Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00068 ATGGCAGAATTCACTCCAGACTTCCAGAGCTTGATGGATACGACTATGGATTTGACTGCTCAGTTCCCTTCTCTCAACCCAAAATTTCTGGACAGTTCGATGGATTTCCAGAGCTTCTTCTGCGTCTCAAGTGACTTATTTTATGCTCATCAACCGACCGAAAATCTGGAAATCATGGATGCAGTTTTCCCAAAAAGCAATCAAATTCCACAGCCAACACTTTCCGGAGGAAATGAATTCCATGAAAAGAGAAAGAGCAGCGCCATTGATGGATTAGAAACAAGCTCTGCAATCTCAACTCCTCAAGGTTCTGAAAATGGGATCAAAAGAAAAAAGAGCTCAGGCAGAGGCCGGAAAGTGAAAAACACTGACGGAGAAGAAGAGAAATCAGGGGAGATTGTTCATGTCAGAGCAAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGAGGAAAAATCAATGAAAGATTAAGATGCCTCCAAGATATTGTCCCAGGATGCTACAAGTCAATGGGTATGGCAGTGATGTTGGATGAGATCATCAATTATGTTCAGTCTTTGCAGCATCAGGTGGAGGGGTGGGCAGAACCGACGAGAACCGAGAACCGGACCCGGAACCGGAACCGAGGTCAGTTCTTGGTTCGGTTCTGGTTCTCGGTTCCACCAAAGGGGTCGGTTCCGGTTCCGGGTCCGGTTCTCGGTTCTCAGTTCCACCAAAGGGGTTTAATCGGTTCTCGGTTCTGTGATTTAAAATGGGTTCGGTTCTCTGTTTCAGAGGCCAAGGAAGAGGAGATCGAGAGGAAGAAAATGGAGGTCAGAGAGAAAGTTCAGCCTCAGCTCGGTTGTGTCGAGGAAGAAACCAAGCGTTTGGCTTTGATTTGCGAGAACCGCCGGTTCCGGACCCGGAACCGAGAACCGCCGGTTTCGGACCCGGAACCGACCTCGATTCCGAGTTCAGTTCCAGACCCGAACGGTTCCGAGTTTGGTACCGACTTCTCGGAACCGAGAACTGACTACTCTGTTCTAGACGATCCGGAACCGGAACCGGACCCGAAACCCGAAATGCCCACCCCTAATAAATTCATGTAA 1104 48.55 MAEFTPDFQSLMDTTMDLTAQFPSLNPKFLDSSMDFQSFFCVSSDLFYAHQPTENLEIMDAVFPKSNQIPQPTLSGGNEFHEKRKSSAIDGLETSSAISTPQGSENGIKRKKSSGRGRKVKNTDGEEEKSGEIVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMAVMLDEIINYVQSLQHQVEGWAEPTRTENRTRNRNRGQFLVRFWFSVPPKGSVPVPGPVLGSQFHQRGLIGSRFCDLKWVRFSVSEAKEEEIERKKMEVREKVQPQLGCVEEETKRLALICENRRFRTRNREPPVSDPEPTSIPSSVPDPNGSEFGTDFSEPRTDYSVLDDPEPEPDPKPEMPTPNKFM 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 571507 580340 + BLOR06462 Blo15g00068 70468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00068 367 PANTHER TRANSCRIPTION FACTOR BEE 1 2 197 - -
Blo15g00068 367 SMART finulus 148 198 IPR011598 GO:0046983
Blo15g00068 367 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 201 IPR036638 GO:0046983
Blo15g00068 367 MobiDBLite consensus disorder prediction 118 148 - -
Blo15g00068 367 MobiDBLite consensus disorder prediction 69 148 - -
Blo15g00068 367 MobiDBLite consensus disorder prediction 342 358 - -
Blo15g00068 367 MobiDBLite consensus disorder prediction 90 108 - -
Blo15g00068 367 Pfam Helix-loop-helix DNA-binding domain 146 193 IPR011598 GO:0046983
Blo15g00068 367 Pfam Transcriptional activator 260 300 IPR007033 -
Blo15g00068 367 MobiDBLite consensus disorder prediction 307 367 - -
Blo15g00068 367 Gene3D - 139 215 IPR036638 GO:0046983
Blo15g00068 367 MobiDBLite consensus disorder prediction 324 338 - -
Blo15g00068 367 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 142 192 IPR011598 GO:0046983
Blo15g00068 367 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 197 IPR024097 GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00825 Blo15g00068 CCT
Blo04g00825 Blo15g00068 ECH
Blo13g00169 Blo15g00068 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00068 Blo-Chr15:571507 Blo16g01026 Blo-Chr16:38619352 1.84E-32 dispersed
Blo13g00169 Blo-Chr13:5996705 Blo15g00068 Blo-Chr15:571507 1.59E-97 transposed
Blo15g00068 Blo-Chr15:571507 Blo04g00825 Blo-Chr4:8695695 1.54E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13291 PF04949 Transcrip_act 4.40E-13 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00068 - - jre:108998289 211.075