Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00093 ATGGATTGCAATAAGGACGAGGCGATCAGGGCTTGGAAAATTGCCGAAAGGAAGTTTAATGAAAAAAATTATTCTGCAGCGAGGAAGTTTTCTTTGAAGGCTCAAAATTTGTATCCTGAGCTCGAAGGGCTCTCTCAAATGATGACAACTCTTGATGTGTATATTGCTGCAGAGAATAAGATTCATGGGGAAATGGATTGGTATGGAATACTTGGTGTAAGCTACTTGGCCGACGAAGAGACAATTCGTAAGCAATATAGGAAGCTGGCCTTAATGCTTCATCCTGACAAAAACAAGTCTCTAGGTGCAGAGGGTGCATTTAAGTTGGTTTCAGAGGCATGGAGTTTATTATCTGACAAGGCAAAGAGGTTACTTTATAATCAGAAAAAAGATATGAAAGAAAATAGCTCAAAGGTTCCTACTCACCATAGTGAAAATGGCTCTCCTAATTTCTCCAGTAATGTACCTACGTATTCGAGGGCTGCAAAGAGTAATATCGGCGGAGGTGCTCCCTCATACAATCCTCCATCACATAGAAAAGCTAACACTTTTTGGACTCTTTGTACTCGGTGTAAGACTCATTATGAATACCTGAGAATATATTTGAATCACACCCTTCTTTGCCCAAATTGTCATGAAGCATTTTTGGCATTGGAAAGGGCCCCCCCTCCAAACGTTTTCAAGTCATCCAACTGGTCTTCTCGCCAACCACATCAAAATTCAAAGCAGAAGGCTGCCAGTGGTAACTCTTATAATTCAGGAAGAAAACATGAAGTTTCTCAAAATTCACATTCAAACTTTCAGTGGGGTCCTTTCTCGAGGACAGATGGCTCTGTTTCATCAGCTTCCACCACTGCTCAAGCTGATTCTGTTGTTCAGCAGGCGAGTGAGAGGGTAAAGAGAGAGCGTGATGAAGCCCAGGGCCAGGTAGCTGCTGATTGGGAGAAGGGTCACGCCTTTTCTTTTAAAAAGACACGAGTAGATGGTAGTCAGAACAATCACGTAAGCCACACAGAAAATCAAATGTCCTGGGGAGATGGAGGACCCGGGATGGGAGGTTTATATGAAGCAAGAAAAGGAGATCTAGAAACACAGCGGACACATTGTTATAATGGTGCCAATGGTAGGTCCATCAGCCAAAGAGAGTTATCTGTTATTGAAATCCGGAAGATGCTAATGGAGAAGGCACAACATGAAATTCGTGAGAAACTTAAAGAATGGAGCACATTGGCCTTTAACAAAGCAAACAAGAAGCCAAAGAACGCGGTCAATGGTGGCCCTTATGCTAAAAGAAGTAATGGTAAATCTGCTGGTAGCGATACAAGACATGAAAACAAGAAGTCTCTTTCAGCTTCCTTAAATGATGATTCAGAGAAAGAAGATAAATTGATGTCCATAAATGTACCAGATCCTGATTTTCACAATTTTGATTTGGACCGCACTGAGAGTTCATTTGAAACTGATCAAGTCTGGGCTGCTTACGATAACGATGATGGAATGCCTCGTTACTATGCTCGAATTCACAAAGTGATCTCCCTAAACCCATTCAAGATGCGAATCAGTTGGCTGAACTCAAGAAGCAATAGCGAATTCGGCCCAGTAGATTGGGTGGGTTCAGGTTTTGTTAAAACCTGTGGAGACTTCAGGATTGGCAGACATGAAATAACAGGGAAGCTAAATTCGTTTTCTCACAAGGTATGTTGGAGAAGAGGTCTGAGAGGGGTCATTCATATATATCCTGGAAAAGGAGAAATCTGGTCCCTTTTTAGGAACTGGTCCCCCAGTTGGAACGAAAATACACCCGACGAAATAGTACATAAATATGATATGGTAGAAGTGGTCAGTGACTATAATGAGGAACAAGGCTTGTCTGTTGTTCCACTTATTAAAGTTGATGGCTTTCGAACTGTGTTTCGGAAGGACATGGATTGCAAGGAAGTCCGAAGTATTCCTAAACACGAGATGTTTCGATTCTCTCATCAGGTCCCAAATTACTTACTCACGGGGCAAGAAGCTCCCAATGCTCCCGAGGGTTGTCGAGAGCTGGATCCAGCAGCTACACCGCTGGATCTCCTCCACATTATAAATGATGCAGCTGATGGATTGGAGAACAACATAGAAAAAGAAGAGATTTCAAAAGCTACTTCAGGGGAGGAACAAATTGTTAATTTAGTTTCGCAGAGTGACGAGGCAGAGGACGCGGGCGTAACACTGGATATTTTTAGGTGA 2229 42.49 MDCNKDEAIRAWKIAERKFNEKNYSAARKFSLKAQNLYPELEGLSQMMTTLDVYIAAENKIHGEMDWYGILGVSYLADEETIRKQYRKLALMLHPDKNKSLGAEGAFKLVSEAWSLLSDKAKRLLYNQKKDMKENSSKVPTHHSENGSPNFSSNVPTYSRAAKSNIGGGAPSYNPPSHRKANTFWTLCTRCKTHYEYLRIYLNHTLLCPNCHEAFLALERAPPPNVFKSSNWSSRQPHQNSKQKAASGNSYNSGRKHEVSQNSHSNFQWGPFSRTDGSVSSASTTAQADSVVQQASERVKRERDEAQGQVAADWEKGHAFSFKKTRVDGSQNNHVSHTENQMSWGDGGPGMGGLYEARKGDLETQRTHCYNGANGRSISQRELSVIEIRKMLMEKAQHEIREKLKEWSTLAFNKANKKPKNAVNGGPYAKRSNGKSAGSDTRHENKKSLSASLNDDSEKEDKLMSINVPDPDFHNFDLDRTESSFETDQVWAAYDNDDGMPRYYARIHKVISLNPFKMRISWLNSRSNSEFGPVDWVGSGFVKTCGDFRIGRHEITGKLNSFSHKVCWRRGLRGVIHIYPGKGEIWSLFRNWSPSWNENTPDEIVHKYDMVEVVSDYNEEQGLSVVPLIKVDGFRTVFRKDMDCKEVRSIPKHEMFRFSHQVPNYLLTGQEAPNAPEGCRELDPAATPLDLLHIINDAADGLENNIEKEEISKATSGEEQIVNLVSQSDEAEDAGVTLDIFR 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 784984 787212 + BLOR06487 Blo15g00093 70493

