Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo15g00152 ATGAGAGGGAGAGATCGGGACGCCCCGGAGAGCGAGCGAGCGCCGGTGTGCAAGCGGCGAGAGCGGGCAAGCGACGGCGACGGGGGGTCCGACGTGTGCGACGTCCAGCGATGCGAGGTGGAACGGTTGTCTCCTGCCGACAGTGAAGGAATTGATGAGGAGGTTGTAGGTGGTGGACAATTGAAGAAGTTGTCGGGTGTTGATTCGCAGAAGATGGTGAGAGGAAAAATCCAGATGAAAAAGATTGAAAATGCTAGTAGTAGGCAAGTAACCTTTTCCAAAAGAAGAAATGGACTGCTGAAGAAAGCTTATGAGCTGTCTGTGCTATGTGATGCTGAAGTCGCTGTTATCCTTTTCTCTCAGAAAGGCAGACTCTTTGAATTTTCAAGCTCTGACCTGCAAAAGACAATAGAACGCTACCGGAAGTACGCAGGCGATCGTCGGAGCGAGAAGGCTGACATGCTCTCCATCGAGCAAAGGAAGCATGAAATTGCTGCCATTGTTAAACAGATTGAGCAAATTGAAGATTCAAAAAGAAAGCTTATGGGACATGGACTGGAAACTTGTTCCCATGAAGAGCTGCAGAAGATTGAAGAACAGTTGGAGAGGAGCCTATCTTCCATCAGGAAAAGAAAGGCTCAGCTGTTCATGGAGCAAATAGAGCAACTAAGAGCAAAGGATAGACTTCTTTTAGAAGAAAATGCAAACTTATCTGCGCAGTTGCTGAAGAGGACACTAGAGAGAACGCTGGAAGGGCTGCTAGAGAGGCTGCTAGAGAAGATGATGGAGGGGCTGCTCGTTGCCCAATTCTTTACAATTCAGCCAATATCTCATAATGGTTCTCTGCTGCTCTCTCCTCCATTCTTTGCATTTGGAGTAGTCCCATTTGATGGTGCTTCTCCATTATTTGCATTTTGTGCAGCTCCATTTGATGTAGCTCCTCCATCTGTACAAGTCAGTCCTCCATCCTTCGGACTTGAGCCAACACCATTTCATGCCGCTCCTCTGCTTGCTCCTCCATTTTTCTCATCCAACTGA 1038 47.88 MRGRDRDAPESERAPVCKRRERASDGDGGSDVCDVQRCEVERLSPADSEGIDEEVVGGGQLKKLSGVDSQKMVRGKIQMKKIENASSRQVTFSKRRNGLLKKAYELSVLCDAEVAVILFSQKGRLFEFSSSDLQKTIERYRKYAGDRRSEKADMLSIEQRKHEIAAIVKQIEQIEDSKRKLMGHGLETCSHEELQKIEEQLERSLSSIRKRKAQLFMEQIEQLRAKDRLLLEENANLSAQLLKRTLERTLEGLLERLLEKMMEGLLVAQFFTIQPISHNGSLLLSPPFFAFGVVPFDGASPLFAFCAAPFDVAPPSVQVSPPSFGLEPTPFHAAPLLAPPFFSSN 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1517856 1529250 - BLOR06546 Blo15g00152 70552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo15g00152 345 SMART madsneu2 72 131 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 Coils Coil 191 214 - -
Blo15g00152 345 ProSiteProfiles MADS-box domain profile. 72 132 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 PANTHER MADS BOX PROTEIN 72 245 - -
Blo15g00152 345 ProSitePatterns MADS-box domain signature. 74 128 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 PRINTS MADS domain signature 74 94 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 PRINTS MADS domain signature 94 109 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 PRINTS MADS domain signature 109 130 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 ProSiteProfiles K-box domain profile. 157 247 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo15g00152 345 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 81 128 IPR002100 GO:0003677|GO:0046983
Blo15g00152 345 PANTHER MADS-BOX PROTEIN SOC1 72 245 - -
Blo15g00152 345 Coils Coil 220 240 - -
Blo15g00152 345 CDD MADS_MEF2_like 74 149 IPR033896 GO:0000977|GO:0045944
Blo15g00152 345 MobiDBLite consensus disorder prediction 1 32 - -
Blo15g00152 345 Gene3D - 84 165 IPR036879 GO:0003677|GO:0046983
Blo15g00152 345 Coils Coil 157 177 - -
Blo15g00152 345 Pfam K-box region 158 241 IPR002487 GO:0003700|GO:0005634|GO:0006355
Blo15g00152 345 SUPERFAMILY SRF-like 74 148 IPR036879 GO:0003677|GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00444 Blo15g00152 CCT
Blo07g00444 Blo15g00152 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00509 Blo-Chr6:27132126 Blo15g00152 Blo-Chr15:1517856 4.23E-24 dispersed
Blo13g00307 Blo-Chr13:16489462 Blo15g00152 Blo-Chr15:1517856 2.20E-34 dispersed
Blo15g00152 Blo-Chr15:1517856 Blo18g00414 Blo-Chr18:4509735 1.38E-39 dispersed
Blo01g00141 Blo-Chr1:1918103 Blo15g00152 Blo-Chr15:1517856 4.05E-43 transposed
Blo13g00422 Blo-Chr13:24274860 Blo15g00152 Blo-Chr15:1517856 4.22E-11 transposed
Blo19g00299 Blo-Chr19:19015024 Blo15g00152 Blo-Chr15:1517856 8.01E-42 transposed
Blo15g00152 Blo-Chr15:1517856 Blo06g01107 Blo-Chr6:34467292 4.29E-17 wgd
Blo15g00152 Blo-Chr15:1517856 Blo07g00444 Blo-Chr7:8918142 1.07E-64 wgd
Blo15g00152 Blo-Chr15:1517856 Blo09g00120 Blo-Chr9:2848890 2.93E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13300 PF01486 K-box 4.30E-23 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo15g00152 - - sind:105179249 219.164