Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00848 ATGCCTACCGTTAATGACGACGAACTGAGGCAGCTTGACGACATATCGCAGAGGCTTGATGACGATGAACCGCGAAAGCTTGATGACGACGAACTGCGGAGGCTTGATGACGACGAACGGCAGAGGCTTGATGACGACGAATGGAGACTTCCAAGGCAGCAACAACCGGCAACGTCCGTCAAAATTCCTGTTCACTCTGTTTCCGTTGACTTTCTTCTCTCTTTTCTGCCGAAACCGATTTACAGCTTCATCGTCTCTGGTTTCCGGTTTGCCAGAAGCATCGAAAGTCGTTCTCCCCGGTCCCAGATGGAGAGCGAGCCTCTTCTCCCATATGTAAGCGCAAGAAGAAAACCGCCGGCACTGCTGCCCCAACTCTGCCCCCTTCCTGAAAACGACGAGATTACTCTTCCCATAACTCCAACAGAACTAAAAGACCGGATTATCTTTGGTCATTCTTCTTCCCCACAGAACTCCTCCCCCATTGTTGAGGCTCTAACTCTCGCTTCTGCCAGAACCTCCTCCTCCTCTTCTTTCCAGGACCAGACGACCTCACTTGACCCTGAGTCTCAATCCCCACAAGCGTGGCCAATTGACCTCAACTGCCCATGGACCAAAACCAATCTCCACCGCTCCAAAACTGCCCCGGCCATGTCTACAATCAATGAAATTAACCGACTCAATGCGCCTAGGCCTCAATTTGGCGAACCAACAATTATTCGTCAGGCTTGTATTCTTCTCACTTTATACTTGTCATTGGGAATCATTATATATTGGTTCAATCGAAATAATTTTTCGGCAATCGAGACTCATCCTGTCGTTGATGCTCTCTACTTCTGCATTGTTACGATGTGCACAATCGGTTATGGAGATATTACTCCAAATAGTACTGCAACAAAGTTGTTTTCAGTACTTTTTGTGTTGGTGGGGTTTGGTTTTATGGATATTTTGCTCACCGGAATGGTGAGTTATGTGCTTGATTTGCAGGAGAGTTATTTACTGAAGAGTGTTAAGGGTGAGGGGGAAAAAGAGCCGGCGAGTTCGTTTTTAGTTGATGTGAAAAAGGGAAGAATGAGAATTAGAATGAAAGTTGGATTGGCATTGGGGGTTGTTGTTCTTTGTATTGGCATTGGTATGACGGTAATGCATTTCGTTGAGAGACTTGGATGGTTGGATTCGTTTTATCTTTCTGTCATGTCTGTTACGACCGTTGGATATGGTGACAGGGCCTTCAAATCTATGTCTGGTCGCATTTTCGCTTCGATTTGGTTGCTTGTGTCGACACTTGCGGTTGCTCGAGCTTTTCTTTATTTGGCGGAGGCCAGAGTTGATAAAAGGCATAGAAAGATGGCAAAGTGGATTCTTAGTCATGATATGACTGTGTCTGAATTTCTTGCAGCTGACATAGACAACAATGGCTTTGTCAGTAAATCAGAGTATGTGATATACAAGCTGAAGGAAATGGGGAAGGTAAGTGAGAAAGACGTGATGCAGATCTGCAATAAGTTTGACAGATTAGACGTTGGCAACTGTGGGAAGATAACTCTAGCTGATCTCATGGATGCCCATCCCCCATAG 1575 45.78 MPTVNDDELRQLDDISQRLDDDEPRKLDDDELRRLDDDERQRLDDDEWRLPRQQQPATSVKIPVHSVSVDFLLSFLPKPIYSFIVSGFRFARSIESRSPRSQMESEPLLPYVSARRKPPALLPQLCPLPENDEITLPITPTELKDRIIFGHSSSPQNSSPIVEALTLASARTSSSSSFQDQTTSLDPESQSPQAWPIDLNCPWTKTNLHRSKTAPAMSTINEINRLNAPRPQFGEPTIIRQACILLTLYLSLGIIIYWFNRNNFSAIETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSVLFVLVGFGFMDILLTGMVSYVLDLQESYLLKSVKGEGEKEPASSFLVDVKKGRMRIRMKVGLALGVVVLCIGIGMTVMHFVERLGWLDSFYLSVMSVTTVGYGDRAFKSMSGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWILSHDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDVMQICNKFDRLDVGNCGKITLADLMDAHPP 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31113968 31119203 - BLOR06297 Blo14g00848 70361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00848 524 Gene3D - 432 523 - -
Blo14g00848 524 Gene3D - 237 334 - -
Blo14g00848 524 SUPERFAMILY EF-hand 454 520 IPR011992 -
Blo14g00848 524 MobiDBLite consensus disorder prediction 7 38 - -
Blo14g00848 524 MobiDBLite consensus disorder prediction 1 38 - -
Blo14g00848 524 SUPERFAMILY Voltage-gated potassium channels 354 460 - -
Blo14g00848 524 SUPERFAMILY Voltage-gated potassium channels 238 324 - -
Blo14g00848 524 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Blo14g00848 524 PRINTS Two pore domain K+ channel signature 281 309 IPR003280 GO:0005267|GO:0016020|GO:0071805
Blo14g00848 524 PRINTS Two pore domain K+ channel signature 401 410 IPR003280 GO:0005267|GO:0016020|GO:0071805
Blo14g00848 524 Gene3D - 368 431 - -
Blo14g00848 524 PANTHER TWO-PORE POTASSIUM CHANNEL 3 186 518 - -
Blo14g00848 524 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 186 518 IPR003280 GO:0005267|GO:0016020|GO:0071805
Blo14g00848 524 Pfam Ion channel 244 324 IPR013099 -
Blo14g00848 524 Pfam Ion channel 369 438 IPR013099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00288 Blo-Chr13:14605979 Blo14g00848 Blo-Chr14:31113968 3.88E-92 dispersed
Blo14g00848 Blo-Chr14:31113968 Blo04g01255 Blo-Chr4:24926138 5.53E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00848 K05389 - csv:101220017 636.721