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00093 742 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Blo15g00093 742 PANTHER HEAT SHOCK PROTEIN-LIKE 1 709 - -
Blo15g00093 742 SMART dnaj_3 65 122 IPR001623 -
Blo15g00093 742 Gene3D DnaJ domain 63 170 IPR036869 -
Blo15g00093 742 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Blo15g00093 742 MobiDBLite consensus disorder prediction 417 460 - -
Blo15g00093 742 MobiDBLite consensus disorder prediction 328 343 - -
Blo15g00093 742 MobiDBLite consensus disorder prediction 141 161 - -
Blo15g00093 742 CDD DnaJ 66 119 IPR001623 -
Blo15g00093 742 Pfam DnaJ domain 66 127 IPR001623 -
Blo15g00093 742 MobiDBLite consensus disorder prediction 328 352 - -
Blo15g00093 742 MobiDBLite consensus disorder prediction 295 311 - -
Blo15g00093 742 MobiDBLite consensus disorder prediction 436 460 - -
Blo15g00093 742 Pfam Domain of unknown function (DUF3444) 465 671 IPR024593 -
Blo15g00093 742 MobiDBLite consensus disorder prediction 131 175 - -
Blo15g00093 742 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Blo15g00093 742 PANTHER BNAC03G44070D PROTEIN 1 709 - -
Blo15g00093 742 MobiDBLite consensus disorder prediction 227 311 - -
Blo15g00093 742 PRINTS DnaJ domain signature 86 101 IPR001623 -
Blo15g00093 742 PRINTS DnaJ domain signature 68 86 IPR001623 -
Blo15g00093 742 PRINTS DnaJ domain signature 102 122 IPR001623 -
Blo15g00093 742 MobiDBLite consensus disorder prediction 227 294 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00093 - - - csv:101216332 900.197
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00434 Blo-Chr13:24565109 Blo15g00093 Blo-Chr15:784984 5.14E-156 dispersed
Blo15g00093 Blo-Chr15:784984 Blo18g00593 Blo-Chr18:9125526 5.54E-109 dispersed
Blo01g00178 Blo-Chr1:2422784 Blo15g00093 Blo-Chr15:784984 0 transposed
Blo02g00492 Blo-Chr2:7366382 Blo15g00093 Blo-Chr15:784984 8.76E-17 transposed
Blo07g00019 Blo-Chr7:379657 Blo15g00093 Blo-Chr15:784984 0 transposed
Blo12g00731 Blo-Chr12:25648738 Blo15g00093 Blo-Chr15:784984 1.61E-29 transposed
Blo13g00191 Blo-Chr13:7783452 Blo15g00093 Blo-Chr15:784984 2.82E-30 transposed
Blo15g00205 Blo-Chr15:2117444 Blo15g00093 Blo-Chr15:784984 0 transposed
Blo15g00093 Blo-Chr15:784984 Blo06g01080 Blo-Chr6:34127547 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g87 . . . . . . . Bma12g01084 . . . . . . . . . . . . . . . . . . . . . . . . Cone16ag0013 . . . . . . . Blo15g00093 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003895 2 1 3 3 3 1 2 1 2 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo15g00093 Blo_Chr15 FPKM 229.855667 244.868134 133.776321 129.544144 116.993393 124.699333 113.07547 67.447655 75.485214 66.713577