Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo14g00862 ATGGATAGGGAGACAATAAACCTTTCAACCCTTCTTGTTCTTACTTTCTGTGGATTGGAAGTAAACCTTTTGGCTGTTTTGTTTCCAGATCGAAATCTAACCATGTCTAATTCACCTCAAAGAAAAATGGGTAGGGGAAAGATCGAGATCAAACGGATCGAAAACACTACAAACCGTCAAGTCACTTTCTGCAAAAGGAGGAACGGGTTGCTGAAGAAGGCTTATGAGCTTTCTGTTCTCTGTGATGCTGAGGTTGCCCTCATAGTCTTCTCCACCCGGGGTCGCCTCTACGAGTATGCAAATAACAGCGTGGATCGGGCAGCCAATCAGCAACTCGACGAAATTAAGGTATCAGTGCATTGGAAAACTGTTAAAGGAACAATTGAAAGATATAAAAAGGCAAGCTGTAATTTGCCAAACACCGGATTGATTTCAGAATCTAATGCTCAGTTTTACCAAGAAGAAGCTGATAAGCTACGGATGCTCATCTCAAAGTTGCAAAATTCAAACCAGAATATGATGGGGGAATCCGTGAGTTCTTTGCCTTTGAAGAAATTGAAAGATTTGGACAATAAGTTGGAGAAAGCAATTAGCAAGGTCAGATCCAAAAAGAATGAGCTCTTATTTGCAGAGATTGAGTACATGCGCAAAAGGAACGTTGGGGATTTCAGAACGGGTAAAGGTGAGCCCTAG 693 41.7 MDRETINLSTLLVLTFCGLEVNLLAVLFPDRNLTMSNSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVDRAANQQLDEIKVSVHWKTVKGTIERYKKASCNLPNTGLISESNAQFYQEEADKLRMLISKLQNSNQNMMGESVSSLPLKKLKDLDNKLEKAISKVRSKKNELLFAEIEYMRKRNVGDFRTGKGEP 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 31760301 31764898 + BLOR06311 Blo14g00862 70375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo14g00862 230 ProSiteProfiles K-box domain profile. 149 230 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo14g00862 230 ProSitePatterns MADS-box domain signature. 45 99 IPR002100 GO:0003677|GO:0046983
Blo14g00862 230 PANTHER FLORAL HOMEOTIC PROTEIN AGAMOUS-LIKE 43 219 - -
Blo14g00862 230 Coils Coil 183 213 - -
Blo14g00862 230 Pfam K-box region 146 218 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo14g00862 230 SUPERFAMILY SRF-like 44 123 IPR036879 GO:0003677|GO:0046983
Blo14g00862 230 PRINTS MADS domain signature 45 65 IPR002100 GO:0003677|GO:0046983
Blo14g00862 230 PRINTS MADS domain signature 80 101 IPR002100 GO:0003677|GO:0046983
Blo14g00862 230 PRINTS MADS domain signature 65 80 IPR002100 GO:0003677|GO:0046983
Blo14g00862 230 SMART madsneu2 43 102 IPR002100 GO:0003677|GO:0046983
Blo14g00862 230 PANTHER SERUM RESPONSE FACTOR HOMOLOG 43 219 - -
Blo14g00862 230 CDD MADS_MEF2_like 44 135 IPR033896 GO:0000977|GO:0045944
Blo14g00862 230 Coils Coil 149 169 - -
Blo14g00862 230 Gene3D - 55 137 IPR036879 GO:0003677|GO:0046983
Blo14g00862 230 ProSiteProfiles MADS-box domain profile. 43 103 IPR002100 GO:0003677|GO:0046983
Blo14g00862 230 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 52 99 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00050 Blo-Chr2:319832 Blo14g00862 Blo-Chr14:31760301 6.38E-64 dispersed
Blo14g00862 Blo-Chr14:31760301 Blo01g00140 Blo-Chr1:1906764 1.02E-39 dispersed
Blo14g00857 Blo-Chr14:31482245 Blo14g00862 Blo-Chr14:31760301 9.64E-89 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13283 PF01486 K-box 2.20E-19 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo14g00862 K09264 - csv:101221430 245.743