Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00035 ATGGCTGGTGGTGTTGATAAAGATGATGTTCCAATGTTATCGGACACAAACCCATCATTATATGATGCACAAAGGAATTCTCGATTTCAGTCATTTAATTCAGCTTCACGAAGTTCATCAGTTTCAATTCCGATGAATACCATTTCATCCTACGACTCCAATGCTAATCTCGCTGGCTATATGGGCCCTCTATGGAGCGAAAGAAGATCGCCTTTTCCACAGATGAGGGGAAATGAACCAACGGTAAAACAATTTCGATCTTGGGAAGGAAATGGCAAAGCAGGTTGGTCCAATAGGAACAATGATAGAAAAAATCAACATTTATTGCGGTCTGGTCGGTTGGGACAGTGTAGTGATCCTTATTGCACGACTTGTCCAACCTACAATCTTAAAACTGCACAGCAGAAGAGTTCAAGAGTCTCTGGCTTATTTGAACACAAGTTTCATAATGCTCTTTACGGGGACGCCAAAGGGTGGGCTAGGAAGTTTTGGTCCTTTATGAATCCATATATTCCAGGAGTGATGAATCCTCATACAAAGATTATCCAAAAGTGGAACAAGTTTTTTGTTATTGCTAGCTTAGTGGCGATTTTTTTGGACCCTTTATTTTTCTTCCTACTTTCTGTCCATCAGGATAGTAAGTGCATAGTTTTAGATTGGCCCATGACTAAAACGCTAGTGGTTCTCAGAAGCATGACAGATACTATTTACTTTCTCCACATCCTCCTTCAGTTTAGGTTGGCCTATGTGGCTCCTGAAACTAGAGTAGTTGGAGCAGGAGAATTAGAGGACCATCCAAAGAAAATTGCTCTCAATTACCTTAAGAGTTTCTTTTTTGTTGACTTATTTGCAGCATTGCCACTTCCTCAAATTATAGTTCTATTTATACTACCGAAATCGCTAGGATCGTCTGGAGCAAACTACGCGAAAAATCTTTTACGTTTAGCAATTCTTGTGCAATACATACCCAGATTGTTTAGAGTTCTGCCACTTCTGATTGGTCAGTCTCCAAATGGCTTCATATTTGAGACAGCATGGGCCAATTTTGTTTTGAATCTTTTCACTTTCATGTTGTCTGGCCACTTCGTCGGCTCTTTCTGGTACCTCTTTGGATTACAGAGGGTCAACCAATGTATTCGAATTGCCTGCCAAAACTCTGGAATTCAATCCTGCCGGACATTTATAGATTGTGGACATGGGGATGATGTTAACAGATTTGATCGTTATCCAACTTGGAATATCTGGAAAAGCAACGAGAATGCCACCGCTTGCTTTAATTCAAGTGCATATTCTTACGGGATTTACGTTCAAGCCGTCAATCTAGTCGCAGAAAGTAGTACGATCAAAAGATACATCTACTCCCTTTTTTGGGGATTTCAGCAAATCAGTACTCTTGCTGGGAATCAAGTTCCAAGCTATTTTGTGTGGGAAGTTCTTTTCACTATGGGCATTATTGGACTCGGTCTTTTGTTATTTGCTCTACTCATTGGAAATATGCAAAACTTCCTCCAGGCTCTCGGTCAACGAAGGTTGCAAATGTCATTAAGACAGCGTGACGTCGAGCTGTGGATGGCACATCGAAGTTTGCCCGACGAACTCAGAAGGCAAGTACGAGAAGCCGAAAGGTTCAATTGGGCTGCAACGAGAGGCGTAAACGAAGAAATGCTTTTGGTGAATTTGCCCGATGATCTTCAAAGAGATATACGACGCCATCTCTTCACGTTCCTAAAGAAAGTTAGGATTTTTTCGCTGATGGACGAACCGATTTTGGATTCGATACGGGAGAAACTGAGACAAAGGACGTATATACAAGGAAGTGAAGTCTTTTTCCAAGGTGGTCTCGTCGAGAAGATGGTTTTCATCGTTAGAGGAAAAATGGAGAGTTTGGGGGCCGACGGGATCGTGGTCCCGTTGTCGGAAGGAGACGTTTGTGGGGAAGAACTTCTAGCTTGGTGTCTCGAACATTCTTCCGTAAATAGAGACGGGAAAAGAGCTGGCATCGCCGGACACAGATTGGTCAGCACCCGGACCGTGCGTTGCTTGACGAACGTGGAAGCGTTTTCTCTCCAAGCTGCCGATCTCGAAGGAGTGACAAGTCTTTTTGCAAGATTCTTGCGAAATCATCGTGTTCAAGGAGCCATACGGTATGAATCTACCTACTGGAGAAGCTTAGCAGCTAATAGGATTCAAGTCGCATGGAGATACCGGAAAAAGCGTCGAATTCGAGCCGACTCGGCTTGA 