Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00073 ATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAAATGAAAATATTAAGGTTAAACCAATTGCATGAAATGGGAGCAAACTCAATCTGCTTACTTGACCCACTCATGGGACTGAAGGGAGCTCCTCCTTTCTTATTCTGCCATCTTCTTCTTCGCGATTTTCCTCTGGTTTTTTCTCTATGCATGATTTCTTCTGCACTGCCCTTTCTCTCCATTTTTTTGTTTTTTGGTGTGAATGACAGGAAGAATCAGGCAGAAGGAGATGGGCAAGAAACCGATGGCAAAGCTTTGATCTTCCCACCTTCGCATTCAAAACTTTCATGGCAGAAACCTGGCATTGCATCAGAACAGCGTGTGCGAGAACACGTGGCCATCAATTGCTCAAATGTAGCTTCTGAAGCCTATGTCTCTAAACGAGCAACAAACAATAATGTTAATCATCGAGCCATTCTGGTTGGGTGGTTGAATAGTGTTTGTCCCAATTCGAACCTATCGAAAGATGCTTCTGATGAGGAGCTTAGAACATGTCTATATGATGGTAATATCTTAGTTCATCTATTGAACATGCTGAAACTTGTCAATGAGGGAGGGGACTTTGCTAATTCAAGAGCTTCACGGTTGGAAAAGCTTACTTGGTTTTTGGCAGCTATCAAGAAAATGGGACTGCCGGGGTTTGCAATTCCAGAGCTTGAGAAGGGAGGATCCTTGAAAAGTGTCATGGATTGCGTATTTGCTCTTAGAGAGCACTATCAGCAAAATTATGGGGAAGATAATACTTTTACGGGAAGCCCAAGTTCTACGGTGGAAAGCCCCTGTGCAGATTCACCTATATTTAGCCAAAGTTCTCCGTTGTCTGGTGAACAGAGGCAGAAAATCTCATCAAAGTCGACATTTCAACGCTCCTTGCTTAGTCCGATCGCCTCAGATCCTTCAGCAGCACCGGTGCATCATGTTGGGCATAAATTTCATGAGGTGTTTCAACTGAAACAAGTTCGCTATGTAGATCTTCCTGCTGCCAAAATTTCTGAGATGATGACATCAAATAGTTTAGATAACGCTCCAACTCAATCTCTTTTGAGCGTTGTTGATGGAATTTTGGATGAAAGCGTTGAAAGAAAGACCGGTGAAATTCCTCATCGAGTGGCATGTCTATTGAGAAAAGTTGTGCAGGAGATTGAGAGGCGTATATCAACTCAGTCAGAACACCTAAGAACTCAAAATAATCTTTTCAAGCCTCGTGAAGAGAAATATCAGTCTCGAATAAGAATCCTGGAAGCCCTTGCAGCCGGTTCAGGTGAAGAGAGTCTGGTTGAGAAAACCAAAGTAGAAGAGAAGAAAAAAATAGAAGGCTATGATTTGATCAAGTTGATTAAAGAAAATGAAGAAAAACAACAAGAGATTTTAGCATTGAAGCAAGAACTGGAAGTTATTAAGAAGACAGATGAGTTGCGCAGCGTGCAAATGGAGACAGAAGCTAAGGAAGTCAAGGCAAAGCTTGAGATGAGATTAAAAGAACTCGGGCGCCTTTTGACTGATTCAAGGAATAAGGTGCAAGATCTAGAGGCATTTTCAGAGTCCAAGTCTCAAAGGTGGAGTACAAAAGAGCATAATTACCAAAGCTTTATAGATTTTCAATCTGGAGCATTACAGGAACTGAGATTCTTCTCTGAGTCTATCAAACAAGAGATTATGAAGACCCAGAGGACCTATTCAGAAGAATTTAATGGCTTAGGAGTAAACCTTAAAGAATTGCTTGATATTGCTGAGAAATACAAAGTTCTTCTTTTGGAAAATAGAAAGATGCTTAATGAGATTCAGGAATTAAAAGGAAATATTCGAGTTTATTGCAGAATAAGACCATTCCTGAACGGCCAAAAAGATAATCGAACAACCATAGAATATGTTGGTGAAAGTGGTGAGTTGGTCATTGCAAACCCCTCCAAATTAGGAAAAGACGGTAATCGGTTATTTAAGTTTAACAAGATCTTCAGTCCGGTAGCTTCCCAAGTTGAAATTTTTTCTGATATCCAACCTTTAATTCAATCTGTTCTTGATGGATATAATGTTTGCATATTTGCTTATGGACAAACTGGCTCAGGAAAGACCTACACAATGATGGGTCCTAATGCTTCGTCAAAAGAAAATTGGGGGGTCAATTATCGAGCCCTTAATGACCTTTTCAACCTTTCCCAAAGTAGAAGAAGCTCCACGATGTTTGAAATAGGAGTTCAAATAGTTGAAATATATAATGAACAACTTGTTTTCCTTAATGTACACACACTTGGGATTATGACACAATCTCAGCCTTACGGGCGAGCCGTTCCAGATGCTAACATGGTCCCTGTGAATTCAACTTCAGACGTTATAGAGTTAATGGACATTGGACTGAAAAACAGGGCAGTTGGTGCGACTGCCCTCAATGAAAGAAGTAGCCGCTCACATAGTGTTGTGACTGTTCATGTACGTGGAACGGATATGAAGACGGCTGCTTCTTTGCATGGTAATCTCCATTTAGTGGATCTTGCTGGAAGTGAAAGGGTGGATAGATCCAAAGTTACTGGCGATAGACTTCGGGAGGCGCAACATATAAACAAATCTTTATCTGCACTTGGAGATGTCATTTTTGCTTTGGCACAGAGAACCTCCCATGTTCCCTATAGAAATAGCAAGCTTACTCAACTTCTCCAAAGCTCTCTGGGTGGTCAAGCGAAGACACTGATGTTTGTCCAACTTAATCCTGATGTCAATTCATATAGTGAATCTTTTAGTACATTGAAATTCGCCGAAAGGGTATCAGGTGTTGAGCTTGGTGCTGCTCGAAGCAGCAAAGAAGGAAGGGACGTTCGAGAATTGATGGATCAGGTCGCTTCTCTTAAAGACACAATATCAAAAAAGGATGATGAGATAGAGCGGTTGCAATTGCTCAAGGATTTTAAAAATGTCTATACGAGTATTAATGGTGAGAAAGAAGGGCCAGGTTTGTGTAAGCATGGAGTCTGTTCCCCGAAGAAAGACACTAATGGTGAAACTCAACGGAGCCAACAGATCCAGACCAATAAAGGCTTAGGTCTTGACGGAAAAGTGCCTTCTGACCAAGACAGCTGGTCCGAGTATACTGATGTGCATTCTGAAGCTGATTCTCAGCAATCAGTGGACGACTTTAAGCACCAAAATGAATTTTTCCTGCAATCAAAGGTCCCCAGAGGAGTAGTAGGTGGCAAAGTTGATGACAATGTATTAAGAATTGTGGATGCAGATTATGATGAGCGATTAGTTGACATATCTGATAGTAATCTTCATGGTCGAGCCGAAAGTGATGCACCTGCAGGAAATTTGATATTTTCTGAGAACTTAGATAAGTACGTCATTACATAA 3375 40.71 MKKKKKKKKKKEMKILRLNQLHEMGANSICLLDPLMGLKGAPPFLFCHLLLRDFPLVFSLCMISSALPFLSIFLFFGVNDRKNQAEGDGQETDGKALIFPPSHSKLSWQKPGIASEQRVREHVAINCSNVASEAYVSKRATNNNVNHRAILVGWLNSVCPNSNLSKDASDEELRTCLYDGNILVHLLNMLKLVNEGGDFANSRASRLEKLTWFLAAIKKMGLPGFAIPELEKGGSLKSVMDCVFALREHYQQNYGEDNTFTGSPSSTVESPCADSPIFSQSSPLSGEQRQKISSKSTFQRSLLSPIASDPSAAPVHHVGHKFHEVFQLKQVRYVDLPAAKISEMMTSNSLDNAPTQSLLSVVDGILDESVERKTGEIPHRVACLLRKVVQEIERRISTQSEHLRTQNNLFKPREEKYQSRIRILEALAAGSGEESLVEKTKVEEKKKIEGYDLIKLIKENEEKQQEILALKQELEVIKKTDELRSVQMETEAKEVKAKLEMRLKELGRLLTDSRNKVQDLEAFSESKSQRWSTKEHNYQSFIDFQSGALQELRFFSESIKQEIMKTQRTYSEEFNGLGVNLKELLDIAEKYKVLLLENRKMLNEIQELKGNIRVYCRIRPFLNGQKDNRTTIEYVGESGELVIANPSKLGKDGNRLFKFNKIFSPVASQVEIFSDIQPLIQSVLDGYNVCIFAYGQTGSGKTYTMMGPNASSKENWGVNYRALNDLFNLSQSRRSSTMFEIGVQIVEIYNEQLVFLNVHTLGIMTQSQPYGRAVPDANMVPVNSTSDVIELMDIGLKNRAVGATALNERSSRSHSVVTVHVRGTDMKTAASLHGNLHLVDLAGSERVDRSKVTGDRLREAQHINKSLSALGDVIFALAQRTSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVNSYSESFSTLKFAERVSGVELGAARSSKEGRDVRELMDQVASLKDTISKKDDEIERLQLLKDFKNVYTSINGEKEGPGLCKHGVCSPKKDTNGETQRSQQIQTNKGLGLDGKVPSDQDSWSEYTDVHSEADSQQSVDDFKHQNEFFLQSKVPRGVVGGKVDDNVLRIVDADYDERLVDISDSNLHGRAESDAPAGNLIFSENLDKYVIT 1124
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 615216 621056 - BLOR06467 Blo15g00073 70473

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00073 1124 SUPERFAMILY Calponin-homology domain, CH-domain 143 253 IPR036872 -
