Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00111 ATGGAGTTCACCGAAGCTTATAAACAGAGTGGGCCATGCTGTTTTTCTCCTAACTCTCGTTACATTGCTGTCGCCGTTGATTATCGCCTCGTCATTCGCGATACTCACTCATTCAAGGTTGTGCAGTTGTTCTCATGTTTGGACAAGATAAGCTATATTGAATGGGCCCTTGATTCTGAGTACATCCTCTGTGGTTTGCAAAAAAGACTAATAATACAGGCATGGTCGTTGACCCAACCTGAATGGACATGCAAGATAGACGAAGGTCCAGCTGGTATAGCATATGCTAGGTGGAGCCCAGATAGTCGTCACATACTTACCACATCTGAGTTCCAACTGCGATTAACTGTTTGGTCTCTTGTAAACACTGCATGTGTACACGTGCAATGGCCAAAACATACCTCAAAAGGTGTTTGTTTTACTCAGGATGGGAAGTTTGCTGCAATTTGCACTAGGCGTGATTGCAAGGACTATATCAATCTGCTTTCGTGTCATTCATGGGAAAATATGGGTGTTTTTGCTGTTGACACACTAGACTTGGCTGATATTGAATGGTCACCAGATGATAGCGCTATAGTTATATGGGATTCACCACTTGAATACAAGGTTTTAATTTACTCTCCTGATGGGCGGTGTCTATTCAAGTATCAGGCTTATGAAAGTGGACTGGGTGTAAAAACTGTTTCATGGTCACCATGTGGCCAGTTTCTTGCAGTTGGTAGTTATGACCAGATGTTGCGAGTTTTGAATCATCTGACTTGGAAAACTTTTGCTGAGTTCATGCACTTGTCTACTGTTCGAGGACCTTGTTGCACGGCTGTTTTCAAGGAAGTGGAAGAGCCACTGCAACTTGGTATGTCAGACTTATATCTGACAGATGATTTTATGCAAGGCAATAGTGAAAATAGTACAGAAGGGCACGTCGCAGTGAGGTACGAGGTTTCGGAAGTACCCATCACTTTGCCCTTTCAAAAGCCTCCTGCTGACAAACCAAACCCAAAACAAGGGATTGTGGAAGAACAATCTACCATGGCACTCTCCGGGGAAGATTCTGCGACGTTGGACCTTTTTGCCGAGCGTCTCCTTGATGAATTTTCATCCATTGAAGCTTTCTTTGACGACGTCGATCTTTTTCCGAGGGAGAAAATTCGATTCATAGATCCATTAGAGCCTTGCCGAATCCTTCCCGGAGCTTCTAGTTTGAGTCACCGTCGTCCGATGCTAAACGTCGCGATACCTCCAGCTGCTGGATTTTCTGCAAATTCTCAGTCTCATTCGATGGGAGAAGGCGGGGACCAGAACAATGTAGCTCCGCATCTGAGCGAGACGAAGCACTACAGAGGCGTTCGCCGGCGGCCATGGGGGAAGTTCGCAGCTGAGATTCGCGATCCAAAACGAAAAGGCGCGCGAGTGTGGCTCGGCACCTACGAAACAGCCATTGACGCTGCGAGAGCTTACGATAGAGCAGCTTTCGCAATGCGAGGAAGTAAAGCCATCCTGAACTTCCCGCTGGAAGCCGGTAAATGTTCCGACGCAGAGCCGCGGGGGAGAAGTGAGAGAAAAAGGAGTAGAGAGAGTGAGAATGAAGCGGACGAAGTTGCAGAGAGTAAAGTAGTCAAGAAGGAGGAGTCTTTAAAAATGGAGGATACGGTCAGCGAGGGAAGCTCGACGTCCAGCGTTCCGCCGTCGACGCCGTCATGGTGCTCTGCCGTTTGGGGTAACGACGTCAAAGGGATATTTGACGTGCCTCTGTTATCGCCGTTATCTCCTCATCCACTCATGGGTTATTCTCAGCTCAAAGTCACGTAG 1809 47.32 MEFTEAYKQSGPCCFSPNSRYIAVAVDYRLVIRDTHSFKVVQLFSCLDKISYIEWALDSEYILCGLQKRLIIQAWSLTQPEWTCKIDEGPAGIAYARWSPDSRHILTTSEFQLRLTVWSLVNTACVHVQWPKHTSKGVCFTQDGKFAAICTRRDCKDYINLLSCHSWENMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLFKYQAYESGLGVKTVSWSPCGQFLAVGSYDQMLRVLNHLTWKTFAEFMHLSTVRGPCCTAVFKEVEEPLQLGMSDLYLTDDFMQGNSENSTEGHVAVRYEVSEVPITLPFQKPPADKPNPKQGIVEEQSTMALSGEDSATLDLFAERLLDEFSSIEAFFDDVDLFPREKIRFIDPLEPCRILPGASSLSHRRPMLNVAIPPAAGFSANSQSHSMGEGGDQNNVAPHLSETKHYRGVRRRPWGKFAAEIRDPKRKGARVWLGTYETAIDAARAYDRAAFAMRGSKAILNFPLEAGKCSDAEPRGRSERKRSRESENEADEVAESKVVKKEESLKMEDTVSEGSSTSSVPPSTPSWCSAVWGNDVKGIFDVPLLSPLSPHPLMGYSQLKVT 