Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00020 ATGTCTGTCTCCGTAAATTTCACTTCTTCCCATTCAAATCTGAACTCTATCTCTACGCGCCTTGAAGTTCCTCGCCACGCTATTCGACCCTCTTCTTTATCGTTTCCTCATCCGCCGCTTTCTTTCTTCTCTTCCATCTCCTCATCCAATTATCGTAGATTTTTTCGCGGCAACGAGACATTCTCGAACCCTAATTCTTTTTTCCTTTTACCTAAATATGTTCGCTTCAATGCAATCAGGGCCGCTAGTAACGATTACTACTCTACGCTCAATCTCAACCGCGATGCGTCGCTGAAAGAAATTAAAAGTTCTTATAGGAAGCTTGCTCGTAAGTACCATCCAGATATGAACAAGGGACCTGGGGCAGAAGAGAAGTTCAAAGAGATTAGTGCTGCATACGAGGTCCTGTCTGATGATGAGAAAAGATCTTTATATGATAAATTTGGTGAGGCCGGTCTGCAAGGAGAATATGGGGGATCTAACAGTGGTTCACAAGGGGTGGATCCTTATGAAGTTTTTGATGCATTCTTTGGAGGAGATGGCCTTTTTGGAGCAAGAGGTGAAACTGGAGGCTTCAATATCAATATGAGTAATAAGGGATACCAGAATCTTGATATTAGGTATGACCTGCATCTGAGCTTTGAAGAATCAGTTTTTGGTGGAGAGAGGGAAGTTGCAATTTCTTACTTGGGGCCATGTGAAACTTGTGACGGAACAGGTGCAAAATCAAGTAGTTCCATTAAATCTTGTTCTAGTTGTGGTGGGAGAGGTGCTGCCATGAAAACTCAGAAAACGCCCTTTGGAATAATGTCCCAGGTAGTATCTACTTGCTCAGACTGTGGTGGTGATGGTAAAATAATCACGGAACGTTGTCGCAATTGTGGTGGCTCTGGCCAATTAAAATTAAAACGAAAAATGAACGTGGCTATCCCAGCCGGAGTTAATGATGGAGCCACGATGCAAATTCAACGAGAGGGAAGTTTTGACAAGAAAAGGGGGATAGTTGGTGACCTCTACATAGTGCTTCATGTTGAGGAGAAGAGTGGATTTCGGAGGGACGGTCTTAACTTATACTCAAAGATTGACATTGATTATATAGAAGCAATACTAGGGAGCGTGGTGAAGGTAGAGACTGTTGATGGCATGAAAGATTTACAAATCCCTCCCGGGATTCAGCCAGGGGATACAGTGAAATTGCCACGCATGGGTGTTCCAGACATAAATAAACCTTCTGTTCGCGGTGATCATCATTTCATTGTTAATGTTAAGATCCCAAAACAAATCAGTGACCCGGAACGTGCTCTTCTCGAAAACTTGGCTCTACACAAGGCATCTAATCGGGTTAAAGGAAACTTTAACAAACATGTAAATGAAGACCAAAAACACTTTCATGGAAGCCACAGAGAAGAACAGGCTTCTTCATGGTGGCATTCGATTAAGGGAGTATTTGGGTATATTCTTGACTCAATGTTCCTTTTCGATGTAGATATGCTTTAA 1497 42.42 MSVSVNFTSSHSNLNSISTRLEVPRHAIRPSSLSFPHPPLSFFSSISSSNYRRFFRGNETFSNPNSFFLLPKYVRFNAIRAASNDYYSTLNLNRDASLKEIKSSYRKLARKYHPDMNKGPGAEEKFKEISAAYEVLSDDEKRSLYDKFGEAGLQGEYGGSNSGSQGVDPYEVFDAFFGGDGLFGARGETGGFNINMSNKGYQNLDIRYDLHLSFEESVFGGEREVAISYLGPCETCDGTGAKSSSSIKSCSSCGGRGAAMKTQKTPFGIMSQVVSTCSDCGGDGKIITERCRNCGGSGQLKLKRKMNVAIPAGVNDGATMQIQREGSFDKKRGIVGDLYIVLHVEEKSGFRRDGLNLYSKIDIDYIEAILGSVVKVETVDGMKDLQIPPGIQPGDTVKLPRMGVPDINKPSVRGDHHFIVNVKIPKQISDPERALLENLALHKASNRVKGNFNKHVNEDQKHFHGSHREEQASSWWHSIKGVFGYILDSMFLFDVDML 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 137880 143691 + BLOR06414 Blo15g00020 70420

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00020 498 Hamap Chaperone protein DnaJ [dnaJ]. 82 463 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Blo15g00020 498 CDD DnaJ_C 205 428 - -
Blo15g00020 498 ProSiteProfiles dnaJ domain profile. 85 149 IPR001623 -
Blo15g00020 498 SMART dnaj_3 84 141 IPR001623 -
Blo15g00020 498 Gene3D - 233 298 - -
Blo15g00020 498 Gene3D - 205 340 - -
Blo15g00020 498 ProSiteProfiles Zinc finger CR-type profile. 220 303 IPR001305 GO:0031072|GO:0051082
Blo15g00020 498 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 220 300 IPR036410 -
Blo15g00020 498 Pfam DnaJ domain 85 146 IPR001623 -
Blo15g00020 498 CDD DnaJ_zf 233 298 IPR001305 GO:0031072|GO:0051082
Blo15g00020 498 Pfam DnaJ central domain 233 298 IPR001305 GO:0031072|GO:0051082
Blo15g00020 498 PRINTS DnaJ domain signature 141 160 IPR001623 -
Blo15g00020 498 PRINTS DnaJ domain signature 121 141 IPR001623 -
Blo15g00020 498 PRINTS DnaJ domain signature 87 105 IPR001623 -
Blo15g00020 498 PRINTS DnaJ domain signature 105 120 IPR001623 -
Blo15g00020 498 PANTHER EXPRESSED PROTEIN 90 448 - -
Blo15g00020 498 Pfam DnaJ C terminal domain 206 425 IPR002939 -
Blo15g00020 498 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 90 448 - -
Blo15g00020 498 TIGRFAM DnaJ_bact: chaperone protein DnaJ 85 440 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Blo15g00020 498 Gene3D DnaJ domain 81 187 IPR036869 -
Blo15g00020 498 SUPERFAMILY HSP40/DnaJ peptide-binding domain 205 345 IPR008971 GO:0006457|GO:0051082
Blo15g00020 498 CDD DnaJ 85 138 IPR001623 -
Blo15g00020 498 Gene3D - 346 458 - -
Blo15g00020 498 SUPERFAMILY HSP40/DnaJ peptide-binding domain 350 436 IPR008971 GO:0006457|GO:0051082
Blo15g00020 498 ProSitePatterns Nt-dnaJ domain signature. 126 145 IPR018253 -
Blo15g00020 498 SUPERFAMILY Chaperone J-domain 81 192 IPR036869 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00020 K03686 dnaJ; molecular chaperone DnaJ - zju:107435129 589.341
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00527 Blo-Chr10:12868402 Blo15g00020 Blo-Chr15:137880 8.21E-53 dispersed
Blo14g00819 Blo-Chr14:27766581 Blo15g00020 Blo-Chr15:137880 1.00E-15 dispersed
Blo15g00020 Blo-Chr15:137880 Blo18g00120 Blo-Chr18:1102355 8.88E-49 dispersed
Blo15g00020 Blo-Chr15:137880 Blo07g00696 Blo-Chr7:22714322 1.71E-129 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g173 . . Bda06g00866 . . . . Bma12g01283 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy12g01585 . . Blo15g00020 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007152 1 1 1 1 0 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 2 1 1 1 3 1 0 1 0 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00020 Blo_Chr15 FPKM 6.547941 7.594069 6.379581 6.51692 14.586335 13.557095 15.110559 7.232557 6.545156 7.317984