Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00092 ATGACGTTGGACCAGGAAGAGGAAGGAGAAGAAGATGATGAGAACTCGATGGTGAAATCGAAAATAGAGAATTGTTTTTTAGGACGAGAAGATGTTCAAAAAACTGATAACGTGGAAATTATTTTCAACGACGTACGAAACCATGTCAAAGCTTCCCGGTCCGAGGATTGGAGTTTTGGGGAAATTGTCGGGGAAGACTTTTATAATCCTACCCACGGGACAAGAATGCCTTCTGAGAATTCTAGAAAATCATTCCGACAGGTTCTTAAATCCTGGGGAAGTTTCCTTCAGCTAGCTTCATGCATGATTGCAGTGTCACTTGATCCTTTCTTCTTCTACATCCCTGTCATTAACGATCATGAAAAGTGCTTTCAGTTTGACAAGAAGTTGCGGATGGCAGCTTTGATTTTGCGATTGGTCACAGACGTCTTTTTCATACTTCATATTGCTTTTCGATTTTGTACTGGATATGTTGCGAGTCCCATTCCGTACCACATAGATGGAAGAAATCAAAAAGTAGCTAGCTCTTGGGAAATAGCTAAGACATATATGTTATCTTACTTCTTAATCGACATTCTATCACTTCTCCCCCTCCCTCAGGTAGTAATTTTATCTATTATCCCACGGATGAAAGGCTCAAAATCTTTGATTGCAAGGGACATCCTTACAGCTCTTGTTTTATTACAATATGTTCCCAGATTTGTTCGAATTTACCCATTATACAAGAAACTTACATGGACGCCGAGGATTTTCAAGGGAACTCTTTGGACAAAAGCTGCTTTTAATCTCTTTCTCTACATACTAGCAAGTCATGTACTTGGAGCATTGTGGTACTTCCTTTCCATTGAAAGAGAGATAACATGTTGGCAAGAAGCTTGTGAGGGTCATCCTGGTTGTGATCATAGTTCCTTCTTCTGTGATGATGGGATAAGAGCCACTGAATTCCTTCACGATATGTGTCCCATAGATACTCCGAATACCATTCTTTTTGACTTCGGTATATTCCTGGATGCCCTTCAGTCTGGTATTGTGGAGTCAGTCAATTTACCCCAAAAGCTTTTTCGTTGCCTCTGGTGGGGCCTCCAAAATTTGAGTTCTCTGGGTCAAAACCTCAAAACAAGTACCTATGTCTGGGAGAATATATTTGCAGTTTTTATATCCACCTCTGGTTTGGTTCTATTTTTGTATTTCATTGGAAAAATGCAGACATACATGCAGTTGAAAACTGTAAAAAAAGAGGAGAAGAGGATGGAGATAAGGTCAAAGGCACTAGCTGTTGACTTATGGATGTCCAGCCATCTTCTACCTGAACGTATTAGAAGGAGAATCAAGCATGCTGTAGAAAAGAAATGGCATGAAATCAGAACTGTGGATTCAGAAAATTTGATTCCAATTCTTTCCATGGATCTCCAGAAAGATATAAAACGTTTTCTCTGTTTGGATCTCATTTTGAGAGTTCCAGTTTTGTATGCGATGGATTATCAGTTGTTGGATGCAATGTGTGATCGTCTGAAACCAGTGATCTATTCCACAGAGAGTTACATTGTTCGGAAAGGTGATCCAATTGAGGAAATGTGCTTCATCTACCGCGGCAAGGTATTGTCTTCCTTGATGACTACAATTGTTGGAACGACTGATTCCTATATTTCCATAAAACTACAAACTGGTGACTTCTTTGGAGAAGAACTAGTGACATGGGCTTTCGATGGTGGCTCCTTGACCAATCTCATCTCAAATCGAACCAACCAAGCTCTCACAGAAGTCGAAGCATATGTCCTAATGGCGGAAGATTTGAAATTCTTCATCTCTCGGTTCCAGCGGCTCAACCGCAAGAGCCGCCACATTTTCAGATTCTACTCAGCGCGATGGAGGAATTGGGCAGCTCATGTCATCCAAACAGCATGGCGTTACTACGCCAAAAGGAAGCTCGAAAAATCACTTCGAGAAGAGGAGAGTAGACTGCAAGATGCAATGGCAAAAGCTTGTGGAATATCTACAAGTATAGGTGCTGCCATTTATGTATCTAGATTTACTTCTAAAGCTCTTGGTTTAATCCGAGGTCGGAAGGCCACAGAGGCCAAGATAATTAAGGCCATGCATCTTCAGAAGCCAGTCGAGCCTAACTTTCCAGAGGAGGATAGTGATAGTAGTTAG 2154 41.09 