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 921240 927699 - BLOR06505 Blo15g00111 70511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00111 602 SMART WD40_4 209 250 IPR001680 GO:0005515
Blo15g00111 602 SMART WD40_4 77 119 IPR001680 GO:0005515
Blo15g00111 602 PRINTS Ethylene responsive element binding protein signature 485 505 IPR001471 GO:0003700|GO:0006355
Blo15g00111 602 PRINTS Ethylene responsive element binding protein signature 446 457 IPR001471 GO:0003700|GO:0006355
Blo15g00111 602 MobiDBLite consensus disorder prediction 419 438 - -
Blo15g00111 602 Pfam AP2 domain 445 495 IPR001471 GO:0003700|GO:0006355
Blo15g00111 602 SUPERFAMILY DNA-binding domain 445 504 IPR016177 GO:0003677
Blo15g00111 602 MobiDBLite consensus disorder prediction 510 549 - -
Blo15g00111 602 Gene3D - 132 278 IPR015943 GO:0005515
Blo15g00111 602 ProSiteProfiles AP2/ERF domain profile. 445 503 IPR001471 GO:0003700|GO:0006355
Blo15g00111 602 MobiDBLite consensus disorder prediction 550 564 - -
Blo15g00111 602 CDD AP2 444 503 IPR001471 GO:0003700|GO:0006355
Blo15g00111 602 Gene3D AP2/ERF domain 444 505 IPR036955 GO:0003700|GO:0006355
Blo15g00111 602 SUPERFAMILY WD40 repeat-like 13 262 IPR036322 GO:0005515
Blo15g00111 602 PANTHER WD REPEAT PROTEIN 8-RELATED 1 338 - -
Blo15g00111 602 SMART rav1_2 445 509 IPR001471 GO:0003700|GO:0006355
Blo15g00111 602 MobiDBLite consensus disorder prediction 508 564 - -
Blo15g00111 602 Gene3D - 7 119 IPR015943 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00109 Blo-Chr15:909288 Blo15g00111 Blo-Chr15:921240 1.95E-77 dispersed
Blo15g00111 Blo-Chr15:921240 Blo03g00146 Blo-Chr3:3972006 1.61E-28 dispersed
Blo15g00110 Blo-Chr15:912768 Blo15g00111 Blo-Chr15:921240 4.48E-153 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13299 PF00847 AP2 7.40E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00111 K25164 - twl:119985793 647.121