Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00061 ATGGATCAAATGGAAGTGTTCTTGATTTCAATAAAATCGGAATCAAGGGAGTCAAAAATCAAGGGAGTTCATCTATCTGAAACTTTTTCTAAGAAATCGGAATCAAAAGGCAGTCAAAAATCGGAATCAAGGGAGCTGAGCAGAGCAAACAAACTAGACCAGAAAAATCAGGGGAGAAATCAAACTATATTACTAGTCCTCATCGCAAATCGCAGCCGCACAGTTTCACAGTTGTCGTCGCAGGATCGCAGTGCTCGTCGCAGGTTCACAATGCCCGTCGGAGGCATTGAGGACTGGGCTTTTCAGCACAGGCCCATGAGAGTCTTTGTGGCCTGTCTGTGGTTAGGGTCGACCCAATCTTCTGCCTTTTCGTCAATCATCACTGAGCTCATGTCACACAAGTGGACGTTCAAGAAGCTTCAAGGCAGAATGAGTGGAAGCGCAAATTCGGCCACTGGAAATGAGAGCTTGAAAGCTGAATGCAACTCTAAGCGGGAGGCTGAGGTTGAAGGTGCTGATGTGATCGCGAAGAAGCTAAAAACTGAAGCTGCTTCGGAATCTACTGACAGCCGTCTTGGTGGTGATGTGCGCAAGCAAAATAATGGTTCTGCGGTTGTTAAGATGAGTAGAGAAGTGATTTTTGAGATTGAAGCTGATGTGGCTGAGGATAAGGGATCTAGGCATGCTATGGAGGATGCTAGCGTCGTGCTTTTGGATGCCAGCATGGATTTCCCTGGAAAATTGAGATGTGCTCATTTTGCTGTCTACGATGGACATGGAGGTCGATTAGCGGCAGAGCACGCCCAAAAGCATTTACATTTGAATGTGCTCTCAGCTGGCTTACCACGTGAGTTGGTGGATGTAAAAGCAGCCAAAAGAGCAATTTTAGATGGTTTTCGAAAGACTGATGAATCACTTCTTCAAGAAAGTACTGCTGGGGGATGGCAAGATGGCGCTACTGCTGTGTGTGTCTGGATTTTAGGGCAAAAAGTTTTTGTTGCTAATGTTGGGGATGCAAAGGCTGTGGTTGCACGATCTCCTGCAGGTACTAATTTGCACAATCATCCTGAATGTGAAAGTTCCTTAAAGGCTATAGTTTTGACTAGGGAACACAAAGCAATATATCCACAGGAGCGAGCTCGGATTGAGAAGGCTGGTGGTATAGTTAGCTCTAATGGGAGAATACAGGGGCGCCTGGAAGTATCTCGGGCATTTGGAGATCGCCAATTCAAGAAGGTAGGTGTCATTGCAACCCCAGATATACATTCATTTGACTTAACTGAAAGGGACCATTTTATTATTATTGGTTGTGATGGCCTCTGGGGGGTATTTGGGCCTAATGATGCTGTTGATTTTGTTTGGAAATTGTTGAAGGCAAGACTACTTGATGACTTATCAGTAACAGCTGTGAGTCGCCAGCTTGTAAGAGAAGCCATTCGAGAGCGGCGCTGTAAAGATAACTGTACTGCAATTGTCATTGTTTTCCGGCATAAGTCAGACTAG 1503 45.31 MDQMEVFLISIKSESRESKIKGVHLSETFSKKSESKGSQKSESRELSRANKLDQKNQGRNQTILLVLIANRSRTVSQLSSQDRSARRRFTMPVGGIEDWAFQHRPMRVFVACLWLGSTQSSAFSSIITELMSHKWTFKKLQGRMSGSANSATGNESLKAECNSKREAEVEGADVIAKKLKTEAASESTDSRLGGDVRKQNNGSAVVKMSREVIFEIEADVAEDKGSRHAMEDASVVLLDASMDFPGKLRCAHFAVYDGHGGRLAAEHAQKHLHLNVLSAGLPRELVDVKAAKRAILDGFRKTDESLLQESTAGGWQDGATAVCVWILGQKVFVANVGDAKAVVARSPAGTNLHNHPECESSLKAIVLTREHKAIYPQERARIEKAGGIVSSNGRIQGRLEVSRAFGDRQFKKVGVIATPDIHSFDLTERDHFIIIGCDGLWGVFGPNDAVDFVWKLLKARLLDDLSVTAVSRQLVREAIRERRCKDNCTAIVIVFRHKSD 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 489600 495425 + BLOR06455 Blo15g00061 70461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00061 500 ProSiteProfiles PPM-type phosphatase domain profile. 217 495 IPR001932 -
Blo15g00061 500 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 143 492 - -
Blo15g00061 500 PANTHER PROTEIN PHOSPHATASE 2C 143 492 IPR015655 GO:0004722|GO:0006470
Blo15g00061 500 CDD PP2Cc 220 495 IPR001932 -
Blo15g00061 500 SUPERFAMILY PP2C-like 208 496 IPR036457 -
Blo15g00061 500 Gene3D - 215 500 IPR036457 -
Blo15g00061 500 MobiDBLite consensus disorder prediction 18 52 - -
Blo15g00061 500 SMART PP2C_4 206 493 IPR001932 -
Blo15g00061 500 MobiDBLite consensus disorder prediction 18 53 - -
Blo15g00061 500 Pfam Protein phosphatase 2C 221 483 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00061 Blo-Chr15:489600 Blo18g00040 Blo-Chr18:265747 1.08E-36 dispersed
Blo15g00061 Blo-Chr15:489600 Blo17g00030 Blo-Chr17:170237 9.85E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00061 K17500 - csv:101216467 504.597