Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00066 ATGGCGACTCCTTATACGGGATTGCAGCTCAGAGACGGAGGTGGAGTGGCAGTGCTGTCGAATTCAGTGAATAAGGTAGATGCGTCTTCGTCTCCGTCACCGTCTCCTTCGTCGTCAAATGGTGGTTGTTTGAGGAGCTCCGAGCCTATGTCTCCTATTCTGATTTTTTTGTTCTTTCACAAAGCGATTCGTTATGAGCTTGATGCGCTTCACAAGTTCGCTATGGCCCTCGCTACCGGCCGGCGAACTGATATTCAGCCTCTTATCAAGCGATACCATTTTCTCAGATCAATTTATAAACATCACTCCAATGCCGAAGACGAGGTAATTTTTCCAGCACTTGACATTCGTGTGAAGAATGTAGCTCAAACATACTCTCTTGAGCACAAAGGAGAAAGCAACCTTTTTGATCATCTTTTTGAGCTCCTTAATTCAAGTACACAAGATGATGAATGCTTCTCTCGGGAGTTGGCGTCTTGTACCAGGGCATTAAGGACATCAGTTAGCCAACACATGGCCAAGGAAGAAGAGCAGGTCTTTCCCTTGCTCATGGAGAAGTTCTCTCTTGATGAGCAAGCGTCTCTGGTCTGGCAATTATTTTGCAGTATTCCTGTTAATATGATGGCTGAATTTCTTCCTTGGCTAGCATCATCTATTTCACCAGATGAATCTCAGGATCTGCGGAAATGTTTGAGCAAGATAGTTCCCAAGGAAAAGCTTCTTCAACAGGTCATATTTACGTGGATGGAAGGGAGAACTGGTGCTGTCATTGCTAAAAATCGTGTTGATGATTCTTTCGGTGGATGTTGTGCTGATAGTAGCATTTGCATATCATCCCATGAAACAGAAAAAGTAATGAGAGCTTGTGAAGGGATGACTACTGGAAAAAGGAAACATGTTGACTTTAGTGATGATACTACTGATGTCATGGAGACACATCCAATAAATGAAATATTGCTTTGGCACAATGCGATTAAAAAGGAGTTGACTGAAATAGCTGAAGAGGCTAGGAAAATACAACACTCTGGAAATTTTGATAATCTTTCTGCCTTCAATGAGAGACTGCATTTCATTGCTGAAGTTTGCATCTTTCACAGTATTGCTGAAGACAAGGTTATCTTTCCGGCAGTAGATGGTGAGTTATCCTTTCTTCAGGAGCACGCTGAAGAAGAAAGTCAATTTAATGAATTCAGGTCGTTGATGGAAGGTATTCAAAGTGATGGATCAGTGTCTAATTCAACAGCTGAATTTTACTCAAAGTTATGTTCACTTGCCGATCAAATTATTGATACAATTCAGAGGCACTTCAATAATGAGGAACTTCAGGTTCTTCCGCTTGCTCGAAAGCACTTTAGCCTCAAACAACAGCGGGAACTTCTGTATCGTAGCTTGTGCATGATGCCCCTGAAATTAATTGAGCGTGTCTTGCCATGGCTGGTTGGGTCATTATCAGAAGATGAAGCTGGAAATCTTCTGAAAAACATCCAATTGGCAGCTCCTACATCTGATACTGCTTTAGTGACACTCTTTTCTGGCTGGGCTTGCAAGGCTCGGAACCGAGGTTTATGCTTGTCTTCAAGAGGGACTGGTAGCTGTCCAGTAAAAAGGCTTATTGACATTGAAGAAAATGTTGTTCCATCATTTTGTTCACATGCTTCTGCATTACCTGCAAGAGATAGTAAATCATCAAGTAAAGAAAATAACTTTGAAAGGCCGGCTAAACGAAATGTCTCAGTTTCATGCAAAAATTGTGATGCCTCTAGTTTGTTAGAGGCTGCTAACTTGCAGCATCCTTGCTGTAGTGATGAATCTTGTTGTGTGCCAGGTTTAGGAGTAAATAGCAATAATCTAGGCTTGAGTTCTCTTTTTACATCAAAGTCTTTGTGTTCCTTATCTCCGAGCTCTGGGGCCCCTTCTCTCAACTCGAGTCTTTTCTCATGGGAAACAGATATTAACTTTTCTGACGTTGAGGCTTCAGGACGACCAATTGATACTATTTTTAAGTTTCATAAAGCTATCAGGAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAGCTTAATCAATGTGATGAGACATTCCTACGGCAATTTAGTGGGAGATTTCGCCTGCTATGGGGATTGTATCGAGCTCATAGTAATGCTGAAGATGATATAGTGTTCCCTGCTCTAGAATCCAAAGAGGGATTGCACAATGTTAGTCACTCGTACACACTGGACCATAGACAGGAGGAAAAGTTATTTGAAGACATTTCAAGTGTTCTTTTGGAGCTTTCTCATCTACATGGAAACTCCTCTTTGGATATTGATTCATCTGGAAATCAGCTTGGAAAGCATGTTGAGCTAGCAACAAAGCTTCAAGGAATGTGCAAATCTATAAGAGTGTCACTTGATCAGCATATTTTCAGGGAGGAACTCGAGCTATGGCCATTGTTTGGAAAACATTTCTCTGTGGAGGAGCAAGACAAAATAGTTGGGCAGATCATTGGAACAACAGGTGCAGAAGTACTCCAATCAATGTTACCATGGGTAACTTCGGCACTGACACAGGACGAACAAAATATAATGATGGATACTTGGAAGCAAGCCACAAAGAATACCATGTTCAGTGAATGGCTCAATGAATGTTGGAAAGGAATCGAGGCATCTACTTCACGTACGGGGATATTGGAAGCTAATATTGCTCAAAAAGGTGTTGAGATTCGAGAAGGCTTGGATCAGTGTGATCAGATGTTCAAGCCTGGCTGGAAGGATATTTTTCGAATGAATCAAAATGAGATTGAATCAGAGATTAGAAAGGTCTACCAGGATTTGACTCTTGATCCAAGAAGAAAGGCGTATCTTGTCCAGAATCTTATGACCAGTCGCTGGATTGCTGCCCAACAGAAGTTAACAGAAATTACGGTGGCAAGTTCTAACATTGAAGATGCAGCAGGACGTTCACCATCATATTGTGACCCTGAAAAAAGTAAATTTGGGTGTGAGCATTACAAAAGAAACTGCAAGCTCCGCGCTGCTTGCTGTGGGAAGTTGTTTACATGTCGGTTTTGTCATGATAATGTTAGCGACCACTCTATGGATAGGAAAGCAACCTCTGAGATGATGTGCATGCGCTGTTTGACAATTCAGGCTGTGGGGCCAACATGCTCAACTCCCTCATGCAATGGATTTTCAATGGCAAAATACTATTGCAATATATGCAGATTTTTCGATGATGAAAGAACTGTCTATCATTGCCCATTTTGCAACTTGTGCCGTCTGGGGAAAGGTCTTGGACATGACTATTTTCACTGCATGACGTGCAATTGTTGTCTGGGGATAAAGATTGTGGAACACAAGTGCCTGGAAAGAAGTTTAGAAACAAATTGTCCAATCTGCTGTGATTTTCTGTTCACTTCCAGTGCAACAGTCAGAGCTCTACCCTGTGGACATTACATGCATTCAGCTTGCTTTCAGGCATACACGTGTAGCCATTATACCTGTCCAATTTGCAGCAAGTCTTTAGGAGACATGGCGGTGTATTTTGGCATGCTTGATGCTCTGTTGGCTGCTGAAGAGCTTCCACAAGAGTACAGGGATCGTTGTCAGCAGGATATATTGTGCAACGACTGTGGCAAGAAGGGGACGACTCGATTTCATTGGTTATATCACAAGTGCGGACATTGCGGTTCATACAACACCCGGGTCATCAAAACAGAGACTATAAATGCAGATTGCTCATAA 3723 41.98 MATPYTGLQLRDGGGVAVLSNSVNKVDASSSPSPSPSSSNGGCLRSSEPMSPILIFLFFHKAIRYELDALHKFAMALATGRRTDIQPLIKRYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSTQDDECFSRELASCTRALRTSVSQHMAKEEEQVFPLLMEKFSLDEQASLVWQLFCSIPVNMMAEFLPWLASSISPDESQDLRKCLSKIVPKEKLLQQVIFTWMEGRTGAVIAKNRVDDSFGGCCADSSICISSHETEKVMRACEGMTTGKRKHVDFSDDTTDVMETHPINEILLWHNAIKKELTEIAEEARKIQHSGNFDNLSAFNERLHFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNEFRSLMEGIQSDGSVSNSTAEFYSKLCSLADQIIDTIQRHFNNEELQVLPLARKHFSLKQQRELLYRSLCMMPLKLIERVLPWLVGSLSEDEAGNLLKNIQLAAPTSDTALVTLFSGWACKARNRGLCLSSRGTGSCPVKRLIDIEENVVPSFCSHASALPARDSKSSSKENNFERPAKRNVSVSCKNCDASSLLEAANLQHPCCSDESCCVPGLGVNSNNLGLSSLFTSKSLCSLSPSSGAPSLNSSLFSWETDINFSDVEASGRPIDTIFKFHKAIRKDLEYLDVESGKLNQCDETFLRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEGLHNVSHSYTLDHRQEEKLFEDISSVLLELSHLHGNSSLDIDSSGNQLGKHVELATKLQGMCKSIRVSLDQHIFREELELWPLFGKHFSVEEQDKIVGQIIGTTGAEVLQSMLPWVTSALTQDEQNIMMDTWKQATKNTMFSEWLNECWKGIEASTSRTGILEANIAQKGVEIREGLDQCDQMFKPGWKDIFRMNQNEIESEIRKVYQDLTLDPRRKAYLVQNLMTSRWIAAQQKLTEITVASSNIEDAAGRSPSYCDPEKSKFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLTIQAVGPTCSTPSCNGFSMAKYYCNICRFFDDERTVYHCPFCNLCRLGKGLGHDYFHCMTCNCCLGIKIVEHKCLERSLETNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPQEYRDRCQQDILCNDCGKKGTTRFHWLYHKCGHCGSYNTRVIKTETINADCS 1240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 557250 565975 + BLOR06460 Blo15g00066 70466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00066 1240 Gene3D - 1195 1239 - -