Blo15g00073 1124 ProSiteProfiles Calponin homology (CH) domain profile. 145 251 IPR001715 GO:0005515
Blo15g00073 1124 Coils Coil 1 21 - -
Blo15g00073 1124 Coils Coil 496 516 - -
Blo15g00073 1124 MobiDBLite consensus disorder prediction 256 291 - -
Blo15g00073 1124 SMART kinesin_4 609 942 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 Coils Coil 453 480 - -
Blo15g00073 1124 MobiDBLite consensus disorder prediction 1004 1021 - -
Blo15g00073 1124 MobiDBLite consensus disorder prediction 993 1035 - -
Blo15g00073 1124 Gene3D Kinesin motor domain 553 936 IPR036961 -
Blo15g00073 1124 PANTHER KINESIN-LIKE PROTEIN KLP-3 133 1107 - -
Blo15g00073 1124 Gene3D - 145 261 IPR036872 -
Blo15g00073 1124 Coils Coil 591 611 - -
Blo15g00073 1124 Pfam Kinesin motor domain 617 932 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 972 IPR027417 -
Blo15g00073 1124 PRINTS Kinesin heavy chain signature 804 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 PRINTS Kinesin heavy chain signature 686 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 PRINTS Kinesin heavy chain signature 884 905 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 PRINTS Kinesin heavy chain signature 835 853 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 ProSiteProfiles Kinesin motor domain profile. 611 934 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo15g00073 1124 Gene3D - 451 488 - -
Blo15g00073 1124 Coils Coil 948 975 - -
Blo15g00073 1124 Pfam Calponin homology (CH) domain 148 251 IPR001715 GO:0005515
Blo15g00073 1124 PANTHER KINESIN-4-LIKE ISOFORM X1 133 1107 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00073 K10406 KIFC2_3; kinesin family member C2/C3 - jre:108983676 1129.78
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01110 Blo-Chr2:42104405 Blo15g00073 Blo-Chr15:615216 0 dispersed
Blo11g00525 Blo-Chr11:4862100 Blo15g00073 Blo-Chr15:615216 1.82E-07 dispersed
Blo15g00073 Blo-Chr15:615216 Blo16g00552 Blo-Chr16:22611803 0 dispersed
Blo15g00073 Blo-Chr15:615216 Blo10g00379 Blo-Chr10:6291444 7.75E-07 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g325 . . Bda06g00804 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0285 . . . . . . Blo15g00073 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002869 5 3 4 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 5 1 2 54
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00073 Blo_Chr15 FPKM 4.87234 7.702007 9.045356 6.208834 6.156041 4.40964 5.341775 0.997179 1.864835 1.479261