Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00063 ATGTCTGAGCTAGATTTGTCGAAGAAAGTAGCCGATAGATACCTGAAACGCGAGGTTCTGGGTGAAGGCACTTATGGAGTTGTCTATAAAGCCATTGATACGAAGACAGGCCAGACAGTTGCAATTAAGAAAATTCGACTGGGGAAGCAGAAAGAGGGCGTAAATTTCACTGCCCTCCGAGAGATAAAACTGCTGAAGGAGCTTAAAGATCCTAATATAATTGAGTTAATAGATGCATTTCCTCATAAGGGAAACTTGCATCTTGTATTTGAATTCATGGAGACGGACCTTGAAGCTGTCATACGAGATAGAAGCATATTTCTCTCGCCAGCTGACATTAAATCATACCTAAAAATGACGTTGAAAGGTCTTGCTATTTGCCACAAGAAATGGGTTTTACACAGGGACATGAAGCCAAACAATCTATTGATAGGATCTAATGGACAGTTAAAATTAGCAGATTTTGGATTGGCAAGAATATTTGGGAGCCCAGATCGAAAATTCACTCATCAGGTCTTCGCACGATGGTACAGAGCACCTGAGTTATTATTTGGGACCAAACAATATGGATCTGGAGTAGATGTTTGGGCTGCAGCTTGTATTTTCGCTGAACTTCTCCTTCGTCGACCATTTCTACAGGGTTCCAGTGACATTGATCAATTAGGAAAGATTTTTGCTGCATTTGGGACACCCACGCCTTCACAGTGGCCAGACATTGTGTATTTGCCAGATTATGTTGAGTATCAATATGTTCCTGCACCTCCTTTACGATCATTATTTCCAATGGCAAGTGATGATGCGTTAGACCTTCTGTCAAAGATGTTCTCATATGATCCAAATGCTAGAATATCAGTTCAACAGGCATTAGACCACAGATACTTTGCATCTGTGCCTCTACCTGCCGATCCTGATAAGCTTCCTAGACCTGCACCAAAGAAGGAATTGCTGCGTACGAATGAGGGTCCAATTGTTCTCTCACCTCCAAGGAAATCAAGGAGAGTGATGCCAGAACGTACCGGCCTTGAGGGAAATGTATACCAAGGCGATAAGGTTGACAATCGTGGTGGACAAGTAGTTGGAGCAAGCAAGAACGAACCGATTCCAATGTCAGTGGATTTTTCTATTTTTGGCGCAAAACCTTCCAATAGACCAACAATTAACAGCGCTGATAGATCACATCTTAAAAGGAAGTTGGATCTGGAATTCCAACAGTAA 1215 42.14 MSELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRSIFLSPADIKSYLKMTLKGLAICHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDIVYLPDYVEYQYVPAPPLRSLFPMASDDALDLLSKMFSYDPNARISVQQALDHRYFASVPLPADPDKLPRPAPKKELLRTNEGPIVLSPPRKSRRVMPERTGLEGNVYQGDKVDNRGGQVVGASKNEPIPMSVDFSIFGAKPSNRPTINSADRSHLKRKLDLEFQQ 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 501607 504058 - BLOR06457 Blo15g00063 70463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00063 404 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Blo15g00063 404 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Blo15g00063 404 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00063 404 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00063 404 SUPERFAMILY Protein kinase-like (PK-like) 9 301 IPR011009 -
Blo15g00063 404 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 353 - -
Blo15g00063 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Blo15g00063 404 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Blo15g00063 404 PANTHER CELL DIVISION PROTEIN KINASE 9 353 - -
Blo15g00063 404 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00063 404 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00180 Blo-Chr13:6894448 Blo15g00063 Blo-Chr15:501607 0 dispersed
Blo14g00502 Blo-Chr14:6782258 Blo15g00063 Blo-Chr15:501607 2.10E-20 dispersed
Blo15g00063 Blo-Chr15:501607 Blo14g00309 Blo-Chr14:3171741 1.10E-73 dispersed
Blo15g00063 Blo-Chr15:501607 Blo13g00685 Blo-Chr13:29587981 5.86E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84702 PF00069 Pkinase 4.20E-71 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00063 K02202 - qsu:112031301 726.857