTCTATGTTCGGGTTCTTCGTGCAAGCGATTGTCACCGGAAAAGGTCCGTTGGAGAACCTCGCCGACCACCTCGCCGACCCTGTTAACAACAACGCTTGGGCGTATGCCACCAACTTCGTCCCCGGGAAA 795 57.48 AMAASTMALSSPSLAGKAVKLSPSASELLGNGRVSMRKTGGKPSSGSPWYGPDRVKYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 30803394 30804188 + BLOR06292 Blo14g00843 70356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00843 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Blo14g00843 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 2 265 - -
Blo14g00843 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Blo14g00843 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Blo14g00843 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00138 Blo-Chr2:1181364 Blo14g00843 Blo-Chr14:30803394 9.50E-155 dispersed
Blo07g00489 Blo-Chr7:11342150 Blo14g00843 Blo-Chr14:30803394 0 dispersed
Blo07g00613 Blo-Chr7:18946899 Blo14g00843 Blo-Chr14:30803394 3.17E-155 dispersed
Blo09g00155 Blo-Chr9:4530814 Blo14g00843 Blo-Chr14:30803394 2.82E-166 dispersed
Blo11g00248 Blo-Chr11:1996201 Blo14g00843 Blo-Chr14:30803394 8.97E-25 dispersed
Blo14g00843 Blo-Chr14:30803394 Blo15g00451 Blo-Chr15:6642911 2.09E-154 dispersed
Blo14g00842 Blo-Chr14:30800478 Blo14g00843 Blo-Chr14:30803394 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00843 K08912 - cpap:110819729 519.235