2241 42.97 MAGGVDKDDVPMLSDTNPSLYDAQRNSRFQSFNSASRSSSVSIPMNTISSYDSNANLAGYMGPLWSERRSPFPQMRGNEPTVKQFRSWEGNGKAGWSNRNNDRKNQHLLRSGRLGQCSDPYCTTCPTYNLKTAQQKSSRVSGLFEHKFHNALYGDAKGWARKFWSFMNPYIPGVMNPHTKIIQKWNKFFVIASLVAIFLDPLFFFLLSVHQDSKCIVLDWPMTKTLVVLRSMTDTIYFLHILLQFRLAYVAPETRVVGAGELEDHPKKIALNYLKSFFFVDLFAALPLPQIIVLFILPKSLGSSGANYAKNLLRLAILVQYIPRLFRVLPLLIGQSPNGFIFETAWANFVLNLFTFMLSGHFVGSFWYLFGLQRVNQCIRIACQNSGIQSCRTFIDCGHGDDVNRFDRYPTWNIWKSNENATACFNSSAYSYGIYVQAVNLVAESSTIKRYIYSLFWGFQQISTLAGNQVPSYFVWEVLFTMGIIGLGLLLFALLIGNMQNFLQALGQRRLQMSLRQRDVELWMAHRSLPDELRRQVREAERFNWAATRGVNEEMLLVNLPDDLQRDIRRHLFTFLKKVRIFSLMDEPILDSIREKLRQRTYIQGSEVFFQGGLVEKMVFIVRGKMESLGADGIVVPLSEGDVCGEELLAWCLEHSSVNRDGKRAGIAGHRLVSTRTVRCLTNVEAFSLQAADLEGVTSLFARFLRNHRVQGAIRYESTYWRSLAANRIQVAWRYRKKRRIRADSA 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 280556 286235 + BLOR06429 Blo15g00035 70435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00035 746 Gene3D - 186 502 - -
Blo15g00035 746 CDD CAP_ED 581 708 IPR000595 -
Blo15g00035 746 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 6 744 - -
Blo15g00035 746 SUPERFAMILY cAMP-binding domain-like 509 703 IPR018490 -
Blo15g00035 746 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 744 - -
Blo15g00035 746 SUPERFAMILY Voltage-gated potassium channels 177 509 - -
Blo15g00035 746 MobiDBLite consensus disorder prediction 1 24 - -
Blo15g00035 746 SMART cnmp_10 581 713 IPR000595 -
Blo15g00035 746 ProSiteProfiles cAMP/cGMP binding motif profile. 581 649 IPR000595 -
Blo15g00035 746 Gene3D Jelly Rolls 579 703 IPR014710 -
Blo15g00035 746 Pfam Ion transport protein 185 509 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo15g00035 746 Gene3D Helix hairpin bin 503 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00035 Blo-Chr15:280556 Blo06g01081 Blo-Chr6:34137623 9.79E-134 dispersed
Blo13g00116 Blo-Chr13:2340115 Blo15g00035 Blo-Chr15:280556 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00035 K05391 - jre:109012085 1062.37