Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00114 ATGCAGCGATATCAAGCCCTCTCCACCATCAACCAGGCTGTTATTCAGCCAAGAACAAGCTCCGCTGAAGGAAGCTATTCTACATGCCAAGCTGTGGATATGGGAGCTAGGAAGGATGATGGCGTTGGCTCTGCTGATGGCAAAAATGCTTTGAGTAGCTTCTCTAGGTGGAACAGCTTGACAATTGATGATTTCTCACAGGTTTCTGATCAAGCTTCCTCTTCGGATGTGCTCAGTCGTCGATCCTGCGAAAGTCAGGAAAAGGTTAACTTTGAGCTCGAAAAGCTGAGAATCGAACTGAGACATGCGCGAGGAATGTTCGCGCTTGCTCAAAAGGAGGCTATTGATGCTTCTCGAACGGCGCATAATCTGAGTAGAGTACGATTGGAAGAAGCTACAAAGCTCAAGGATGTTAGCATTAAGGAGGAGGAAGCCAAAGAATTGGCTGATCAAGCGAGAGAGAAATCTGAAGCTGTTCAAAGAGAAGCCATTTTGACGAGAGAAAGAGCTGAAGTAGAGGCCTCGCAGAGGAGAGTAGCAGAGGCTGCCGCCTTGCGGGATAAAAGAGAGAAAGAAAAGCTTCAGAGCGCTCTAATGGGGCCATTGCAGAAATACCAAGTATTTTCATGGGAAGAGATCGTGGCTTCTACTTCGTCTTTCTCGGTGGATCTCAAGATCGGAATCGGAGCTTATGGAACAGTTTACAAATGTAATTTACGGAACACAGTTGCAGCCGTGAAGGTTCTTCATTCTAGCGAGAGTAAAAAGAACAAGCAATTCTTGCAGGAGCTTGAAATCTTGAGCAAAATTCATCATCCGCATTTGATTCTTCTTCTCGGAGCATGTCCAGATCAAGGCTGCCTAGTTTACGAGTATATGGAGAACGGAAGCTTGGAAGATCGATTGGTTCGAAAAGACGATACGCCTCCCATCCCTTGGTTTGACAGATTTCGAATCGCCTGGGAAGTCGCTTCAGCTCTTGTTTTTCTTCACAACTCGAAGCCAAAGCCTATCGTTCATCGCGATCTCAAACCGACCAACATTTTGCTCGATCGTAACCTCGTGAGCAAGATCGGAGACGTAGGGCTTTCGACGGTGATAAATTCAGACACATTTCCCGTTTCCCGCAAGGAAACCGGACTAGTCGGAACTCTTTGTTACATAGATCCAGAGTATCAAAGGAGCGGTGAAATTTCTCCGGAATCCGATGTCTACGCTTTCGGAATCGTGATTTTGCAGCTTCTTACTGCTAAACCAGCAATGGCATTGGCTTATCTTATGGAAAATGAGCTCAGAGATGGAAACTTGATGAAGATTTTAGATCCAGAGGCGGGAAATTGGCCGGTCGAAGAGACGAAGCAATTGGCCGAGTTGGGACTGAATTGCGCAGAGCTTCGTCGGAAAGATCGGCCGGATTTGAGGGATGGAGTTCTTCCTGTACTTGAGAAATTGAAAATGGCCGCTGATCGAGCTCGTAGCTCCTGCTCTAGCTTACCATCTGCAACTCCTAACCATTTCATCTGCCCCATTCTCAAGTGTGTAATGAGCGATCCTTGTGTTGCTTCGGACGGATACACCTACGATCGGCGGGCGATAGAGAAGTGGCTTCGAGAGGAAGATAAATCACCGATGACGAATTTGCCCTTGCCGGACAAAACTTTAATACCTAATTACACTCTTCTATCTGCAATAATTGAATGGAAGTCCATTACAAGCTGA 1719 46.48 MQRYQALSTINQAVIQPRTSSAEGSYSTCQAVDMGARKDDGVGSADGKNALSSFSRWNSLTIDDFSQVSDQASSSDVLSRRSCESQEKVNFELEKLRIELRHARGMFALAQKEAIDASRTAHNLSRVRLEEATKLKDVSIKEEEAKELADQAREKSEAVQREAILTRERAEVEASQRRVAEAAALRDKREKEKLQSALMGPLQKYQVFSWEEIVASTSSFSVDLKIGIGAYGTVYKCNLRNTVAAVKVLHSSESKKNKQFLQELEILSKIHHPHLILLLGACPDQGCLVYEYMENGSLEDRLVRKDDTPPIPWFDRFRIAWEVASALVFLHNSKPKPIVHRDLKPTNILLDRNLVSKIGDVGLSTVINSDTFPVSRKETGLVGTLCYIDPEYQRSGEISPESDVYAFGIVILQLLTAKPAMALAYLMENELRDGNLMKILDPEAGNWPVEETKQLAELGLNCAELRRKDRPDLRDGVLPVLEKLKMAADRARSSCSSLPSATPNHFICPILKCVMSDPCVASDGYTYDRRAIEKWLREEDKSPMTNLPLPDKTLIPNYTLLSAIIEWKSITS 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 948612 951345 - BLOR06508 Blo15g00114 70514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00114 572 SUPERFAMILY RING/U-box 489 568 - -
Blo15g00114 572 PANTHER OS02G0152300 PROTEIN 45 568 - -
Blo15g00114 572 CDD RING-Ubox_WDSUB1_like 506 546 - -
Blo15g00114 572 ProSitePatterns Protein kinases ATP-binding region signature. 226 247 IPR017441 GO:0005524
Blo15g00114 572 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 45 568 - -
Blo15g00114 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Blo15g00114 572 Pfam U-box domain 503 568 IPR003613 GO:0004842|GO:0016567
Blo15g00114 572 Coils Coil 135 162 - -
Blo15g00114 572 Gene3D Transferase(Phosphotransferase) domain 1 293 498 - -
Blo15g00114 572 Coils Coil 93 113 - -
Blo15g00114 572 Gene3D Phosphorylase Kinase; domain 1 199 292 - -
Blo15g00114 572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 501 571 IPR013083 -
Blo15g00114 572 ProSiteProfiles U-box domain profile. 501 572 IPR003613 GO:0004842|GO:0016567
Blo15g00114 572 SMART Ubox_2 505 567 IPR003613 GO:0004842|GO:0016567
Blo15g00114 572 SUPERFAMILY Protein kinase-like (PK-like) 201 475 IPR011009 -
Blo15g00114 572 SMART serkin_6 220 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00114 572 Pfam Protein kinase domain 222 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo15g00114 572 ProSiteProfiles Protein kinase domain profile. 220 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo15g00114 Blo-Chr15:948612 Blo18g00275 Blo-Chr18:2912519 2.79E-116 dispersed
Blo15g00114 Blo-Chr15:948612 Blo16g00977 Blo-Chr16:38034996 4.78E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84705 PF00069 Pkinase 2.50E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00114 - - jre:109002487 747.273