Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00857 ATGGGTAGGGGAAAGATCGAGATCAAACGGATCGAAAACACTACAAACCGTCAAGTCACGTTCTGCAAAAGGAGGAATGGATTGCTGAAGAAGGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTTGCCCTCATAGTCTTCTCCACCCGGGGTCGCCTCTACGAGTATGCAAATAACAGTGTTAAAGAAACAATTAGGAGGTATAAAAAGGTAAGTTGTAATTCACCAAACACTGGCTCAATTTCGGAAGCTAATGCTCAGTTTTACCAAGAAGAAGCTAATAAGCTCCGGACACTAATCGCAAACTTGCAGAATTCAAACAAGAAAATGATGGGGGAATCTGTGTGTTCTTTGCCTGCCAATGAGTGGAAAAAACTGGATGGTAAGTTAGAGAAAGCCATAAGCAAGATAAGATCCAAAAAGAATGAGCTCCTCTTTGAAGAGATTGAGTATATGCGCAAAAGGGAAATCGACTTACACAAGAATAATCAGCTTCTTCGAGCAAAGATAGCAGAGAGTGAGAGAAACCAGCAAAGCATGAACGTGATCGGAGGAAGCTTTGAACTAATGCAGTCTCAGCAATATGACGTGAGAAACTATTTTCCAGTGAATGCATCACAACCCACCAATCAGGAGTATCCACGTCAAGACCACATGTCCCTTCAATTGGTGTAA 678 42.18 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKETIRRYKKVSCNSPNTGSISEANAQFYQEEANKLRTLIANLQNSNKKMMGESVCSLPANEWKKLDGKLEKAISKIRSKKNELLFEEIEYMRKREIDLHKNNQLLRAKIAESERNQQSMNVIGGSFELMQSQQYDVRNYFPVNASQPTNQEYPRQDHMSLQLV 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31482245 31499007 - BLOR06306 Blo14g00857 70370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00857 225 ProSiteProfiles K-box domain profile. 87 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo14g00857 225 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 213 - -
Blo14g00857 225 SUPERFAMILY SRF-like 2 76 IPR036879 GO:0003677|GO:0046983
Blo14g00857 225 PANTHER FLORAL HOMEOTIC PROTEIN AGAMOUS-LIKE 1 213 - -
Blo14g00857 225 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Blo14g00857 225 Coils Coil 87 114 - -
Blo14g00857 225 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Blo14g00857 225 Pfam K-box region 85 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo14g00857 225 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Blo14g00857 225 Gene3D - 13 90 IPR036879 GO:0003677|GO:0046983
Blo14g00857 225 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Blo14g00857 225 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Blo14g00857 225 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Blo14g00857 225 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Blo14g00857 225 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00888 Blo-Chr1:17763511 Blo14g00857 Blo-Chr14:31482245 6.08E-81 dispersed
Blo04g00007 Blo-Chr4:75548 Blo14g00857 Blo-Chr14:31482245 4.87E-37 dispersed
Blo11g00002 Blo-Chr11:10151 Blo14g00857 Blo-Chr14:31482245 1.66E-41 dispersed
Blo14g00857 Blo-Chr14:31482245 Blo07g00016 Blo-Chr7:341868 2.99E-43 dispersed
Blo14g00857 Blo-Chr14:31482245 Blo14g00862 Blo-Chr14:31760301 9.64E-89 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13282 PF01486 K-box 3.80E-22 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00857 K09264 - qsu:112006550 339.732