Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00036 ATGGAGTTCGGTAGTGGAGGCGGTGGCTCCGGTGGGGATGATGATTTGTTTTCCGACCAAAAGAAGGGAAAGAAACGCTACCATCGTCATACTGCTCGTCAGATTCAGAAGCTCGAAGCGATGTTCACCGAGTGCCCTCACCCAGATGAAAAACAGAGAATGCAGTTGAGCAGAGAACTGGGTTTGGCGCCTCTGCAAATCAAATTCTGGTTCCAAAACAGAAGAACCCAGATGAAGGCCCAACACGAGAGAGCAGACAACTGTTCTCTTCGCTCAGAGAACGACAAGATCAGATGTGAAAACATTGCAATAAGAGAAGCTTTCAAAAATTTGATTTGTCCATCTTGTGGTGGACCTCCCCTCACCGAAGATTCCTATTTCGATGAGCAGAAACTTCGCATGGAGAATTCCGAATTGAAACAAGAGCTTGACAGAGTTTCCAGCATTGCAGCTAAATTCATGGGGAGGCCAATTTCCCAACTCCCACCTGTTCACCCTATCCATATTTCCTCTCTTGAGCTATCAATGGGTAATTTTGGAATTGCTGGTCATTCTCTCGATCTTGATCTTCTCCCAGGAACCTCATTGACTGGTCAGTCTTTACCTTTCCAGTCGATCGGCTTATCCGACGTGGATAAATCCCTGATGGCTGATATAGCTGCACATTCAATGGAAGAACTAATCAGTCTTGCACAATCAAATGAACCATTCTGGATGAAATCCTCCACACATGGTAAAGACGTTCTTAATCTCGAAAATTATGACCGGATTTTCTACAAGCCTTCAGTCCAATTGAAAAATCCCCATCTTCGAATTGAAGCATCTAGAGATTCTGGTGTTGTTATAATGAATTCCTTAACATTGGTGGACATGTTTATGGACTCTAACAAGACGATGGAGCTATTTCCCGGCATTATTTCATCGGCAAGAACAATGGAGGTGATTTCGTCCGGATTATTGGGTAGCCATAGTGGAACTTTACTTCTGATGCATGAAGAATTACAGGTCCTGTCTCCATTAGTACCAACTCGAGAGTTCTATTTCTTAAGATATTGCCAGCAAATCGATCAGGGGTTGTGGGCAATATGCGATGTTTCGTACGATTTTCATGGGGAAAATCGGTGCGCTGCCCAGTTTCAATCTCATCGGCTTCCATCAGGATGCCTAATTCAAGACATGCCCAATGGTCATTCTAAGGTTATCTGGGTTGAACATGTGAAAATCGAAGACAAAAACCCTCCTCATCGACTCTTTCGAGACCTATTTTATGGCGGCATCGCGTTCGGCGCTGAAAGATGGGTTGCCACTCTCCAGAGAATGTGCGAAAGATTTGCCTCTTCAATGGCTGCAGCCAATGCTGCCCGCGAACTCGAAGGAGTAATTCCTTCGCCGGACGGCAAGAGGAGCACGATGAAACTGGCCCAGCGAATGATCAACAACTTTTGTGCGAGTATCAGCACATCGAACGGTCACCAATGGACGACTCTTTCGGGACAAAACGAGGTTAGAGTTAGAGTCACGGACCATAAAAGCAATAATCCTGGCCAACCCAATGGCGTGGTTCTTAGTGCAGCCACCACAATTTGGCTCCCCATTTCCCCGCAGGACGTCTTCGATTTTTTCAGAGACGAACGAACTCGATCACAGTGGGATGTTCTTTCTGATGGAAATGCAGTTCAAGAGGTTGCTCATATCACCAACGGATCACATCCCGGAAATTGCATATCGATTCTTCGAGCCCTCAACACCAGCCAGAACAACATGTTGATACTCCAAGAAAGTTGCACAGATTCATCAGGGTCGATGGTTGTCTACTGCCCGGTCGATCTTCCGGCCATTAACATCGCGATGAGTGGAGAAGACCCTTCGTATATTCCATTGCTACCGTCCGGGTTTGTCATATCGCCAGACGGTCGAGCCGAACAATCGGACAGTGGGCCTTCGACGAGCTCCGGGCAATCGGGTGGGTCGTTGATTACAGTAGCATTTCAGATACTAATGAGCAGCCTGCCATCAGGTAAACTAAACTTAGAGTCAGTGACAACTGTTAATAACCTTATTGGAACCACTGTCCAGCAAATTAAGACAGCTCTGAACTGCCCCAGTTCTTGA 2112 46.31 