Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00070 ATGCGCGGAGGAAGACGAGGAGGGAGGAGAAGCTTCAAAGCGGAAGAGGCTTTAGAATTTCTGTACCAGAGAGTGGTTCTGAATCCTTTTCTTCTATATTCAATATCGTTTATTTTGGTTGTTTGGGCAATTGAGCGATGGGTTATTTCTTTCTCCAATTGGCTCCCCCTTGCCTTTGCTGTATGGGCCACCGTTCAGTATGGAAATTATCAACGCCACATACTCACTGAAGACTTGACTAAAAAGTGGAATCGAATCATCCTCAAAACTTCGTCGATAACAACAGTGGAGCATTGTGAATGGCTGAATAAACTGTTGATGGAAGTATGGTCCAGCTATATGAATCCCAAACTTTCAATTAGGTTCTCCTCCATCATTGAGAAAAAACTAAAGCAACGAAAGTCAAGACTTGTTGAAAGAATTGAGTTGCTAGAGTTTTCTCTTGGCACACATCCTCCTCTCTTGGGTCTTCATGGTACTCAATGGTCAACTTGCGGTAATCAGTTTAATAAGAACCTAGTTCTTCTTTTTGTATTTCAACAGAAAATCATGCGTTTAAATTTTGATTGGGACACAAAAGAAATGAGTATTTTGTTACAAGCTAAGCTAGGCAGGCCGTTTATTGGAACCGCAAGGATTGTTATCAATAGCCTGCACATAAAGGGTGATCTGCTTTTGAGGCCAATTCTGGATGGAAAAGCCATACTTTATTCATTTGTGTCCACCCCTGATGTACGAATTGGAGTTGCTTTTGGAAGTGGTGGCAGCCAATCACTACCTGCCACTGCGCTGCCTGGTGTATCATCTTGGTTGGTTAAAATCTTTACCGACACTTTGGTTAAGACAATGGTTGAACCTCGACGACGTTGCTTTTCGTTACCAGCTGTAGACTTGAGAAAAACAGTTGTTGGCGGTGTTATATACGTCACAGTTGTATCTGCAAGTAACCTTTCGAGAAATGAAGTGAGAGGAAGCCCATCAAAGCAGCGTACTAATTCTTTGAATTGTACACAAGGAGAGTACTTAACGAAGAAAATTCTTGAGACATTTGTTGAGGTTGAACTTGGGGATCTAAGTCGGAGAACTGGCACAAGATCAGGCTCGAGTCCTGTATGGAACTCGACATTTAACATGATTTTACATGAAGAAACAGAAATTCTTCGATTTCATCTTTATGAGTCCAATTCAAACAATGTGAAGTATGACTATCTGACCAGTTGTGAGATTAAGGTGAAGTATGTTGCTGACGATTCAATGACAATTTGGGCGATAGGAAATGGCTCTGGTGTTATTGCAAAACATACTGAGTGTTACGAGAAAGAAATCGAAATTGTTGTTCCCTTCGAAGGTGTCAGTTGTGGTGAGATTGTTTCTTATCTCTGTCTCTCTGACATAATTCATCATTTCTTGACAGTAAGGCTTGCCTTGAAGGAATGGCAATTTTCTGGAGGTTTGTATGGCTTGAACCGTCTTCGTTTAAGCTCCCAGCAATTCCTCTGTGGATCATCAAATTTTCTTCCAAGAACTGGAAGAAAAATTAACATTACTGTTGTGGAAGGAAAGAATCTTATTGTGAAAGACAGATCAGGAAAATCTGATCTATATGTTAAGATAAATTATGGCAAGGTTCTCCAGAAAACAAAAACTGCTCAATCTTATAATCCTATTTGGAACCAGATATTTGAATTCGATGAGATAGGAGGTGGTGAATACCTTAAGATAAAGTGTCATAGTGAAGATGTCTTTTATGATGACAGCATCGGCAGTGCGCGAGTAAATTTGGAAGGACTGGTAGAAGGATTAATTCGAGATGTATGGATTCCCCTCGAGAAAGTGAGCTCGGGAGAACTACGGCTCCAAATCGAAGCAGTCGGAGCAGACGACGAAGAAGGATCAATGGGTTCAAGCAATGGCTGGATTGAAATTGTTCTAATTGAAGCAAAAGATCTTGTAGCAGCTGATCTTAGGGGAACAAGTGATCCTTATGTGAGGGTTCAATATGGAAGCTTGAAGAAAAGAACGAAGGTCGTGTACAAAACTCTGAATCCCCATTGGAACCAGACCTTGGAGTTTGCTGATGATGGAAGCTCTTTAGTGTTATATGTGAAAGACCATAATGCTCTATTACCCACATCAAGTATAGGGAATTGTACAGTAGAATATCATGGTTTGCCTCTTAATCAAATGTCTGATGAGTGGATACCCCTTCGAGGGGTGAAAAGTGGCAAAATTCACGTACAAATCACGAGAAAAGTTTCTGAAGTAGATACCCGACTCGGTTTGGAGTCTCAACTATCCATCACCAAAGCTCATCAAATTTCTGGTCAGATGAAGCAGATGATCAACAAGTTTCGAACGCTGATCGAGGACGGTGTTGAAGAACTTTCAACGGCGTTGACGGATTTGGAAGGGCCGGAGGAGATGCAAAGGGAGTATATATTGCAGCTCGAAACCGAGCAAATGCTTCTGCTAAACAAACTGAAGGAGATTGGTGAGGAGATTTTCAATTCATGTCCATCTTTAACTACAAAATCTTCTCCCAATTGA 2547 40.71 MRGGRRGGRRSFKAEEALEFLYQRVVLNPFLLYSISFILVVWAIERWVISFSNWLPLAFAVWATVQYGNYQRHILTEDLTKKWNRIILKTSSITTVEHCEWLNKLLMEVWSSYMNPKLSIRFSSIIEKKLKQRKSRLVERIELLEFSLGTHPPLLGLHGTQWSTCGNQFNKNLVLLFVFQQKIMRLNFDWDTKEMSILLQAKLGRPFIGTARIVINSLHIKGDLLLRPILDGKAILYSFVSTPDVRIGVAFGSGGSQSLPATALPGVSSWLVKIFTDTLVKTMVEPRRRCFSLPAVDLRKTVVGGVIYVTVVSASNLSRNEVRGSPSKQRTNSLNCTQGEYLTKKILETFVEVELGDLSRRTGTRSGSSPVWNSTFNMILHEETEILRFHLYESNSNNVKYDYLTSCEIKVKYVADDSMTIWAIGNGSGVIAKHTECYEKEIEIVVPFEGVSCGEIVSYLCLSDIIHHFLTVRLALKEWQFSGGLYGLNRLRLSSQQFLCGSSNFLPRTGRKINITVVEGKNLIVKDRSGKSDLYVKINYGKVLQKTKTAQSYNPIWNQIFEFDEIGGGEYLKIKCHSEDVFYDDSIGSARVNLEGLVEGLIRDVWIPLEKVSSGELRLQIEAVGADDEEGSMGSSNGWIEIVLIEAKDLVAADLRGTSDPYVRVQYGSLKKRTKVVYKTLNPHWNQTLEFADDGSSLVLYVKDHNALLPTSSIGNCTVEYHGLPLNQMSDEWIPLRGVKSGKIHVQITRKVSEVDTRLGLESQLSITKAHQISGQMKQMINKFRTLIEDGVEELSTALTDLEGPEEMQREYILQLETEQMLLLNKLKEIGEEIFNSCPSLTTKSSPN 848