Blo15g00066 1240 ProSiteProfiles Zinc finger RING-type profile. 1123 1165 IPR001841 -
Blo15g00066 1240 Gene3D nmb1532 protein domain like 657 875 - -
Blo15g00066 1240 SUPERFAMILY Zinc hairpin stack 1060 1116 IPR037275 -
Blo15g00066 1240 MobiDBLite consensus disorder prediction 25 44 - -
Blo15g00066 1240 CDD Hr-like 55 181 - -
Blo15g00066 1240 Pfam Hemerythrin HHE cation binding domain 313 447 IPR012312 -
Blo15g00066 1240 Pfam Hemerythrin HHE cation binding domain 662 811 IPR012312 -
Blo15g00066 1240 Pfam Hemerythrin HHE cation binding domain 57 183 IPR012312 -
Blo15g00066 1240 SUPERFAMILY RING/U-box 1122 1168 - -
Blo15g00066 1240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1116 1167 IPR013083 -
Blo15g00066 1240 SUPERFAMILY CHY zinc finger-like 987 1050 IPR037274 GO:0008270
Blo15g00066 1240 Pfam Zinc-ribbon 1170 1228 IPR039512 -
Blo15g00066 1240 PANTHER CHY ZINC FINGER PROTEIN 35 1239 - -
Blo15g00066 1240 Gene3D nmb1532 protein domain like 318 463 - -
Blo15g00066 1240 Gene3D nmb1532 protein domain like 51 201 - -
Blo15g00066 1240 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 35 1239 - -
Blo15g00066 1240 CDD RING-H2_Pirh2 1122 1165 - -
Blo15g00066 1240 ProSiteProfiles Zinc finger CTCHY-type profile. 1059 1122 IPR017921 -
Blo15g00066 1240 CDD Hr-like 664 810 - -
Blo15g00066 1240 Pfam CHY zinc finger 994 1069 IPR008913 GO:0008270
Blo15g00066 1240 CDD Hr-like 317 445 - -
Blo15g00066 1240 ProSiteProfiles Zinc finger CHY-type profile. 987 1056 IPR008913 GO:0008270
Blo15g00066 1240 SMART ring_2 1123 1164 IPR001841 -
Blo15g00066 1240 Pfam Ring finger domain 1122 1164 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00831 Blo15g00066 CCT
Blo04g00831 Blo15g00066 ECH
Blo13g00170 Blo15g00066 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00066 Blo-Chr15:557250 Blo02g00584 Blo-Chr2:10803319 2.36E-06 dispersed
Blo01g01360 Blo-Chr1:51674407 Blo15g00066 Blo-Chr15:557250 3.21E-48 transposed
Blo13g00170 Blo-Chr13:6011704 Blo15g00066 Blo-Chr15:557250 0 transposed
Blo15g00295 Blo-Chr15:3279227 Blo15g00066 Blo-Chr15:557250 5.31E-15 transposed
Blo15g00066 Blo-Chr15:557250 Blo04g00831 Blo-Chr4:8806497 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00066 K16276 - mnt:21402857 1936.0