MTLDQEEEGEEDDENSMVKSKIENCFLGREDVQKTDNVEIIFNDVRNHVKASRSEDWSFGEIVGEDFYNPTHGTRMPSENSRKSFRQVLKSWGSFLQLASCMIAVSLDPFFFYIPVINDHEKCFQFDKKLRMAALILRLVTDVFFILHIAFRFCTGYVASPIPYHIDGRNQKVASSWEIAKTYMLSYFLIDILSLLPLPQVVILSIIPRMKGSKSLIARDILTALVLLQYVPRFVRIYPLYKKLTWTPRIFKGTLWTKAAFNLFLYILASHVLGALWYFLSIEREITCWQEACEGHPGCDHSSFFCDDGIRATEFLHDMCPIDTPNTILFDFGIFLDALQSGIVESVNLPQKLFRCLWWGLQNLSSLGQNLKTSTYVWENIFAVFISTSGLVLFLYFIGKMQTYMQLKTVKKEEKRMEIRSKALAVDLWMSSHLLPERIRRRIKHAVEKKWHEIRTVDSENLIPILSMDLQKDIKRFLCLDLILRVPVLYAMDYQLLDAMCDRLKPVIYSTESYIVRKGDPIEEMCFIYRGKVLSSLMTTIVGTTDSYISIKLQTGDFFGEELVTWAFDGGSLTNLISNRTNQALTEVEAYVLMAEDLKFFISRFQRLNRKSRHIFRFYSARWRNWAAHVIQTAWRYYAKRKLEKSLREEESRLQDAMAKACGISTSIGAAIYVSRFTSKALGLIRGRKATEAKIIKAMHLQKPVEPNFPEEDSDSS 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 775799 780143 - BLOR06486 Blo15g00092 70492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00092 717 SMART cnmp_10 488 620 IPR000595 -
Blo15g00092 717 Coils Coil 640 660 - -
Blo15g00092 717 Pfam Ion transport protein 98 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo15g00092 717 ProSiteProfiles cAMP/cGMP binding motif profile. 488 561 IPR000595 -
Blo15g00092 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 89 710 - -
Blo15g00092 717 Gene3D - 101 407 - -
Blo15g00092 717 SUPERFAMILY Voltage-gated potassium channels 95 406 - -
Blo15g00092 717 Gene3D Jelly Rolls 486 607 IPR014710 -
Blo15g00092 717 SUPERFAMILY cAMP-binding domain-like 414 611 IPR018490 -
Blo15g00092 717 ProSiteProfiles IQ motif profile. 624 653 IPR000048 GO:0005515
Blo15g00092 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 89 710 - -
Blo15g00092 717 Gene3D Helix hairpin bin 413 479 - -
Blo15g00092 717 CDD CAP_ED 491 611 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo06g01081 Blo15g00092 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01081 Blo-Chr6:34137623 Blo15g00092 Blo-Chr15:775799 0 dispersed
Blo07g00342 Blo-Chr7:4604952 Blo15g00092 Blo-Chr15:775799 2.54E-93 dispersed
Blo14g00599 Blo-Chr14:10325640 Blo15g00092 Blo-Chr15:775799 3.80E-158 dispersed
Blo14g00625 Blo-Chr14:11893334 Blo15g00092 Blo-Chr15:775799 8.42E-140 dispersed
Blo15g00091 Blo-Chr15:758894 Blo15g00092 Blo-Chr15:775799 4.39E-22 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00092 K05391 - sind:105160375 692.189