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 589887 597053 + BLOR06464 Blo15g00070 70470

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00070 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 511 625 IPR035892 -
Blo15g00070 848 ProSiteProfiles C2 domain profile. 499 607 IPR000008 -
Blo15g00070 848 Gene3D C2 domain 498 625 IPR035892 -
Blo15g00070 848 Gene3D C2 domain 626 751 IPR035892 -
Blo15g00070 848 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 95 294 IPR031468 GO:0008289
Blo15g00070 848 ProSiteProfiles C2 domain profile. 613 734 IPR000008 -
Blo15g00070 848 Gene3D C2 domain 297 429 IPR035892 -
Blo15g00070 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 634 749 IPR035892 -
Blo15g00070 848 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 300 417 IPR035892 -
Blo15g00070 848 SMART C2_3c 512 606 IPR000008 -
Blo15g00070 848 SMART C2_3c 639 733 IPR000008 -
Blo15g00070 848 SMART C2_3c 306 423 IPR000008 -
Blo15g00070 848 CDD C2 640 736 - -
Blo15g00070 848 ProSiteProfiles C2 domain profile. 285 423 IPR000008 -
Blo15g00070 848 PANTHER PLANT SYNAPTOTAGMIN 28 843 - -
Blo15g00070 848 CDD C2 307 421 - -
Blo15g00070 848 Pfam C2 domain 640 736 IPR000008 -
Blo15g00070 848 Pfam C2 domain 306 413 IPR000008 -
Blo15g00070 848 Pfam C2 domain 512 609 IPR000008 -
Blo15g00070 848 PANTHER OS01G0128800 PROTEIN 28 843 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00070 - - - jre:109004549 1112.83
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00823 Blo15g00070 CCT
Blo04g00823 Blo15g00070 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00070 Blo-Chr15:589887 Blo01g00613 Blo-Chr1:6772530 5.39E-06 dispersed
Blo15g00070 Blo-Chr15:589887 Blo04g00823 Blo-Chr4:8647564 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g316 Blo04g00823 . Bda06g00806 . . . . . Cmo13g01065 Cmo18g00035 . Cma11g00273 Car10g00217 Car11g00249 . Cpe20g00121 . . . . . . . . . . . . . . . . . Cone13ag0280 . Lsi02g00181 Csa01g00664 Chy12g01439 Cme12g01877 . Blo15g00070 . Bda14g00929 . Bpe15g00523 Bma03g00894 . Sed08g2181 Cmo10g00245 Cmo11g00278 Cma13g01024 Cma18g00042 Car13g00859 Car18g00036 Cpe09g01138 . Bhi08g01232 Tan05g2269 Cmetu12g1130 Lac10g0236 Hepe07g2393 . . Cla04g01093 Cam04g1144 Cec01g1654 Cco01g1703 Clacu04g1172 Cmu04g1153 Cre01g1448 . Csa01g00387 . Cme02g01738
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002821 1 3 2 1 1 1 4 1 2 1 1 2 3 2 2 3 2 1 2 1 2 2 2 2 2 1 2 3 2 2 56
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00070 Blo_Chr15 FPKM 3.683216 3.271557 3.488104 4.218636 7.045817 5.67842 7.516881 3.550292 3.329663 4.176632