MEFGSGGGGSGGDDDLFSDQKKGKKRYHRHTARQIQKLEAMFTECPHPDEKQRMQLSRELGLAPLQIKFWFQNRRTQMKAQHERADNCSLRSENDKIRCENIAIREAFKNLICPSCGGPPLTEDSYFDEQKLRMENSELKQELDRVSSIAAKFMGRPISQLPPVHPIHISSLELSMGNFGIAGHSLDLDLLPGTSLTGQSLPFQSIGLSDVDKSLMADIAAHSMEELISLAQSNEPFWMKSSTHGKDVLNLENYDRIFYKPSVQLKNPHLRIEASRDSGVVIMNSLTLVDMFMDSNKTMELFPGIISSARTMEVISSGLLGSHSGTLLLMHEELQVLSPLVPTREFYFLRYCQQIDQGLWAICDVSYDFHGENRCAAQFQSHRLPSGCLIQDMPNGHSKVIWVEHVKIEDKNPPHRLFRDLFYGGIAFGAERWVATLQRMCERFASSMAAANAARELEGVIPSPDGKRSTMKLAQRMINNFCASISTSNGHQWTTLSGQNEVRVRVTDHKSNNPGQPNGVVLSAATTIWLPISPQDVFDFFRDERTRSQWDVLSDGNAVQEVAHITNGSHPGNCISILRALNTSQNNMLILQESCTDSSGSMVVYCPVDLPAINIAMSGEDPSYIPLLPSGFVISPDGRAEQSDSGPSTSSGQSGGSLITVAFQILMSSLPSGKLNLESVTTVNNLIGTTVQQIKTALNCPSS 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 291196 294105 + BLOR06430 Blo15g00036 70436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00036 703 SUPERFAMILY Bet v1-like 464 695 - -
Blo15g00036 703 Pfam Homeodomain 24 79 IPR001356 GO:0003677
Blo15g00036 703 Gene3D - 217 420 IPR023393 -
Blo15g00036 703 ProSiteProfiles START domain profile. 209 446 IPR002913 GO:0008289
Blo15g00036 703 MobiDBLite consensus disorder prediction 636 655 - -
Blo15g00036 703 SUPERFAMILY Bet v1-like 211 445 - -
Blo15g00036 703 MobiDBLite consensus disorder prediction 641 655 - -
Blo15g00036 703 ProSitePatterns 'Homeobox' domain signature. 56 79 IPR017970 GO:0000981|GO:0006355
Blo15g00036 703 Pfam START domain 219 443 IPR002913 GO:0008289
Blo15g00036 703 SMART HOX_1 23 85 IPR001356 GO:0003677
Blo15g00036 703 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 701 IPR042160 -
Blo15g00036 703 CDD START_ArGLABRA2_like 213 442 - -
Blo15g00036 703 Gene3D - 14 95 - -
Blo15g00036 703 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 5 701 - -
Blo15g00036 703 ProSiteProfiles 'Homeobox' domain profile. 21 81 IPR001356 GO:0003677
Blo15g00036 703 CDD homeodomain 24 82 IPR001356 GO:0003677
Blo15g00036 703 SUPERFAMILY Homeodomain-like 10 81 IPR009057 -
Blo15g00036 703 Gene3D - 461 660 IPR023393 -
Blo15g00036 703 SMART START_1 218 443 IPR002913 GO:0008289
Blo15g00036 703 Coils Coil 129 149 - -
Blo15g00036 703 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00978 Blo-Chr13:32217182 Blo15g00036 Blo-Chr15:291196 0 dispersed
Blo15g00036 Blo-Chr15:291196 Blo15g00501 Blo-Chr15:8462599 0 dispersed
Blo16g00629 Blo-Chr16:25131110 Blo15g00036 Blo-Chr15:291196 0 dispersed
Blo18g00492 Blo-Chr18:6060290 Blo15g00036 Blo-Chr15:291196 0 transposed
Blo19g00207 Blo-Chr19:10098204 Blo15g00036 Blo-Chr15:291196 0 transposed
Blo13g00115 Blo-Chr13:2231621 Blo15g00036 Blo-Chr15:291196 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13288 PF01852 START 5.00E-45 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00036 K09338 - qsu:112030574 1082.78